RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 B4GALNT3Q6L9W6 998 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 PAIP2Q9BPZ3 127 aaKnown RBP5.95□□□□□ -1.46
HDDC2-208ENST00000609021 DISP1Q96F81 1524 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 ADCY10Q96PN6 1610 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 ZBTB22O15209 634 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 TRHP20396 242 aaPredicted RBP5.95□□□□□ -1.46
HDDC2-208ENST00000609021 SATB1Q01826 763 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 MYH16Q9H6N6 1097 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 LOC102724159A0A0B4J2E5 919 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 TRIM6-TRIM34B2RNG4 842 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 MPHOSPH10O00566 681 aaKnown RBP5.95□□□□□ -1.46
HDDC2-208ENST00000609021 PWP2Q15269 919 aaKnown RBP5.95□□□□□ -1.46
HDDC2-208ENST00000609021 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.95□□□□□ -1.46
HDDC2-208ENST00000609021 KCTD17Q8N5Z5 321 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 TRIM34Q9BYJ4 488 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 KIAA0556O60303 1618 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 MAGI3Q5TCQ9 1506 aa5.95□□□□□ -1.46
HDDC2-208ENST00000609021 POLD1P28340 1107 aa5.94□□□□□ -1.46
HDDC2-208ENST00000609021 MAP3K1Q13233 1512 aa5.94□□□□□ -1.46
HDDC2-208ENST00000609021 GAPVD1Q14C86 1478 aa5.94□□□□□ -1.46
HDDC2-208ENST00000609021 SLC20A2Q08357 652 aa5.94□□□□□ -1.46
HDDC2-208ENST00000609021 RGL3Q3MIN7 710 aa5.94□□□□□ -1.46
HDDC2-208ENST00000609021 TMC1Q8TDI8 760 aa5.94□□□□□ -1.46
HDDC2-208ENST00000609021 MYCBPQ99417 103 aaPredicted RBP5.94□□□□□ -1.46
HDDC2-208ENST00000609021 NUP160Q12769 1436 aa5.94□□□□□ -1.46
HDDC2-208ENST00000609021 EFCAB5A4FU69 1503 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 TDO2P48775 406 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 NBPF6Q5VWK0 638 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 NBPF5PQ86XG9 351 aaPredicted RBP5.93□□□□□ -1.46
HDDC2-208ENST00000609021 ZBTB9Q96C00 473 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 NBPF4Q96M43 638 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 CEP83Q9Y592 693 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 CEP162Q5TB80 1403 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 KIF27Q86VH2 1401 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 ANP32CO43423 234 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 MSNP26038 577 aaKnown RBP5.93□□□□□ -1.46
HDDC2-208ENST00000609021 GTF2A1P52655 376 aaPredicted RBP5.93□□□□□ -1.46
HDDC2-208ENST00000609021 NECTIN2Q92692 538 aa5.93□□□□□ -1.46
HDDC2-208ENST00000609021 CCDC94Q9BW85 323 aaPredicted RBP5.93□□□□□ -1.46
HDDC2-208ENST00000609021 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.92□□□□□ -1.46
HDDC2-208ENST00000609021 IRX5P78411 483 aaPredicted RBP5.92□□□□□ -1.46
HDDC2-208ENST00000609021 EP400NLQ6ZTU2 488 aa5.92□□□□□ -1.46
HDDC2-208ENST00000609021 OTUD6BQ8N6M0 293 aa5.92□□□□□ -1.46
HDDC2-208ENST00000609021 ZSCAN20P17040 1043 aaPredicted RBP5.92□□□□□ -1.46
HDDC2-208ENST00000609021 TIGD1Q96MW7 591 aa5.92□□□□□ -1.46
HDDC2-208ENST00000609021 GRIN2BQ13224 1484 aa5.92□□□□□ -1.46
HDDC2-208ENST00000609021 MAGI1Q96QZ7 1491 aaPredicted RBP5.92□□□□□ -1.46
HDDC2-208ENST00000609021 FOXD4L5Q5VV16 416 aaPredicted RBP5.92□□□□□ -1.46
HDDC2-208ENST00000609021 FOXD4L4Q8WXT5 416 aaPredicted RBP5.92□□□□□ -1.46
HDDC2-208ENST00000609021 KIF3AQ9Y496 699 aa5.92□□□□□ -1.46
HDDC2-208ENST00000609021 IQGAP2Q13576 1575 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 IRF6O14896 467 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 PRR29P0C7W0 189 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 PIK3R5Q8WYR1 880 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 NRDCO43847 1150 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 RINLQ6ZS11 566 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 AQRO60306 1485 aaKnown RBP eCLIP5.91□□□□□ -1.46
HDDC2-208ENST00000609021 TNNT1P13805 278 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 TERF1P54274 439 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 EXOC8Q8IYI6 725 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 EFCC1Q9HA90 598 aa5.91□□□□□ -1.46
HDDC2-208ENST00000609021 CBX1P83916 185 aa5.9□□□□□ -1.46
HDDC2-208ENST00000609021 RNF217Q8TC41 542 aa5.9□□□□□ -1.46
HDDC2-208ENST00000609021 UPF2Q9HAU5 1272 aaKnown RBP5.9□□□□□ -1.46
HDDC2-208ENST00000609021 SPINK5Q9NQ38 1064 aaPredicted RBP5.9□□□□□ -1.46
HDDC2-208ENST00000609021 RAI14Q9P0K7 980 aa5.9□□□□□ -1.46
HDDC2-208ENST00000609021 GRIN2AQ12879 1464 aa5.9□□□□□ -1.46
HDDC2-208ENST00000609021 TIAM1Q13009 1591 aa5.9□□□□□ -1.46
HDDC2-208ENST00000609021 ERCC6L2Q5T890 1561 aa5.9□□□□□ -1.46
HDDC2-208ENST00000609021 CCDC172P0C7W6 258 aa5.9□□□□□ -1.47
HDDC2-208ENST00000609021 SMC4Q9NTJ3 1288 aa5.9□□□□□ -1.47
HDDC2-208ENST00000609021 ABCA8O94911 1581 aa5.9□□□□□ -1.47
HDDC2-208ENST00000609021 HDAC1Q13547 482 aaPredicted RBP5.9□□□□□ -1.47
HDDC2-208ENST00000609021 CCDC97Q96F63 343 aaPredicted RBP5.9□□□□□ -1.47
HDDC2-208ENST00000609021 R3HCC1Q9Y3T6 440 aaKnown RBP5.9□□□□□ -1.47
HDDC2-208ENST00000609021 CROCC2H7BZ55 1655 aa5.89□□□□□ -1.47
HDDC2-208ENST00000609021 STK26Q9P289 416 aa5.89□□□□□ -1.47
HDDC2-208ENST00000609021 DYNC1I1O14576 645 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 ZNF853P0CG23 659 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 CALCOCO1Q9P1Z2 691 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 CTR9Q6PD62 1173 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 CALR3Q96L12 384 aaKnown RBP5.88□□□□□ -1.47
HDDC2-208ENST00000609021 SYNJ2O15056 1496 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 UQCRHLA0A096LP55 91 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 FRAT2O75474 233 aaPredicted RBP5.88□□□□□ -1.47
HDDC2-208ENST00000609021 UQCRHP07919 91 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 NOL8Q76FK4 1167 aaKnown RBP5.88□□□□□ -1.47
HDDC2-208ENST00000609021 MNS1Q8NEH6 495 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 MTMR7Q9Y216 660 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 FHAD1B1AJZ9 1412 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 CLIP1P30622 1438 aa5.88□□□□□ -1.47
HDDC2-208ENST00000609021 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.87□□□□□ -1.47
HDDC2-208ENST00000609021 U3KPZ7 1027 aaPredicted RBP5.87□□□□□ -1.47
HDDC2-208ENST00000609021 CAPN15O75808 1086 aa5.87□□□□□ -1.47
HDDC2-208ENST00000609021 ZKSCAN8Q15776 578 aaPredicted RBP5.87□□□□□ -1.47
HDDC2-208ENST00000609021 SPTY2D1Q68D10 685 aaPredicted RBP5.87□□□□□ -1.47
HDDC2-208ENST00000609021 NCAPGQ9BPX3 1015 aa5.87□□□□□ -1.47
HDDC2-208ENST00000609021 CDC42BPAQ5VT25 1732 aa5.87□□□□□ -1.47
HDDC2-208ENST00000609021 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.86□□□□□ -1.47
HDDC2-208ENST00000609021 SUDS3Q9H7L9 328 aaPredicted RBP5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms