RNA–Protein interactions for RNA: ENST00000609477.5

HDDC2-209, Transcript of HD domain containing 2, humanhuman

TSL 4

Gene HDDC2, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-209ENST00000609477 IQSEC2Q5JU85 1478 aa21.15■□□□□ 0.98
HDDC2-209ENST00000609477 KIF1BO60333 1816 aa21.15■□□□□ 0.98
HDDC2-209ENST00000609477 CLTCL1P53675 1640 aa21.15■□□□□ 0.98
HDDC2-209ENST00000609477 ZNF335Q9H4Z2 1342 aaPredicted RBP21.14■□□□□ 0.97
HDDC2-209ENST00000609477 CPS1P31327 1500 aa21.13■□□□□ 0.97
HDDC2-209ENST00000609477 PLEKHG1Q9ULL1 1385 aa21.12■□□□□ 0.97
HDDC2-209ENST00000609477 PPP1R15AO75807 674 aaPredicted RBP21.11■□□□□ 0.97
HDDC2-209ENST00000609477 FBXO41Q8TF61 875 aa21.1■□□□□ 0.97
HDDC2-209ENST00000609477 CCDC144AA2RUR9 1427 aa21.09■□□□□ 0.97
HDDC2-209ENST00000609477 ZNF326Q5BKZ1 582 aaKnown RBP21.08■□□□□ 0.97
HDDC2-209ENST00000609477 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
HDDC2-209ENST00000609477 FOXD1Q16676 465 aa21.07■□□□□ 0.96
HDDC2-209ENST00000609477 BCANQ96GW7 911 aa21.05■□□□□ 0.96
HDDC2-209ENST00000609477 TBX22Q9Y458 520 aa21.05■□□□□ 0.96
HDDC2-209ENST00000609477 DIP2AQ14689 1571 aa21.04■□□□□ 0.96
HDDC2-209ENST00000609477 TRIM26Q12899 539 aaPredicted RBP21.03■□□□□ 0.96
HDDC2-209ENST00000609477 NEXMIFQ5QGS0 1516 aa21.03■□□□□ 0.96
HDDC2-209ENST00000609477 VGFO15240 615 aaPredicted RBP21.02■□□□□ 0.96
HDDC2-209ENST00000609477 SLC26A8Q96RN1 970 aa21.02■□□□□ 0.96
HDDC2-209ENST00000609477 PIK3R4Q99570 1358 aa21.01■□□□□ 0.95
HDDC2-209ENST00000609477 KCNA6P17658 529 aa21.01■□□□□ 0.95
HDDC2-209ENST00000609477 ILDR1Q86SU0 546 aaPredicted RBP21■□□□□ 0.95
HDDC2-209ENST00000609477 SETBP1Q9Y6X0 1596 aa20.99■□□□□ 0.95
HDDC2-209ENST00000609477 SPATA31E1Q6ZUB1 1445 aa20.99■□□□□ 0.95
HDDC2-209ENST00000609477 STRCP1A6NGW2 1772 aa20.99■□□□□ 0.95
HDDC2-209ENST00000609477 ANKRD30BQ9BXX2 1392 aa20.98■□□□□ 0.95
HDDC2-209ENST00000609477 ADAMTS13Q76LX8 1427 aa20.98■□□□□ 0.95
HDDC2-209ENST00000609477 NUTM2DQ5VT03 806 aaPredicted RBP20.98■□□□□ 0.95
HDDC2-209ENST00000609477 NWD1Q149M9 1564 aa20.97■□□□□ 0.95
HDDC2-209ENST00000609477 PPLO60437 1756 aa20.96■□□□□ 0.95
HDDC2-209ENST00000609477 LRRC7Q96NW7 1537 aa20.96■□□□□ 0.95
HDDC2-209ENST00000609477 CHD2O14647 1828 aaKnown RBP20.96■□□□□ 0.95
HDDC2-209ENST00000609477 NKTRP30414 1462 aaKnown RBP20.95■□□□□ 0.94
HDDC2-209ENST00000609477 NRXN3Q9Y4C0 1643 aa20.93■□□□□ 0.94
HDDC2-209ENST00000609477 RGL3Q3MIN7 710 aa20.91■□□□□ 0.94
HDDC2-209ENST00000609477 IFT172Q9UG01 1749 aa20.9■□□□□ 0.94
HDDC2-209ENST00000609477 TOM1O60784 492 aa20.9■□□□□ 0.94
HDDC2-209ENST00000609477 NCOA3Q9Y6Q9 1424 aa20.89■□□□□ 0.94
HDDC2-209ENST00000609477 STAC3Q96MF2 364 aa20.89■□□□□ 0.93
HDDC2-209ENST00000609477 UBAP1LF5GYI3 381 aa20.88■□□□□ 0.93
HDDC2-209ENST00000609477 PROSER2Q86WR7 435 aaPredicted RBP20.88■□□□□ 0.93
HDDC2-209ENST00000609477 SENP3Q9H4L4 574 aaPredicted RBP20.87■□□□□ 0.93
HDDC2-209ENST00000609477 TMEM94Q12767 1356 aa20.85■□□□□ 0.93
HDDC2-209ENST00000609477 XIRP1Q702N8 1843 aaKnown RBP20.85■□□□□ 0.93
HDDC2-209ENST00000609477 AMOTL2Q9Y2J4 779 aa20.85■□□□□ 0.93
HDDC2-209ENST00000609477 ALKQ9UM73 1620 aa20.84■□□□□ 0.93
HDDC2-209ENST00000609477 METP08581 1390 aa20.84■□□□□ 0.93
HDDC2-209ENST00000609477 MYOM2P54296 1465 aa20.83■□□□□ 0.93
HDDC2-209ENST00000609477 ADGRF5Q8IZF2 1346 aa20.82■□□□□ 0.92
HDDC2-209ENST00000609477 SETD1AO15047 1707 aaKnown RBP20.82■□□□□ 0.92
HDDC2-209ENST00000609477 XRN1Q8IZH2 1706 aaKnown RBP20.82■□□□□ 0.92
HDDC2-209ENST00000609477 PTPRUQ92729 1446 aa20.82■□□□□ 0.92
HDDC2-209ENST00000609477 PIK3C2GO75747 1445 aa20.81■□□□□ 0.92
HDDC2-209ENST00000609477 NRXN1Q9ULB1 1477 aa20.81■□□□□ 0.92
HDDC2-209ENST00000609477 PRAG1Q86YV5 1406 aa20.8■□□□□ 0.92
HDDC2-209ENST00000609477 MSH6P52701 1360 aa20.79■□□□□ 0.92
HDDC2-209ENST00000609477 LAMC1P11047 1609 aa20.77■□□□□ 0.92
HDDC2-209ENST00000609477 C19orf44Q9H6X5 657 aa20.76■□□□□ 0.91
HDDC2-209ENST00000609477 C14orf93Q9H972 538 aaKnown RBP20.76■□□□□ 0.91
HDDC2-209ENST00000609477 PTCH1Q13635 1447 aa20.75■□□□□ 0.91
HDDC2-209ENST00000609477 DHX57Q6P158 1386 aaKnown RBP20.74■□□□□ 0.91
HDDC2-209ENST00000609477 DCAF11Q8TEB1 546 aa20.74■□□□□ 0.91
HDDC2-209ENST00000609477 DCCP43146 1447 aa20.72■□□□□ 0.91
HDDC2-209ENST00000609477 C14orf37Q86TY3 774 aa20.72■□□□□ 0.91
HDDC2-209ENST00000609477 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
HDDC2-209ENST00000609477 PIP4K2BP78356 416 aa20.71■□□□□ 0.91
HDDC2-209ENST00000609477 CADPS2Q86UW7 1296 aa20.71■□□□□ 0.91
HDDC2-209ENST00000609477 ABCC11Q96J66 1382 aa20.71■□□□□ 0.91
HDDC2-209ENST00000609477 TECPR2O15040 1411 aa20.7■□□□□ 0.9
HDDC2-209ENST00000609477 LRPPRCP42704 1394 aaKnown RBP20.7■□□□□ 0.9
HDDC2-209ENST00000609477 FAM135BQ49AJ0 1406 aa20.7■□□□□ 0.9
HDDC2-209ENST00000609477 SCAF1Q9H7N4 1312 aaKnown RBP20.69■□□□□ 0.9
HDDC2-209ENST00000609477 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.69■□□□□ 0.9
HDDC2-209ENST00000609477 ATF3P18847 181 aa20.68■□□□□ 0.9
HDDC2-209ENST00000609477 SIRT1Q96EB6 747 aa20.68■□□□□ 0.9
HDDC2-209ENST00000609477 SLAIN2Q9P270 581 aa20.68■□□□□ 0.9
HDDC2-209ENST00000609477 KDM2AQ9Y2K7 1162 aa20.68■□□□□ 0.9
HDDC2-209ENST00000609477 KNDC1Q76NI1 1749 aa20.67■□□□□ 0.9
HDDC2-209ENST00000609477 CFAP70Q5T0N1 1121 aa20.67■□□□□ 0.9
HDDC2-209ENST00000609477 ADGRL3Q9HAR2 1447 aa20.67■□□□□ 0.9
HDDC2-209ENST00000609477 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
HDDC2-209ENST00000609477 YTHDC2Q9H6S0 1430 aaKnown RBP20.66■□□□□ 0.9
HDDC2-209ENST00000609477 ASXL1Q8IXJ9 1541 aa20.66■□□□□ 0.9
HDDC2-209ENST00000609477 TMEM132EQ6IEE7 984 aa20.64■□□□□ 0.89
HDDC2-209ENST00000609477 SIN3AQ96ST3 1273 aa20.62■□□□□ 0.89
HDDC2-209ENST00000609477 KIAA1210Q9ULL0 1709 aa20.61■□□□□ 0.89
HDDC2-209ENST00000609477 ADGRB1O14514 1584 aa20.61■□□□□ 0.89
HDDC2-209ENST00000609477 STK26Q9P289 416 aa20.61■□□□□ 0.89
HDDC2-209ENST00000609477 NALCNQ8IZF0 1738 aa20.61■□□□□ 0.89
HDDC2-209ENST00000609477 DLC1Q96QB1 1528 aa20.6■□□□□ 0.89
HDDC2-209ENST00000609477 HSPA1LP34931 641 aa20.6■□□□□ 0.89
HDDC2-209ENST00000609477 PCGF6Q9BYE7 350 aa20.6■□□□□ 0.89
HDDC2-209ENST00000609477 ROBO1Q9Y6N7 1651 aa20.6■□□□□ 0.89
HDDC2-209ENST00000609477 NEUROD1Q13562 356 aa20.59■□□□□ 0.89
HDDC2-209ENST00000609477 L3MBTL2Q969R5 705 aa20.59■□□□□ 0.89
HDDC2-209ENST00000609477 MST1RQ04912 1400 aa20.56■□□□□ 0.88
HDDC2-209ENST00000609477 WAPLQ7Z5K2 1190 aa20.55■□□□□ 0.88
HDDC2-209ENST00000609477 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
HDDC2-209ENST00000609477 CLSPNQ9HAW4 1339 aa20.54■□□□□ 0.88
HDDC2-209ENST00000609477 PRAM1Q96QH2 718 aa20.51■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms