RNA–Protein interactions for RNA: ENST00000608287.1

SGMS1-208, Transcript of sphingomyelin synthase 1, humanhuman

TSL 4

Gene SGMS1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-208ENST00000608287 SLC52A1Q9NWF4 448 aa29.79■■■□□ 2.36
SGMS1-208ENST00000608287 NCOA3Q9Y6Q9 1424 aa29.79■■■□□ 2.36
SGMS1-208ENST00000608287 HDGFP51858 240 aaKnown RBP29.78■■■□□ 2.36
SGMS1-208ENST00000608287 RRP7BPQ9NSQ0 103 aa29.78■■■□□ 2.36
SGMS1-208ENST00000608287 COL16A1Q07092 1604 aaPredicted RBP29.78■■■□□ 2.36
SGMS1-208ENST00000608287 RBM33Q96EV2 1170 aaKnown RBP29.77■■■□□ 2.36
SGMS1-208ENST00000608287 UPF1Q92900 1129 aaKnown RBP eCLIP29.75■■■□□ 2.35
SGMS1-208ENST00000608287 NOS1P29475 1434 aa29.74■■■□□ 2.35
SGMS1-208ENST00000608287 CHD2O14647 1828 aaKnown RBP29.73■■■□□ 2.35
SGMS1-208ENST00000608287 ABCC5O15440 1437 aa29.73■■■□□ 2.35
SGMS1-208ENST00000608287 PLEKHG1Q9ULL1 1385 aa29.71■■■□□ 2.35
SGMS1-208ENST00000608287 ANKRD30AQ9BXX3 1397 aa29.7■■■□□ 2.35
SGMS1-208ENST00000608287 SHPRHQ149N8 1683 aa29.69■■■□□ 2.34
SGMS1-208ENST00000608287 PPP1R15AO75807 674 aaPredicted RBP29.69■■■□□ 2.34
SGMS1-208ENST00000608287 DAPK1P53355 1430 aa29.69■■■□□ 2.34
SGMS1-208ENST00000608287 RPRD2Q5VT52 1461 aaKnown RBP29.68■■■□□ 2.34
SGMS1-208ENST00000608287 PTPN23Q9H3S7 1636 aa29.68■■■□□ 2.34
SGMS1-208ENST00000608287 C14orf37Q86TY3 774 aa29.68■■■□□ 2.34
SGMS1-208ENST00000608287 CADPS2Q86UW7 1296 aa29.68■■■□□ 2.34
SGMS1-208ENST00000608287 AHDC1Q5TGY3 1603 aaPredicted RBP29.67■■■□□ 2.34
SGMS1-208ENST00000608287 TRIM52Q96A61 297 aa29.67■■■□□ 2.34
SGMS1-208ENST00000608287 CDK12Q9NYV4 1490 aaPredicted RBP29.67■■■□□ 2.34
SGMS1-208ENST00000608287 LRP6O75581 1613 aa29.67■■■□□ 2.34
SGMS1-208ENST00000608287 RXRBP28702 533 aa29.65■■■□□ 2.34
SGMS1-208ENST00000608287 ZFYVE9O95405 1425 aa29.63■■■□□ 2.33
SGMS1-208ENST00000608287 ATF3P18847 181 aa29.62■■■□□ 2.33
SGMS1-208ENST00000608287 TBX22Q9Y458 520 aa29.62■■■□□ 2.33
SGMS1-208ENST00000608287 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.61■■■□□ 2.33
SGMS1-208ENST00000608287 C19orf44Q9H6X5 657 aa29.61■■■□□ 2.33
SGMS1-208ENST00000608287 RIMS2Q9UQ26 1411 aa29.6■■■□□ 2.33
SGMS1-208ENST00000608287 DIP2AQ14689 1571 aa29.6■■■□□ 2.33
SGMS1-208ENST00000608287 PIK3R4Q99570 1358 aa29.59■■■□□ 2.33
SGMS1-208ENST00000608287 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.57■■■□□ 2.32
SGMS1-208ENST00000608287 GCC2Q8IWJ2 1684 aa29.56■■■□□ 2.32
SGMS1-208ENST00000608287 MYO5BQ9ULV0 1848 aa29.55■■■□□ 2.32
SGMS1-208ENST00000608287 TMEM131LA2VDJ0 1609 aa29.53■■■□□ 2.32
SGMS1-208ENST00000608287 PPARGC1BQ86YN6 1023 aaKnown RBP29.51■■■□□ 2.31
SGMS1-208ENST00000608287 CHIC2Q9UKJ5 165 aa29.5■■■□□ 2.31
SGMS1-208ENST00000608287 DCCP43146 1447 aa29.5■■■□□ 2.31
SGMS1-208ENST00000608287 FAM50AQ14320 339 aaKnown RBP29.48■■■□□ 2.31
SGMS1-208ENST00000608287 FOXD1Q16676 465 aa29.48■■■□□ 2.31
SGMS1-208ENST00000608287 ADGRL2O95490 1459 aa29.48■■■□□ 2.31
SGMS1-208ENST00000608287 TRPM2O94759 1503 aa29.47■■■□□ 2.31
SGMS1-208ENST00000608287 AFF2P51816 1311 aa29.45■■■□□ 2.31
SGMS1-208ENST00000608287 NUTM2BA6NNL0 878 aaPredicted RBP29.45■■■□□ 2.31
SGMS1-208ENST00000608287 NUTM2EB1AL46 878 aaPredicted RBP29.45■■■□□ 2.31
SGMS1-208ENST00000608287 NUTM2AQ8IVF1 878 aaPredicted RBP29.45■■■□□ 2.31
SGMS1-208ENST00000608287 ADAMTS13Q76LX8 1427 aa29.45■■■□□ 2.3
SGMS1-208ENST00000608287 BRINP3Q76B58 766 aa29.44■■■□□ 2.3
SGMS1-208ENST00000608287 SETD5Q9C0A6 1442 aa29.44■■■□□ 2.3
SGMS1-208ENST00000608287 ANKRD50Q9ULJ7 1429 aa29.43■■■□□ 2.3
SGMS1-208ENST00000608287 CHGAP10645 457 aaKnown RBP29.41■■■□□ 2.3
SGMS1-208ENST00000608287 LRRC59Q96AG4 307 aaKnown RBP29.41■■■□□ 2.3
SGMS1-208ENST00000608287 ASXL1Q8IXJ9 1541 aa29.4■■■□□ 2.3
SGMS1-208ENST00000608287 RBM6P78332 1123 aaKnown RBP29.4■■■□□ 2.3
SGMS1-208ENST00000608287 NHSL1Q5SYE7 1610 aa29.38■■■□□ 2.29
SGMS1-208ENST00000608287 AMOTL2Q9Y2J4 779 aa29.37■■■□□ 2.29
SGMS1-208ENST00000608287 RGS12O14924 1447 aa29.36■■■□□ 2.29
SGMS1-208ENST00000608287 NGLY1Q96IV0 654 aa29.35■■■□□ 2.29
SGMS1-208ENST00000608287 QTRT2Q9H974 415 aaKnown RBP29.33■■■□□ 2.29
SGMS1-208ENST00000608287 ATAD2Q6PL18 1390 aa29.32■■■□□ 2.28
SGMS1-208ENST00000608287 NUTM2DQ5VT03 806 aaPredicted RBP29.32■■■□□ 2.28
SGMS1-208ENST00000608287 C8orf37Q96NL8 207 aa29.32■■■□□ 2.28
SGMS1-208ENST00000608287 UNC13BO14795 1591 aa29.3■■■□□ 2.28
SGMS1-208ENST00000608287 MST1RQ04912 1400 aa29.3■■■□□ 2.28
SGMS1-208ENST00000608287 XRN1Q8IZH2 1706 aaKnown RBP29.28■■■□□ 2.28
SGMS1-208ENST00000608287 E9PCH4 1651 aa29.28■■■□□ 2.28
SGMS1-208ENST00000608287 PTPRUQ92729 1446 aa29.26■■■□□ 2.27
SGMS1-208ENST00000608287 PNPLA6Q8IY17 1366 aa29.26■■■□□ 2.27
SGMS1-208ENST00000608287 SETBP1Q9Y6X0 1596 aa29.23■■■□□ 2.27
SGMS1-208ENST00000608287 ZRANB1Q9UGI0 708 aa29.23■■■□□ 2.27
SGMS1-208ENST00000608287 ADGRL3Q9HAR2 1447 aa29.2■■■□□ 2.27
SGMS1-208ENST00000608287 IQGAP3Q86VI3 1631 aa29.2■■■□□ 2.27
SGMS1-208ENST00000608287 ITGAEP38570 1179 aa29.2■■■□□ 2.26
SGMS1-208ENST00000608287 TRPC5Q9UL62 973 aaPredicted RBP29.17■■■□□ 2.26
SGMS1-208ENST00000608287 NRXN3Q9Y4C0 1643 aa29.16■■■□□ 2.26
SGMS1-208ENST00000608287 CCDC125Q86Z20 511 aa29.15■■■□□ 2.26
SGMS1-208ENST00000608287 ADAMTS2O95450 1211 aa29.14■■■□□ 2.26
SGMS1-208ENST00000608287 PTCH1Q13635 1447 aa29.13■■■□□ 2.25
SGMS1-208ENST00000608287 RRBP1Q9P2E9 1410 aaKnown RBP29.13■■■□□ 2.25
SGMS1-208ENST00000608287 USP21Q9UK80 565 aa29.13■■■□□ 2.25
SGMS1-208ENST00000608287 LAMC1P11047 1609 aa29.12■■■□□ 2.25
SGMS1-208ENST00000608287 ROCK1Q13464 1354 aa29.12■■■□□ 2.25
SGMS1-208ENST00000608287 NALCNQ8IZF0 1738 aa29.1■■■□□ 2.25
SGMS1-208ENST00000608287 ZNF326Q5BKZ1 582 aaKnown RBP29.08■■■□□ 2.25
SGMS1-208ENST00000608287 C1orf167Q5SNV9 1468 aa29.08■■■□□ 2.25
SGMS1-208ENST00000608287 NUP155O75694 1391 aa29.07■■■□□ 2.24
SGMS1-208ENST00000608287 METP08581 1390 aa29.07■■■□□ 2.24
SGMS1-208ENST00000608287 FNBP4Q8N3X1 1017 aaPredicted RBP29.06■■■□□ 2.24
SGMS1-208ENST00000608287 DDX17Q92841 729 aaKnown RBP29.06■■■□□ 2.24
SGMS1-208ENST00000608287 SPHKAPQ2M3C7 1700 aa29.05■■■□□ 2.24
SGMS1-208ENST00000608287 SRCAPQ6ZRS2 3230 aa29.05■■■□□ 2.24
SGMS1-208ENST00000608287 SOS2Q07890 1332 aaPredicted RBP29.04■■■□□ 2.24
SGMS1-208ENST00000608287 ATRNO75882 1429 aa29.03■■■□□ 2.24
SGMS1-208ENST00000608287 COL22A1Q8NFW1 1626 aaPredicted RBP29.01■■■□□ 2.23
SGMS1-208ENST00000608287 NEXMIFQ5QGS0 1516 aa28.94■■■□□ 2.22
SGMS1-208ENST00000608287 NPHP3Q7Z494 1330 aa28.92■■■□□ 2.22
SGMS1-208ENST00000608287 MARF1Q9Y4F3 1742 aaKnown RBP28.91■■■□□ 2.22
SGMS1-208ENST00000608287 PRAG1Q86YV5 1406 aa28.91■■■□□ 2.22
SGMS1-208ENST00000608287 MYOM2P54296 1465 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms