RNA–Protein interactions for RNA: ENST00000605358.5

CCDC12-212, Transcript of coiled-coil domain containing 12, humanhuman

TSL 5

Gene CCDC12, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-212ENST00000605358 PLEKHG1Q9ULL1 1385 aa27.44■■□□□ 1.98
CCDC12-212ENST00000605358 GCC2Q8IWJ2 1684 aa27.43■■□□□ 1.98
CCDC12-212ENST00000605358 ZFYVE9O95405 1425 aa27.43■■□□□ 1.98
CCDC12-212ENST00000605358 ROCK1Q13464 1354 aa27.43■■□□□ 1.98
CCDC12-212ENST00000605358 SENP3Q9H4L4 574 aaPredicted RBP27.42■■□□□ 1.98
CCDC12-212ENST00000605358 UNC13BO14795 1591 aa27.41■■□□□ 1.98
CCDC12-212ENST00000605358 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.41■■□□□ 1.98
CCDC12-212ENST00000605358 BCANQ96GW7 911 aa27.41■■□□□ 1.98
CCDC12-212ENST00000605358 TMEM131LA2VDJ0 1609 aa27.38■■□□□ 1.97
CCDC12-212ENST00000605358 MSH6P52701 1360 aa27.38■■□□□ 1.97
CCDC12-212ENST00000605358 TBX22Q9Y458 520 aa27.38■■□□□ 1.97
CCDC12-212ENST00000605358 RIMS2Q9UQ26 1411 aa27.38■■□□□ 1.97
CCDC12-212ENST00000605358 PPP1R15AO75807 674 aaPredicted RBP27.37■■□□□ 1.97
CCDC12-212ENST00000605358 NCOA3Q9Y6Q9 1424 aa27.37■■□□□ 1.97
CCDC12-212ENST00000605358 CHD2O14647 1828 aaKnown RBP27.37■■□□□ 1.97
CCDC12-212ENST00000605358 MYO5BQ9ULV0 1848 aa27.36■■□□□ 1.97
CCDC12-212ENST00000605358 ROBO1Q9Y6N7 1651 aa27.35■■□□□ 1.97
CCDC12-212ENST00000605358 SLAIN2Q9P270 581 aa27.32■■□□□ 1.96
CCDC12-212ENST00000605358 IQGAP3Q86VI3 1631 aa27.31■■□□□ 1.96
CCDC12-212ENST00000605358 RGS17Q9UGC6 210 aaPredicted RBP27.31■■□□□ 1.96
CCDC12-212ENST00000605358 PIK3R4Q99570 1358 aa27.31■■□□□ 1.96
CCDC12-212ENST00000605358 E9PCH4 1651 aa27.3■■□□□ 1.96
CCDC12-212ENST00000605358 RBM33Q96EV2 1170 aaKnown RBP27.29■■□□□ 1.96
CCDC12-212ENST00000605358 DIP2AQ14689 1571 aa27.28■■□□□ 1.96
CCDC12-212ENST00000605358 CHGAP10645 457 aaKnown RBP27.26■■□□□ 1.95
CCDC12-212ENST00000605358 NUP155O75694 1391 aa27.24■■□□□ 1.95
CCDC12-212ENST00000605358 ADAMTS13Q76LX8 1427 aa27.24■■□□□ 1.95
CCDC12-212ENST00000605358 C19orf44Q9H6X5 657 aa27.21■■□□□ 1.95
CCDC12-212ENST00000605358 JCADQ9P266 1359 aa27.21■■□□□ 1.95
CCDC12-212ENST00000605358 PHLPP1O60346 1717 aa27.2■■□□□ 1.94
CCDC12-212ENST00000605358 CADPS2Q86UW7 1296 aa27.2■■□□□ 1.94
CCDC12-212ENST00000605358 TRPM2O94759 1503 aa27.17■■□□□ 1.94
CCDC12-212ENST00000605358 C14orf37Q86TY3 774 aa27.16■■□□□ 1.94
CCDC12-212ENST00000605358 ATF3P18847 181 aa27.15■■□□□ 1.94
CCDC12-212ENST00000605358 POTEAQ6S8J7 498 aa27.14■■□□□ 1.94
CCDC12-212ENST00000605358 NUTM2DQ5VT03 806 aaPredicted RBP27.13■■□□□ 1.93
CCDC12-212ENST00000605358 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.13■■□□□ 1.93
CCDC12-212ENST00000605358 AMOTL2Q9Y2J4 779 aa27.12■■□□□ 1.93
CCDC12-212ENST00000605358 SPATA31A6Q5VVP1 1343 aa27.12■■□□□ 1.93
CCDC12-212ENST00000605358 ITGAEP38570 1179 aa27.11■■□□□ 1.93
CCDC12-212ENST00000605358 COL16A1Q07092 1604 aaPredicted RBP27.11■■□□□ 1.93
CCDC12-212ENST00000605358 DCCP43146 1447 aa27.09■■□□□ 1.93
CCDC12-212ENST00000605358 SPHKAPQ2M3C7 1700 aa27.09■■□□□ 1.93
CCDC12-212ENST00000605358 SETBP1Q9Y6X0 1596 aa27.08■■□□□ 1.93
CCDC12-212ENST00000605358 AHDC1Q5TGY3 1603 aaPredicted RBP27.08■■□□□ 1.93
CCDC12-212ENST00000605358 PTPRUQ92729 1446 aa27.06■■□□□ 1.92
CCDC12-212ENST00000605358 ZNF326Q5BKZ1 582 aaKnown RBP27.02■■□□□ 1.92
CCDC12-212ENST00000605358 XRN1Q8IZH2 1706 aaKnown RBP27.02■■□□□ 1.92
CCDC12-212ENST00000605358 NRXN3Q9Y4C0 1643 aa27.01■■□□□ 1.92
CCDC12-212ENST00000605358 SHPRHQ149N8 1683 aa27.01■■□□□ 1.91
CCDC12-212ENST00000605358 ZNF772Q68DY9 489 aaPredicted RBP26.99■■□□□ 1.91
CCDC12-212ENST00000605358 BRINP3Q76B58 766 aa26.99■■□□□ 1.91
CCDC12-212ENST00000605358 RRBP1Q9P2E9 1410 aaKnown RBP26.98■■□□□ 1.91
CCDC12-212ENST00000605358 MEX3CQ5U5Q3 659 aaKnown RBP26.95■■□□□ 1.9
CCDC12-212ENST00000605358 METP08581 1390 aa26.95■■□□□ 1.9
CCDC12-212ENST00000605358 PPARGC1BQ86YN6 1023 aaKnown RBP26.94■■□□□ 1.9
CCDC12-212ENST00000605358 LRP6O75581 1613 aa26.94■■□□□ 1.9
CCDC12-212ENST00000605358 KIF1BO60333 1816 aa26.93■■□□□ 1.9
CCDC12-212ENST00000605358 NAIPQ13075 1403 aa26.93■■□□□ 1.9
CCDC12-212ENST00000605358 NEXMIFQ5QGS0 1516 aa26.93■■□□□ 1.9
CCDC12-212ENST00000605358 SETD5Q9C0A6 1442 aa26.92■■□□□ 1.9
CCDC12-212ENST00000605358 CLTCL1P53675 1640 aa26.92■■□□□ 1.9
CCDC12-212ENST00000605358 MST1RQ04912 1400 aa26.91■■□□□ 1.9
CCDC12-212ENST00000605358 ASXL1Q8IXJ9 1541 aa26.91■■□□□ 1.9
CCDC12-212ENST00000605358 ADGRL3Q9HAR2 1447 aa26.9■■□□□ 1.9
CCDC12-212ENST00000605358 VGFO15240 615 aaPredicted RBP26.9■■□□□ 1.9
CCDC12-212ENST00000605358 LRRC59Q96AG4 307 aaKnown RBP26.9■■□□□ 1.9
CCDC12-212ENST00000605358 RPGRIP1LQ68CZ1 1315 aa26.88■■□□□ 1.89
CCDC12-212ENST00000605358 NHSL1Q5SYE7 1610 aa26.87■■□□□ 1.89
CCDC12-212ENST00000605358 HFM1A2PYH4 1435 aa26.84■■□□□ 1.89
CCDC12-212ENST00000605358 PTCH1Q13635 1447 aa26.83■■□□□ 1.89
CCDC12-212ENST00000605358 PRAG1Q86YV5 1406 aa26.82■■□□□ 1.88
CCDC12-212ENST00000605358 RXRBP28702 533 aa26.82■■□□□ 1.88
CCDC12-212ENST00000605358 CDK12Q9NYV4 1490 aaPredicted RBP26.81■■□□□ 1.88
CCDC12-212ENST00000605358 SETD1AO15047 1707 aaKnown RBP26.8■■□□□ 1.88
CCDC12-212ENST00000605358 TRIM52Q96A61 297 aa26.8■■□□□ 1.88
CCDC12-212ENST00000605358 NALCNQ8IZF0 1738 aa26.79■■□□□ 1.88
CCDC12-212ENST00000605358 NUTM2BA6NNL0 878 aaPredicted RBP26.79■■□□□ 1.88
CCDC12-212ENST00000605358 NUTM2EB1AL46 878 aaPredicted RBP26.79■■□□□ 1.88
CCDC12-212ENST00000605358 NUTM2AQ8IVF1 878 aaPredicted RBP26.79■■□□□ 1.88
CCDC12-212ENST00000605358 SLC4A1APQ9BWU0 796 aaKnown RBP26.78■■□□□ 1.88
CCDC12-212ENST00000605358 C1orf167Q5SNV9 1468 aa26.76■■□□□ 1.87
CCDC12-212ENST00000605358 LAMC1P11047 1609 aa26.76■■□□□ 1.87
CCDC12-212ENST00000605358 PNPLA6Q8IY17 1366 aa26.74■■□□□ 1.87
CCDC12-212ENST00000605358 AFF2P51816 1311 aa26.74■■□□□ 1.87
CCDC12-212ENST00000605358 UPF1Q92900 1129 aaKnown RBP eCLIP26.73■■□□□ 1.87
CCDC12-212ENST00000605358 ROBO2Q9HCK4 1378 aa26.72■■□□□ 1.87
CCDC12-212ENST00000605358 PPLO60437 1756 aa26.71■■□□□ 1.87
CCDC12-212ENST00000605358 SOS2Q07890 1332 aaPredicted RBP26.7■■□□□ 1.87
CCDC12-212ENST00000605358 DDX17Q92841 729 aaKnown RBP26.68■■□□□ 1.86
CCDC12-212ENST00000605358 RBM6P78332 1123 aaKnown RBP26.67■■□□□ 1.86
CCDC12-212ENST00000605358 C8orf37Q96NL8 207 aa26.66■■□□□ 1.86
CCDC12-212ENST00000605358 QTRT2Q9H974 415 aaKnown RBP26.66■■□□□ 1.86
CCDC12-212ENST00000605358 ACIN1Q9UKV3 1341 aaKnown RBP26.65■■□□□ 1.86
CCDC12-212ENST00000605358 ORAI2Q96SN7 254 aa26.64■■□□□ 1.86
CCDC12-212ENST00000605358 NGLY1Q96IV0 654 aa26.62■■□□□ 1.85
CCDC12-212ENST00000605358 CCDC144AA2RUR9 1427 aa26.62■■□□□ 1.85
CCDC12-212ENST00000605358 ANKRD30BQ9BXX2 1392 aa26.61■■□□□ 1.85
CCDC12-212ENST00000605358 CDC42BPGQ6DT37 1551 aa26.6■■□□□ 1.85
CCDC12-212ENST00000605358 NPHP3Q7Z494 1330 aa26.59■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms