RNA–Protein interactions for RNA: ENST00000608369.1

LINC00963-211, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 961 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-211ENST00000608369 RGS17Q9UGC6 210 aaPredicted RBP17.31■□□□□ 0.36
LINC00963-211ENST00000608369 SLC26A8Q96RN1 970 aa17.3■□□□□ 0.36
LINC00963-211ENST00000608369 PLEKHG1Q9ULL1 1385 aa17.29■□□□□ 0.36
LINC00963-211ENST00000608369 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.28■□□□□ 0.36
LINC00963-211ENST00000608369 ANKRD50Q9ULJ7 1429 aa17.28■□□□□ 0.36
LINC00963-211ENST00000608369 BCANQ96GW7 911 aa17.27■□□□□ 0.36
LINC00963-211ENST00000608369 SLAIN2Q9P270 581 aa17.27■□□□□ 0.36
LINC00963-211ENST00000608369 CHIC2Q9UKJ5 165 aa17.27■□□□□ 0.36
LINC00963-211ENST00000608369 ZFYVE9O95405 1425 aa17.27■□□□□ 0.35
LINC00963-211ENST00000608369 JCADQ9P266 1359 aa17.27■□□□□ 0.35
LINC00963-211ENST00000608369 PIK3R4Q99570 1358 aa17.26■□□□□ 0.35
LINC00963-211ENST00000608369 PPP1R15AO75807 674 aaPredicted RBP17.25■□□□□ 0.35
LINC00963-211ENST00000608369 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
LINC00963-211ENST00000608369 DIP2AQ14689 1571 aa17.24■□□□□ 0.35
LINC00963-211ENST00000608369 CHD2O14647 1828 aaKnown RBP17.24■□□□□ 0.35
LINC00963-211ENST00000608369 GCC2Q8IWJ2 1684 aa17.23■□□□□ 0.35
LINC00963-211ENST00000608369 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
LINC00963-211ENST00000608369 PHLPP1O60346 1717 aa17.22■□□□□ 0.35
LINC00963-211ENST00000608369 SPATA31A6Q5VVP1 1343 aa17.21■□□□□ 0.35
LINC00963-211ENST00000608369 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
LINC00963-211ENST00000608369 POTEAQ6S8J7 498 aa17.21■□□□□ 0.35
LINC00963-211ENST00000608369 CADPS2Q86UW7 1296 aa17.21■□□□□ 0.35
LINC00963-211ENST00000608369 UNC13BO14795 1591 aa17.19■□□□□ 0.34
LINC00963-211ENST00000608369 ROCK1Q13464 1354 aa17.18■□□□□ 0.34
LINC00963-211ENST00000608369 FAM50AQ14320 339 aaKnown RBP17.18■□□□□ 0.34
LINC00963-211ENST00000608369 C19orf44Q9H6X5 657 aa17.18■□□□□ 0.34
LINC00963-211ENST00000608369 TRIM26Q12899 539 aaPredicted RBP17.17■□□□□ 0.34
LINC00963-211ENST00000608369 ZNF772Q68DY9 489 aaPredicted RBP17.17■□□□□ 0.34
LINC00963-211ENST00000608369 ATF3P18847 181 aa17.16■□□□□ 0.34
LINC00963-211ENST00000608369 C14orf37Q86TY3 774 aa17.16■□□□□ 0.34
LINC00963-211ENST00000608369 RBM33Q96EV2 1170 aaKnown RBP17.16■□□□□ 0.34
LINC00963-211ENST00000608369 COL16A1Q07092 1604 aaPredicted RBP17.16■□□□□ 0.34
LINC00963-211ENST00000608369 DCCP43146 1447 aa17.15■□□□□ 0.34
LINC00963-211ENST00000608369 AHDC1Q5TGY3 1603 aaPredicted RBP17.15■□□□□ 0.34
LINC00963-211ENST00000608369 MYO5BQ9ULV0 1848 aa17.15■□□□□ 0.34
LINC00963-211ENST00000608369 TRPM2O94759 1503 aa17.15■□□□□ 0.34
LINC00963-211ENST00000608369 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
LINC00963-211ENST00000608369 IQGAP3Q86VI3 1631 aa17.13■□□□□ 0.33
LINC00963-211ENST00000608369 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
LINC00963-211ENST00000608369 E9PCH4 1651 aa17.11■□□□□ 0.33
LINC00963-211ENST00000608369 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.11■□□□□ 0.33
LINC00963-211ENST00000608369 CHGAP10645 457 aaKnown RBP17.11■□□□□ 0.33
LINC00963-211ENST00000608369 MEX3CQ5U5Q3 659 aaKnown RBP17.11■□□□□ 0.33
LINC00963-211ENST00000608369 CDK12Q9NYV4 1490 aaPredicted RBP17.07■□□□□ 0.32
LINC00963-211ENST00000608369 AMOTL2Q9Y2J4 779 aa17.07■□□□□ 0.32
LINC00963-211ENST00000608369 NUP155O75694 1391 aa17.06■□□□□ 0.32
LINC00963-211ENST00000608369 SETBP1Q9Y6X0 1596 aa17.06■□□□□ 0.32
LINC00963-211ENST00000608369 LRP6O75581 1613 aa17.05■□□□□ 0.32
LINC00963-211ENST00000608369 SETD5Q9C0A6 1442 aa17.04■□□□□ 0.32
LINC00963-211ENST00000608369 BRINP3Q76B58 766 aa17.04■□□□□ 0.32
LINC00963-211ENST00000608369 RXRBP28702 533 aa17.03■□□□□ 0.32
LINC00963-211ENST00000608369 SETD1AO15047 1707 aaKnown RBP17.02■□□□□ 0.32
LINC00963-211ENST00000608369 XRN1Q8IZH2 1706 aaKnown RBP17.02■□□□□ 0.32
LINC00963-211ENST00000608369 LRRC59Q96AG4 307 aaKnown RBP17.02■□□□□ 0.32
LINC00963-211ENST00000608369 ASXL1Q8IXJ9 1541 aa17.01■□□□□ 0.31
LINC00963-211ENST00000608369 SPHKAPQ2M3C7 1700 aa16.99■□□□□ 0.31
LINC00963-211ENST00000608369 PTPRUQ92729 1446 aa16.99■□□□□ 0.31
LINC00963-211ENST00000608369 NUTM2DQ5VT03 806 aaPredicted RBP16.99■□□□□ 0.31
LINC00963-211ENST00000608369 UPF1Q92900 1129 aaKnown RBP eCLIP16.99■□□□□ 0.312e-6■■■■□ 19.9
LINC00963-211ENST00000608369 MST1RQ04912 1400 aa16.98■□□□□ 0.31
LINC00963-211ENST00000608369 NHSL1Q5SYE7 1610 aa16.98■□□□□ 0.31
LINC00963-211ENST00000608369 NRXN3Q9Y4C0 1643 aa16.98■□□□□ 0.31
LINC00963-211ENST00000608369 ADGRL3Q9HAR2 1447 aa16.97■□□□□ 0.31
LINC00963-211ENST00000608369 PCGF6Q9BYE7 350 aa16.97■□□□□ 0.31
LINC00963-211ENST00000608369 ZNF326Q5BKZ1 582 aaKnown RBP16.96■□□□□ 0.31
LINC00963-211ENST00000608369 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
LINC00963-211ENST00000608369 AFF2P51816 1311 aa16.94■□□□□ 0.3
LINC00963-211ENST00000608369 METP08581 1390 aa16.93■□□□□ 0.3
LINC00963-211ENST00000608369 PTCH1Q13635 1447 aa16.93■□□□□ 0.3
LINC00963-211ENST00000608369 NUTM2BA6NNL0 878 aaPredicted RBP16.92■□□□□ 0.3
LINC00963-211ENST00000608369 NUTM2EB1AL46 878 aaPredicted RBP16.92■□□□□ 0.3
LINC00963-211ENST00000608369 RBM6P78332 1123 aaKnown RBP16.92■□□□□ 0.3
LINC00963-211ENST00000608369 FOXD1Q16676 465 aa16.92■□□□□ 0.3
LINC00963-211ENST00000608369 NUTM2AQ8IVF1 878 aaPredicted RBP16.92■□□□□ 0.3
LINC00963-211ENST00000608369 PRAG1Q86YV5 1406 aa16.92■□□□□ 0.3
LINC00963-211ENST00000608369 VGFO15240 615 aaPredicted RBP16.91■□□□□ 0.3
LINC00963-211ENST00000608369 NGLY1Q96IV0 654 aa16.91■□□□□ 0.3
LINC00963-211ENST00000608369 LAMC1P11047 1609 aa16.91■□□□□ 0.3
LINC00963-211ENST00000608369 NEXMIFQ5QGS0 1516 aa16.91■□□□□ 0.3
LINC00963-211ENST00000608369 PNPLA6Q8IY17 1366 aa16.9■□□□□ 0.3
LINC00963-211ENST00000608369 KIF1BO60333 1816 aa16.89■□□□□ 0.29
LINC00963-211ENST00000608369 RPGRIP1LQ68CZ1 1315 aa16.89■□□□□ 0.29
LINC00963-211ENST00000608369 C1orf167Q5SNV9 1468 aa16.88■□□□□ 0.29
LINC00963-211ENST00000608369 NALCNQ8IZF0 1738 aa16.87■□□□□ 0.29
LINC00963-211ENST00000608369 C8orf37Q96NL8 207 aa16.87■□□□□ 0.29
LINC00963-211ENST00000608369 QTRT2Q9H974 415 aaKnown RBP16.87■□□□□ 0.29
LINC00963-211ENST00000608369 CLTCL1P53675 1640 aa16.86■□□□□ 0.29
LINC00963-211ENST00000608369 ITGAEP38570 1179 aa16.86■□□□□ 0.29
LINC00963-211ENST00000608369 HFM1A2PYH4 1435 aa16.86■□□□□ 0.29
LINC00963-211ENST00000608369 SOS2Q07890 1332 aaPredicted RBP16.85■□□□□ 0.29
LINC00963-211ENST00000608369 RGS12O14924 1447 aa16.85■□□□□ 0.29
LINC00963-211ENST00000608369 ATAD2Q6PL18 1390 aa16.84■□□□□ 0.29
LINC00963-211ENST00000608369 TRPC5Q9UL62 973 aaPredicted RBP16.83■□□□□ 0.28
LINC00963-211ENST00000608369 NAIPQ13075 1403 aa16.8■□□□□ 0.28
LINC00963-211ENST00000608369 RRBP1Q9P2E9 1410 aaKnown RBP16.8■□□□□ 0.28
LINC00963-211ENST00000608369 SRCAPQ6ZRS2 3230 aa16.8■□□□□ 0.28
LINC00963-211ENST00000608369 NPHP3Q7Z494 1330 aa16.8■□□□□ 0.28
LINC00963-211ENST00000608369 FNBP4Q8N3X1 1017 aaPredicted RBP16.8■□□□□ 0.28
LINC00963-211ENST00000608369 COL22A1Q8NFW1 1626 aaPredicted RBP16.8■□□□□ 0.28
LINC00963-211ENST00000608369 LRPPRCP42704 1394 aaKnown RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms