RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
RER1-209ENST00000605895 C22orf23Q9BZE7 217 aa19.6■□□□□ 0.73
RER1-209ENST00000605895 ERBINQ96RT1 1412 aa19.6■□□□□ 0.73
RER1-209ENST00000605895 ZNF608Q9ULD9 1512 aaPredicted RBP19.59■□□□□ 0.73
RER1-209ENST00000605895 CGNL1Q0VF96 1302 aa19.59■□□□□ 0.73
RER1-209ENST00000605895 EIF3AQ14152 1382 aaKnown RBP19.59■□□□□ 0.73
RER1-209ENST00000605895 AMER1Q5JTC6 1135 aaPredicted RBP19.58■□□□□ 0.73
RER1-209ENST00000605895 CHMP5Q9NZZ3 219 aa19.58■□□□□ 0.73
RER1-209ENST00000605895 E9PSI1 815 aa19.57■□□□□ 0.72
RER1-209ENST00000605895 WDR62O43379 1518 aa19.57■□□□□ 0.72
RER1-209ENST00000605895 KIAA1211Q6ZU35 1233 aa19.57■□□□□ 0.72
RER1-209ENST00000605895 CCDC144AA2RUR9 1427 aa19.57■□□□□ 0.72
RER1-209ENST00000605895 NKTRP30414 1462 aaKnown RBP19.56■□□□□ 0.72
RER1-209ENST00000605895 PRAG1Q86YV5 1406 aa19.56■□□□□ 0.72
RER1-209ENST00000605895 PLEKHG5O94827 1062 aa19.55■□□□□ 0.72
RER1-209ENST00000605895 NUP153P49790 1475 aaKnown RBP19.55■□□□□ 0.72
RER1-209ENST00000605895 NLRP1Q9C000 1473 aa19.55■□□□□ 0.72
RER1-209ENST00000605895 FAM13BQ9NYF5 915 aa19.54■□□□□ 0.72
RER1-209ENST00000605895 MAGI2Q86UL8 1455 aa19.54■□□□□ 0.72
RER1-209ENST00000605895 HSCBQ8IWL3 235 aa19.54■□□□□ 0.72
RER1-209ENST00000605895 TRMT2AQ8IZ69 625 aaKnown RBP19.54■□□□□ 0.72
RER1-209ENST00000605895 GPATCH8Q9UKJ3 1502 aaKnown RBP19.53■□□□□ 0.72
RER1-209ENST00000605895 E9PCH4 1651 aa19.53■□□□□ 0.72
RER1-209ENST00000605895 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
RER1-209ENST00000605895 PDE3AQ14432 1141 aa19.52■□□□□ 0.72
RER1-209ENST00000605895 PLEKHH2Q8IVE3 1493 aa19.52■□□□□ 0.71
RER1-209ENST00000605895 COL17A1Q9UMD9 1497 aaPredicted RBP19.51■□□□□ 0.71
RER1-209ENST00000605895 A0A0U1RQG5 324 aaPredicted RBP19.51■□□□□ 0.71
RER1-209ENST00000605895 TNPO1Q92973 898 aaKnown RBP19.51■□□□□ 0.71
RER1-209ENST00000605895 C9orf84Q5VXU9 1444 aa19.5■□□□□ 0.71
RER1-209ENST00000605895 IQGAP2Q13576 1575 aa19.5■□□□□ 0.71
RER1-209ENST00000605895 NCLP19338 710 aaKnown RBP19.5■□□□□ 0.71
RER1-209ENST00000605895 PMFBP1Q8TBY8 1022 aa19.5■□□□□ 0.71
RER1-209ENST00000605895 RARSP54136 660 aaKnown RBP19.49■□□□□ 0.71
RER1-209ENST00000605895 HSP90AB1P08238 724 aaKnown RBP19.49■□□□□ 0.71
RER1-209ENST00000605895 PLEKHD1A6NEE1 506 aa19.48■□□□□ 0.71
RER1-209ENST00000605895 RWDD1Q9H446 243 aaPredicted RBP19.48■□□□□ 0.71
RER1-209ENST00000605895 PLB1Q6P1J6 1458 aa19.48■□□□□ 0.71
RER1-209ENST00000605895 FTSJ3Q8IY81 847 aaKnown RBP19.47■□□□□ 0.71
RER1-209ENST00000605895 R3HCC1Q9Y3T6 440 aaKnown RBP19.46■□□□□ 0.71
RER1-209ENST00000605895 PODXL2Q9NZ53 605 aa19.46■□□□□ 0.71
RER1-209ENST00000605895 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
RER1-209ENST00000605895 RBM42Q9BTD8 480 aaKnown RBP19.46■□□□□ 0.71
RER1-209ENST00000605895 TROQ12816 1431 aaPredicted RBP19.46■□□□□ 0.71
RER1-209ENST00000605895 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
RER1-209ENST00000605895 DDX11L8A8MPP1 907 aa19.44■□□□□ 0.7
RER1-209ENST00000605895 KIF21AQ7Z4S6 1674 aa19.44■□□□□ 0.7
RER1-209ENST00000605895 PRDM10Q9NQV6 1147 aa19.44■□□□□ 0.7
RER1-209ENST00000605895 TSR2Q969E8 191 aaKnown RBP19.43■□□□□ 0.7
RER1-209ENST00000605895 A2MP01023 1474 aa19.43■□□□□ 0.7
RER1-209ENST00000605895 CD2BP2O95400 341 aaKnown RBP19.43■□□□□ 0.7
RER1-209ENST00000605895 ITPRIPQ8IWB1 547 aa19.43■□□□□ 0.7
RER1-209ENST00000605895 TCP11L2Q8N4U5 519 aa19.43■□□□□ 0.7
RER1-209ENST00000605895 LNPKQ9C0E8 428 aa19.42■□□□□ 0.7
RER1-209ENST00000605895 KDM5DQ9BY66 1539 aa19.41■□□□□ 0.7
RER1-209ENST00000605895 NASPP49321 788 aaPredicted RBP19.41■□□□□ 0.7
RER1-209ENST00000605895 ZNF692Q9BU19 519 aaPredicted RBP19.41■□□□□ 0.7
RER1-209ENST00000605895 SSFA2P28290 1259 aa19.41■□□□□ 0.7
RER1-209ENST00000605895 XPCQ01831 940 aaPredicted RBP19.41■□□□□ 0.7
RER1-209ENST00000605895 PDCL3Q9H2J4 239 aa19.4■□□□□ 0.7
RER1-209ENST00000605895 MSNP26038 577 aaKnown RBP19.4■□□□□ 0.7
RER1-209ENST00000605895 MPNDQ8N594 471 aa19.4■□□□□ 0.7
RER1-209ENST00000605895 CARD14Q9BXL6 1004 aa19.39■□□□□ 0.69
RER1-209ENST00000605895 WDR7Q9Y4E6 1490 aa19.39■□□□□ 0.69
RER1-209ENST00000605895 DDX49Q9Y6V7 483 aaKnown RBP19.38■□□□□ 0.69
RER1-209ENST00000605895 RIPK4P57078 832 aa19.38■□□□□ 0.69
RER1-209ENST00000605895 TPM2P07951 284 aa19.37■□□□□ 0.69
RER1-209ENST00000605895 CHAMP1Q96JM3 812 aa19.37■□□□□ 0.69
RER1-209ENST00000605895 ADGRL2O95490 1459 aa19.36■□□□□ 0.69
RER1-209ENST00000605895 ANP32BQ92688 251 aaKnown RBP19.36■□□□□ 0.69
RER1-209ENST00000605895 GBP4Q96PP9 640 aa19.36■□□□□ 0.69
RER1-209ENST00000605895 INSRP06213 1382 aa19.36■□□□□ 0.69
RER1-209ENST00000605895 TRPM1Q7Z4N2 1603 aa19.36■□□□□ 0.69
RER1-209ENST00000605895 PLA2R1Q13018 1463 aa19.35■□□□□ 0.69
RER1-209ENST00000605895 FOXD4L5Q5VV16 416 aaPredicted RBP19.35■□□□□ 0.69
RER1-209ENST00000605895 FOXD4L4Q8WXT5 416 aaPredicted RBP19.35■□□□□ 0.69
RER1-209ENST00000605895 SMC4Q9NTJ3 1288 aa19.35■□□□□ 0.69
RER1-209ENST00000605895 CEP170Q5SW79 1584 aa19.35■□□□□ 0.69
RER1-209ENST00000605895 MVPQ14764 893 aaKnown RBP19.35■□□□□ 0.69
RER1-209ENST00000605895 TPRNQ4KMQ1 711 aa19.35■□□□□ 0.69
RER1-209ENST00000605895 ZHX1Q9UKY1 873 aaPredicted RBP19.35■□□□□ 0.69
RER1-209ENST00000605895 DISP1Q96F81 1524 aa19.34■□□□□ 0.69
RER1-209ENST00000605895 DZIP1LQ8IYY4 767 aaKnown RBP19.34■□□□□ 0.69
RER1-209ENST00000605895 JARID2Q92833 1246 aaPredicted RBP19.34■□□□□ 0.69
RER1-209ENST00000605895 GPRASP1Q5JY77 1395 aa19.33■□□□□ 0.69
RER1-209ENST00000605895 CAVIN1Q6NZI2 390 aaKnown RBP19.33■□□□□ 0.68
RER1-209ENST00000605895 MORC1Q86VD1 984 aa19.33■□□□□ 0.68
RER1-209ENST00000605895 ZSCAN30Q86W11 494 aa19.33■□□□□ 0.68
RER1-209ENST00000605895 FAM135AQ9P2D6 1515 aa19.33■□□□□ 0.68
RER1-209ENST00000605895 MCTP1Q6DN14 999 aa19.32■□□□□ 0.68
RER1-209ENST00000605895 ADGBQ8N7X0 1667 aa19.31■□□□□ 0.68
RER1-209ENST00000605895 C1orf115Q9H7X2 142 aa19.31■□□□□ 0.68
RER1-209ENST00000605895 ZKSCAN2Q63HK3 967 aa19.31■□□□□ 0.68
RER1-209ENST00000605895 GAS2L2Q8NHY3 880 aa19.3■□□□□ 0.68
RER1-209ENST00000605895 RTEL1-TNFRSF6BF6WH68 1400 aa19.3■□□□□ 0.68
RER1-209ENST00000605895 RAPGEF6Q8TEU7 1601 aa19.3■□□□□ 0.68
RER1-209ENST00000605895 U2AF1L5P0DN76 240 aaPredicted RBP19.3■□□□□ 0.68
RER1-209ENST00000605895 U2AF1Q01081 240 aaKnown RBP eCLIP19.3■□□□□ 0.68
RER1-209ENST00000605895 CHMP7Q8WUX9 453 aaPredicted RBP19.3■□□□□ 0.68
RER1-209ENST00000605895 CDCA8Q53HL2 280 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms