RNA–Protein interactions for RNA: ENST00000603907.1

GRAMD1A-214, Transcript of GRAM domain containing 1A, humanhuman

TSL 2

Gene GRAMD1A, Length 450 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-214ENST00000603907 XIRP1Q702N8 1843 aaKnown RBP30.87■■■□□ 2.53
GRAMD1A-214ENST00000603907 SLC4A1APQ9BWU0 796 aaKnown RBP30.86■■■□□ 2.53
GRAMD1A-214ENST00000603907 PIK3C2BO00750 1634 aa30.85■■■□□ 2.53
GRAMD1A-214ENST00000603907 STAG3Q9UJ98 1225 aa30.83■■■□□ 2.53
GRAMD1A-214ENST00000603907 E9PCH4 1651 aa30.82■■■□□ 2.52
GRAMD1A-214ENST00000603907 NOS1P29475 1434 aa30.81■■■□□ 2.52
GRAMD1A-214ENST00000603907 MPHOSPH9Q99550 1183 aa30.81■■■□□ 2.52
GRAMD1A-214ENST00000603907 TMEM2Q9UHN6 1383 aa30.8■■■□□ 2.52
GRAMD1A-214ENST00000603907 KDM5AP29375 1690 aaKnown RBP30.8■■■□□ 2.52
GRAMD1A-214ENST00000603907 PCGF6Q9BYE7 350 aa30.75■■■□□ 2.51
GRAMD1A-214ENST00000603907 FAM135BQ49AJ0 1406 aa30.74■■■□□ 2.51
GRAMD1A-214ENST00000603907 SLC52A1Q9NWF4 448 aa30.72■■■□□ 2.51
GRAMD1A-214ENST00000603907 TMEM94Q12767 1356 aa30.7■■■□□ 2.51
GRAMD1A-214ENST00000603907 KCNA6P17658 529 aa30.69■■■□□ 2.5
GRAMD1A-214ENST00000603907 RGS17Q9UGC6 210 aaPredicted RBP30.69■■■□□ 2.5
GRAMD1A-214ENST00000603907 IDI1Q13907 227 aa30.68■■■□□ 2.5
GRAMD1A-214ENST00000603907 SPHKAPQ2M3C7 1700 aa30.67■■■□□ 2.5
GRAMD1A-214ENST00000603907 PROSER2Q86WR7 435 aaPredicted RBP30.65■■■□□ 2.5
GRAMD1A-214ENST00000603907 ROBO1Q9Y6N7 1651 aa30.65■■■□□ 2.5
GRAMD1A-214ENST00000603907 TRPM2O94759 1503 aa30.64■■■□□ 2.5
GRAMD1A-214ENST00000603907 ADGRB3O60242 1522 aa30.63■■■□□ 2.49
GRAMD1A-214ENST00000603907 SLC26A8Q96RN1 970 aa30.63■■■□□ 2.49
GRAMD1A-214ENST00000603907 NKTRP30414 1462 aaKnown RBP30.62■■■□□ 2.49
GRAMD1A-214ENST00000603907 NWD1Q149M9 1564 aa30.59■■■□□ 2.49
GRAMD1A-214ENST00000603907 FOXD1Q16676 465 aa30.59■■■□□ 2.49
GRAMD1A-214ENST00000603907 BCANQ96GW7 911 aa30.58■■■□□ 2.49
GRAMD1A-214ENST00000603907 MSH6P52701 1360 aa30.55■■■□□ 2.48
GRAMD1A-214ENST00000603907 RBM33Q96EV2 1170 aaKnown RBP30.55■■■□□ 2.48
GRAMD1A-214ENST00000603907 POTEAQ6S8J7 498 aa30.52■■■□□ 2.48
GRAMD1A-214ENST00000603907 CCDC144AA2RUR9 1427 aa30.52■■■□□ 2.48
GRAMD1A-214ENST00000603907 ANKRD30BQ9BXX2 1392 aa30.52■■■□□ 2.48
GRAMD1A-214ENST00000603907 CLTCL1P53675 1640 aa30.51■■■□□ 2.47
GRAMD1A-214ENST00000603907 DHX57Q6P158 1386 aaKnown RBP30.5■■■□□ 2.47
GRAMD1A-214ENST00000603907 PHLPP1O60346 1717 aa30.5■■■□□ 2.47
GRAMD1A-214ENST00000603907 TMEM131LA2VDJ0 1609 aa30.47■■■□□ 2.47
GRAMD1A-214ENST00000603907 HDGFP51858 240 aaKnown RBP30.47■■■□□ 2.47
GRAMD1A-214ENST00000603907 SLAIN2Q9P270 581 aa30.47■■■□□ 2.47
GRAMD1A-214ENST00000603907 CHD2O14647 1828 aaKnown RBP30.47■■■□□ 2.47
GRAMD1A-214ENST00000603907 MYO5BQ9ULV0 1848 aa30.47■■■□□ 2.47
GRAMD1A-214ENST00000603907 PLEKHG1Q9ULL1 1385 aa30.46■■■□□ 2.47
GRAMD1A-214ENST00000603907 PPP1R15AO75807 674 aaPredicted RBP30.45■■■□□ 2.47
GRAMD1A-214ENST00000603907 ZFYVE9O95405 1425 aa30.44■■■□□ 2.46
GRAMD1A-214ENST00000603907 JCADQ9P266 1359 aa30.43■■■□□ 2.46
GRAMD1A-214ENST00000603907 CHGAP10645 457 aaKnown RBP30.43■■■□□ 2.46
GRAMD1A-214ENST00000603907 KIF1BO60333 1816 aa30.43■■■□□ 2.46
GRAMD1A-214ENST00000603907 RIMS2Q9UQ26 1411 aa30.42■■■□□ 2.46
GRAMD1A-214ENST00000603907 NCOA3Q9Y6Q9 1424 aa30.38■■■□□ 2.45
GRAMD1A-214ENST00000603907 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.36■■■□□ 2.45
GRAMD1A-214ENST00000603907 TBX22Q9Y458 520 aa30.36■■■□□ 2.45
GRAMD1A-214ENST00000603907 COL16A1Q07092 1604 aaPredicted RBP30.35■■■□□ 2.45
GRAMD1A-214ENST00000603907 SPATA31E1Q6ZUB1 1445 aa30.34■■■□□ 2.45
GRAMD1A-214ENST00000603907 C14orf37Q86TY3 774 aa30.34■■■□□ 2.45
GRAMD1A-214ENST00000603907 SETD1AO15047 1707 aaKnown RBP30.33■■■□□ 2.45
GRAMD1A-214ENST00000603907 RPGRIP1LQ68CZ1 1315 aa30.33■■■□□ 2.45
GRAMD1A-214ENST00000603907 ZNF326Q5BKZ1 582 aaKnown RBP30.32■■■□□ 2.44
GRAMD1A-214ENST00000603907 DIP2AQ14689 1571 aa30.31■■■□□ 2.44
GRAMD1A-214ENST00000603907 SPATA31A6Q5VVP1 1343 aa30.28■■■□□ 2.44
GRAMD1A-214ENST00000603907 CADPS2Q86UW7 1296 aa30.28■■■□□ 2.44
GRAMD1A-214ENST00000603907 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.27■■■□□ 2.44
GRAMD1A-214ENST00000603907 PIK3R4Q99570 1358 aa30.27■■■□□ 2.44
GRAMD1A-214ENST00000603907 CLSPNQ9HAW4 1339 aa30.26■■■□□ 2.44
GRAMD1A-214ENST00000603907 MEX3CQ5U5Q3 659 aaKnown RBP30.26■■■□□ 2.43
GRAMD1A-214ENST00000603907 ADAMTS13Q76LX8 1427 aa30.25■■■□□ 2.43
GRAMD1A-214ENST00000603907 ATF3P18847 181 aa30.25■■■□□ 2.43
GRAMD1A-214ENST00000603907 NEXMIFQ5QGS0 1516 aa30.24■■■□□ 2.43
GRAMD1A-214ENST00000603907 C19orf44Q9H6X5 657 aa30.24■■■□□ 2.43
GRAMD1A-214ENST00000603907 AHDC1Q5TGY3 1603 aaPredicted RBP30.24■■■□□ 2.43
GRAMD1A-214ENST00000603907 RGL3Q3MIN7 710 aa30.23■■■□□ 2.43
GRAMD1A-214ENST00000603907 SHPRHQ149N8 1683 aa30.23■■■□□ 2.43
GRAMD1A-214ENST00000603907 ZNF772Q68DY9 489 aaPredicted RBP30.22■■■□□ 2.43
GRAMD1A-214ENST00000603907 LRP6O75581 1613 aa30.22■■■□□ 2.43
GRAMD1A-214ENST00000603907 VGFO15240 615 aaPredicted RBP30.21■■■□□ 2.43
GRAMD1A-214ENST00000603907 NUTM2DQ5VT03 806 aaPredicted RBP30.21■■■□□ 2.43
GRAMD1A-214ENST00000603907 STAC3Q96MF2 364 aa30.19■■■□□ 2.42
GRAMD1A-214ENST00000603907 SIN3AQ96ST3 1273 aa30.17■■■□□ 2.42
GRAMD1A-214ENST00000603907 PPLO60437 1756 aa30.17■■■□□ 2.42
GRAMD1A-214ENST00000603907 IFT172Q9UG01 1749 aa30.14■■■□□ 2.42
GRAMD1A-214ENST00000603907 AMOTL2Q9Y2J4 779 aa30.14■■■□□ 2.42
GRAMD1A-214ENST00000603907 CCER1Q8TC90 406 aaPredicted RBP30.13■■■□□ 2.41
GRAMD1A-214ENST00000603907 MYOM2P54296 1465 aa30.12■■■□□ 2.41
GRAMD1A-214ENST00000603907 NEUROD1Q13562 356 aa30.11■■■□□ 2.41
GRAMD1A-214ENST00000603907 DCCP43146 1447 aa30.11■■■□□ 2.41
GRAMD1A-214ENST00000603907 BRINP3Q76B58 766 aa30.1■■■□□ 2.41
GRAMD1A-214ENST00000603907 PTPRUQ92729 1446 aa30.09■■■□□ 2.41
GRAMD1A-214ENST00000603907 SETBP1Q9Y6X0 1596 aa30.09■■■□□ 2.41
GRAMD1A-214ENST00000603907 UPF1Q92900 1129 aaKnown RBP eCLIP30.07■■■□□ 2.4
GRAMD1A-214ENST00000603907 RXRBP28702 533 aa30.06■■■□□ 2.4
GRAMD1A-214ENST00000603907 DCAF11Q8TEB1 546 aa30.06■■■□□ 2.4
GRAMD1A-214ENST00000603907 XRN1Q8IZH2 1706 aaKnown RBP30.05■■■□□ 2.4
GRAMD1A-214ENST00000603907 NUTM2BA6NNL0 878 aaPredicted RBP30.05■■■□□ 2.4
GRAMD1A-214ENST00000603907 NUTM2EB1AL46 878 aaPredicted RBP30.05■■■□□ 2.4
GRAMD1A-214ENST00000603907 NUTM2AQ8IVF1 878 aaPredicted RBP30.05■■■□□ 2.4
GRAMD1A-214ENST00000603907 NRXN1Q9ULB1 1477 aa30.05■■■□□ 2.4
GRAMD1A-214ENST00000603907 ADGRF5Q8IZF2 1346 aa30.04■■■□□ 2.4
GRAMD1A-214ENST00000603907 ASXL1Q8IXJ9 1541 aa30.04■■■□□ 2.4
GRAMD1A-214ENST00000603907 NRXN3Q9Y4C0 1643 aa30.03■■■□□ 2.4
GRAMD1A-214ENST00000603907 PIK3C2GO75747 1445 aa30.02■■■□□ 2.4
GRAMD1A-214ENST00000603907 TONSLQ96HA7 1378 aa30.02■■■□□ 2.4
GRAMD1A-214ENST00000603907 NHSL1Q5SYE7 1610 aa30.01■■■□□ 2.39
GRAMD1A-214ENST00000603907 L3MBTL2Q969R5 705 aa30.01■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms