RNA–Protein interactions for RNA: ENST00000608853.5

ATXN2-226, Transcript of ataxin 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATXN2, Length 4,376 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-226ENST00000608853 PRKCSHP14314 528 aaPredicted RBP15.22■□□□□ 0.03
ATXN2-226ENST00000608853 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.21■□□□□ 0.036e-7■■■□□ 17.1
ATXN2-226ENST00000608853 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.21■□□□□ 0.03
ATXN2-226ENST00000608853 PDZRN3Q9UPQ7 1066 aa15.21■□□□□ 0.03
ATXN2-226ENST00000608853 C11orf95C9JLR9 678 aaPredicted RBP15.21■□□□□ 0.03
ATXN2-226ENST00000608853 HDGFP51858 240 aaKnown RBP15.21■□□□□ 0.03
ATXN2-226ENST00000608853 ATP6V1DQ9Y5K8 247 aa15.21■□□□□ 0.03
ATXN2-226ENST00000608853 RILPL2Q969X0 211 aa15.21■□□□□ 0.02
ATXN2-226ENST00000608853 BCAR3O75815 825 aa15.2■□□□□ 0.02
ATXN2-226ENST00000608853 MCTP1Q6DN14 999 aa15.2■□□□□ 0.02
ATXN2-226ENST00000608853 GAPVD1Q14C86 1478 aa15.2■□□□□ 0.02
ATXN2-226ENST00000608853 RIPK4P57078 832 aa15.2■□□□□ 0.02
ATXN2-226ENST00000608853 EVC2Q86UK5 1308 aa15.19■□□□□ 0.02
ATXN2-226ENST00000608853 NAIPQ13075 1403 aa15.19■□□□□ 0.02
ATXN2-226ENST00000608853 GPATCH3Q96I76 525 aa15.19■□□□□ 0.02
ATXN2-226ENST00000608853 CHMP4AQ9BY43 222 aa15.19■□□□□ 0.02
ATXN2-226ENST00000608853 NBPF1Q3BBV0 1214 aa15.18■□□□□ 0.02
ATXN2-226ENST00000608853 TCP11L2Q8N4U5 519 aa15.18■□□□□ 0.02
ATXN2-226ENST00000608853 API5Q9BZZ5 524 aaKnown RBP15.18■□□□□ 0.02
ATXN2-226ENST00000608853 GNL2Q13823 731 aaKnown RBP15.18■□□□□ 0.02
ATXN2-226ENST00000608853 R3HCC1Q9Y3T6 440 aaKnown RBP15.17■□□□□ 0.02
ATXN2-226ENST00000608853 STAC3Q96MF2 364 aa15.17■□□□□ 0.02
ATXN2-226ENST00000608853 TNNT3P45378 269 aaPredicted RBP15.17■□□□□ 0.02
ATXN2-226ENST00000608853 TPM4P67936 248 aa15.17■□□□□ 0.02
ATXN2-226ENST00000608853 DIAPH1O60610 1272 aaKnown RBP15.16■□□□□ 0.02
ATXN2-226ENST00000608853 MLECQ14165 292 aa15.16■□□□□ 0.02
ATXN2-226ENST00000608853 KIAA1107Q9UPP5 1409 aa15.16■□□□□ 0.02
ATXN2-226ENST00000608853 HDAC5Q9UQL6 1122 aa15.16■□□□□ 0.02
ATXN2-226ENST00000608853 INTS3Q68E01 1043 aaKnown RBP15.15■□□□□ 0.02
ATXN2-226ENST00000608853 ISY1Q9ULR0 285 aaKnown RBP15.15■□□□□ 0.02
ATXN2-226ENST00000608853 TPM2P07951 284 aa15.15■□□□□ 0.02
ATXN2-226ENST00000608853 MAP7D2Q96T17 732 aa15.15■□□□□ 0.02
ATXN2-226ENST00000608853 TOP2BQ02880 1626 aa15.15■□□□□ 0.02
ATXN2-226ENST00000608853 HSP90B1P14625 803 aaKnown RBP15.14■□□□□ 0.01
ATXN2-226ENST00000608853 MCM4P33991 863 aa15.14■□□□□ 0.01
ATXN2-226ENST00000608853 SKAP1Q86WV1 359 aa15.14■□□□□ 0.01
ATXN2-226ENST00000608853 CDC45O75419 566 aa15.13■□□□□ 0.01
ATXN2-226ENST00000608853 ANO2Q9NQ90 1003 aa15.13■□□□□ 0.01
ATXN2-226ENST00000608853 MTHFSP49914 203 aa15.13■□□□□ 0.01
ATXN2-226ENST00000608853 CAVIN1Q6NZI2 390 aaKnown RBP15.13■□□□□ 0.01
ATXN2-226ENST00000608853 GRPEL1Q9HAV7 217 aa15.12■□□□□ 0.01
ATXN2-226ENST00000608853 GOLGA6L19H0YKK7 550 aa15.12■□□□□ 0.01
ATXN2-226ENST00000608853 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
ATXN2-226ENST00000608853 RNF214Q8ND24 703 aa15.12■□□□□ 0.01
ATXN2-226ENST00000608853 EFCAB5A4FU69 1503 aa15.11■□□□□ 0.01
ATXN2-226ENST00000608853 ESPNB1AK53 854 aa15.11■□□□□ 0.01
ATXN2-226ENST00000608853 MTERF4Q7Z6M4 381 aaKnown RBP15.11■□□□□ 0.01
ATXN2-226ENST00000608853 CCDC173Q0VFZ6 552 aa15.11■□□□□ 0.01
ATXN2-226ENST00000608853 PKNOX2Q96KN3 472 aa15.11■□□□□ 0.01
ATXN2-226ENST00000608853 BECN2A8MW95 431 aa15.1■□□□□ 0.01
ATXN2-226ENST00000608853 KIF3AQ9Y496 699 aa15.1■□□□□ 0.01
ATXN2-226ENST00000608853 NCAPD3P42695 1498 aa15.1■□□□□ 0.01
ATXN2-226ENST00000608853 PTPRGP23470 1445 aa15.1■□□□□ 0.01
ATXN2-226ENST00000608853 CCDC39Q9UFE4 941 aa15.1■□□□□ 0.01
ATXN2-226ENST00000608853 C20orf194Q5TEA3 1177 aa15.09■□□□□ 0.01
ATXN2-226ENST00000608853 ZNF771Q7L3S4 317 aaPredicted RBP15.09■□□□□ 0.01
ATXN2-226ENST00000608853 EHBP1L1Q8N3D4 1523 aa15.09■□□□□ 0.01
ATXN2-226ENST00000608853 MINK1Q8N4C8 1332 aaPredicted RBP15.09■□□□□ 0.01
ATXN2-226ENST00000608853 NCOA1Q15788 1441 aa15.08■□□□□ 0.01
ATXN2-226ENST00000608853 ROCK1Q13464 1354 aa15.08■□□□□ 0.01
ATXN2-226ENST00000608853 NINLQ9Y2I6 1382 aa15.08■□□□□ 0.01
ATXN2-226ENST00000608853 SF3A1Q15459 793 aaKnown RBP15.08■□□□□ 0.01
ATXN2-226ENST00000608853 GNAI1P63096 354 aa15.08■□□□□ 0
ATXN2-226ENST00000608853 EXOSC9Q06265 439 aaKnown RBP15.08■□□□□ 0
ATXN2-226ENST00000608853 ZNF592Q92610 1267 aa15.08■□□□□ 0
ATXN2-226ENST00000608853 DIAPH3Q9NSV4 1193 aa15.08■□□□□ 0
ATXN2-226ENST00000608853 MBD3O95983 291 aa15.07■□□□□ 0
ATXN2-226ENST00000608853 CHMP3Q9Y3E7 222 aa15.07■□□□□ 0
ATXN2-226ENST00000608853 H3BQV1 296 aa15.07■□□□□ 0
ATXN2-226ENST00000608853 IFFO2Q5TF58 517 aa15.07■□□□□ 0
ATXN2-226ENST00000608853 COG3Q96JB2 828 aa15.07■□□□□ 0
ATXN2-226ENST00000608853 AMPHP49418 695 aa15.07■□□□□ 0
ATXN2-226ENST00000608853 SLFN5Q08AF3 891 aa15.06■□□□□ 0
ATXN2-226ENST00000608853 GGNBP2Q9H3C7 697 aa15.06■□□□□ 0
ATXN2-226ENST00000608853 RRP9O43818 475 aaKnown RBP15.06■□□□□ 0
ATXN2-226ENST00000608853 PRPF40AO75400 957 aaKnown RBP15.06■□□□□ 0
ATXN2-226ENST00000608853 RABEP1Q15276 862 aa15.06■□□□□ 0
ATXN2-226ENST00000608853 ZKSCAN1P17029 563 aaPredicted RBP15.06■□□□□ 0
ATXN2-226ENST00000608853 FAM184AQ8NB25 1140 aa15.05■□□□□ 0
ATXN2-226ENST00000608853 ANKRD30BQ9BXX2 1392 aa15.05■□□□□ 0
ATXN2-226ENST00000608853 RUFY2Q8WXA3 655 aa15.05■□□□□ -0
ATXN2-226ENST00000608853 RBM10P98175 930 aaKnown RBP15.05■□□□□ -0
ATXN2-226ENST00000608853 CFAP70Q5T0N1 1121 aa15.05■□□□□ -0
ATXN2-226ENST00000608853 SMC3Q9UQE7 1217 aa15.05■□□□□ -0
ATXN2-226ENST00000608853 CCDC34Q96HJ3 373 aa15.04■□□□□ -0
ATXN2-226ENST00000608853 CIZ1Q9ULV3 898 aaPredicted RBP15.04■□□□□ -0
ATXN2-226ENST00000608853 VPS37CA5D8V6 355 aaPredicted RBP15.04■□□□□ -0
ATXN2-226ENST00000608853 MVPQ14764 893 aaKnown RBP15.04■□□□□ -0
ATXN2-226ENST00000608853 TSR2Q969E8 191 aaKnown RBP15.03■□□□□ -0
ATXN2-226ENST00000608853 MAP3K1Q13233 1512 aa15.03■□□□□ -0
ATXN2-226ENST00000608853 NUTM2FA1L443 756 aa15.03■□□□□ -0
ATXN2-226ENST00000608853 HMOX1P09601 288 aa15.03■□□□□ -0
ATXN2-226ENST00000608853 GCC1Q96CN9 775 aa15.03■□□□□ -0
ATXN2-226ENST00000608853 K7ELQ4 463 aaPredicted RBP15.02■□□□□ -0
ATXN2-226ENST00000608853 NEK4P51957 841 aa15.02■□□□□ -0
ATXN2-226ENST00000608853 GORABQ5T7V8 394 aa15.02■□□□□ -0
ATXN2-226ENST00000608853 WDR63Q8IWG1 891 aa15.02■□□□□ -0
ATXN2-226ENST00000608853 GOLGA6L1Q8N7Z2 621 aa15.02■□□□□ -0
ATXN2-226ENST00000608853 BICD2Q8TD16 824 aa15.02■□□□□ -0
ATXN2-226ENST00000608853 DAPK1P53355 1430 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms