RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-222ENST00000600517 SLC26A8Q96RN1 970 aa20.08■□□□□ 0.81
ARHGEF1-222ENST00000600517 PPP1R15AO75807 674 aaPredicted RBP20.07■□□□□ 0.8
ARHGEF1-222ENST00000600517 SPHKAPQ2M3C7 1700 aa20.07■□□□□ 0.8
ARHGEF1-222ENST00000600517 PLEKHG1Q9ULL1 1385 aa20.07■□□□□ 0.8
ARHGEF1-222ENST00000600517 TRPM2O94759 1503 aa20.07■□□□□ 0.8
ARHGEF1-222ENST00000600517 BCANQ96GW7 911 aa20.06■□□□□ 0.8
ARHGEF1-222ENST00000600517 NUTM2DQ5VT03 806 aaPredicted RBP20.04■□□□□ 0.8
ARHGEF1-222ENST00000600517 KCNA6P17658 529 aa20.03■□□□□ 0.8
ARHGEF1-222ENST00000600517 FOXD1Q16676 465 aa20.03■□□□□ 0.8
ARHGEF1-222ENST00000600517 MYO5BQ9ULV0 1848 aa20.03■□□□□ 0.8
ARHGEF1-222ENST00000600517 RAB3GAP2Q9H2M9 1393 aa20.03■□□□□ 0.8
ARHGEF1-222ENST00000600517 UBAP1LF5GYI3 381 aa20.02■□□□□ 0.8
ARHGEF1-222ENST00000600517 HRCP23327 699 aa20.02■□□□□ 0.8
ARHGEF1-222ENST00000600517 ZNF326Q5BKZ1 582 aaKnown RBP20.02■□□□□ 0.8
ARHGEF1-222ENST00000600517 TBX22Q9Y458 520 aa20.02■□□□□ 0.8
ARHGEF1-222ENST00000600517 CLTCL1P53675 1640 aa20.01■□□□□ 0.79
ARHGEF1-222ENST00000600517 LRRC7Q96NW7 1537 aa20.01■□□□□ 0.79
ARHGEF1-222ENST00000600517 SENP3Q9H4L4 574 aaPredicted RBP20■□□□□ 0.79
ARHGEF1-222ENST00000600517 STRCP1A6NGW2 1772 aa19.99■□□□□ 0.79
ARHGEF1-222ENST00000600517 ADAMTS13Q76LX8 1427 aa19.97■□□□□ 0.79
ARHGEF1-222ENST00000600517 TOM1O60784 492 aa19.97■□□□□ 0.79
ARHGEF1-222ENST00000600517 RPGRIP1LQ68CZ1 1315 aa19.95■□□□□ 0.78
ARHGEF1-222ENST00000600517 PROSER2Q86WR7 435 aaPredicted RBP19.94■□□□□ 0.78
ARHGEF1-222ENST00000600517 CCDC144AA2RUR9 1427 aa19.93■□□□□ 0.78
ARHGEF1-222ENST00000600517 PIK3R4Q99570 1358 aa19.93■□□□□ 0.78
ARHGEF1-222ENST00000600517 VGFO15240 615 aaPredicted RBP19.92■□□□□ 0.78
ARHGEF1-222ENST00000600517 NEXMIFQ5QGS0 1516 aa19.92■□□□□ 0.78
ARHGEF1-222ENST00000600517 TMEM94Q12767 1356 aa19.91■□□□□ 0.78
ARHGEF1-222ENST00000600517 KIF1BO60333 1816 aa19.9■□□□□ 0.78
ARHGEF1-222ENST00000600517 DIP2AQ14689 1571 aa19.9■□□□□ 0.78
ARHGEF1-222ENST00000600517 NKTRP30414 1462 aaKnown RBP19.89■□□□□ 0.77
ARHGEF1-222ENST00000600517 NWD1Q149M9 1564 aa19.89■□□□□ 0.77
ARHGEF1-222ENST00000600517 SETBP1Q9Y6X0 1596 aa19.87■□□□□ 0.77
ARHGEF1-222ENST00000600517 SPATA31E1Q6ZUB1 1445 aa19.87■□□□□ 0.77
ARHGEF1-222ENST00000600517 PIP4K2BP78356 416 aa19.87■□□□□ 0.77
ARHGEF1-222ENST00000600517 RBM33Q96EV2 1170 aaKnown RBP19.87■□□□□ 0.77
ARHGEF1-222ENST00000600517 AMOTL2Q9Y2J4 779 aa19.87■□□□□ 0.77
ARHGEF1-222ENST00000600517 RGL3Q3MIN7 710 aa19.86■□□□□ 0.77
ARHGEF1-222ENST00000600517 CHD2O14647 1828 aaKnown RBP19.86■□□□□ 0.77
ARHGEF1-222ENST00000600517 ALKQ9UM73 1620 aa19.85■□□□□ 0.77
ARHGEF1-222ENST00000600517 PTPRUQ92729 1446 aa19.85■□□□□ 0.77
ARHGEF1-222ENST00000600517 NRXN3Q9Y4C0 1643 aa19.84■□□□□ 0.77
ARHGEF1-222ENST00000600517 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
ARHGEF1-222ENST00000600517 METP08581 1390 aa19.83■□□□□ 0.77
ARHGEF1-222ENST00000600517 ANKRD30BQ9BXX2 1392 aa19.83■□□□□ 0.77
ARHGEF1-222ENST00000600517 XIRP1Q702N8 1843 aaKnown RBP19.82■□□□□ 0.76
ARHGEF1-222ENST00000600517 NCOA3Q9Y6Q9 1424 aa19.82■□□□□ 0.76
ARHGEF1-222ENST00000600517 ADGRF5Q8IZF2 1346 aa19.79■□□□□ 0.76
ARHGEF1-222ENST00000600517 HSPA1LP34931 641 aa19.79■□□□□ 0.76
ARHGEF1-222ENST00000600517 MSH6P52701 1360 aa19.79■□□□□ 0.76
ARHGEF1-222ENST00000600517 C19orf44Q9H6X5 657 aa19.77■□□□□ 0.76
ARHGEF1-222ENST00000600517 PPLO60437 1756 aa19.77■□□□□ 0.76
ARHGEF1-222ENST00000600517 C14orf37Q86TY3 774 aa19.75■□□□□ 0.75
ARHGEF1-222ENST00000600517 SLAIN2Q9P270 581 aa19.75■□□□□ 0.75
ARHGEF1-222ENST00000600517 FAM135BQ49AJ0 1406 aa19.75■□□□□ 0.75
ARHGEF1-222ENST00000600517 XRN1Q8IZH2 1706 aaKnown RBP19.73■□□□□ 0.75
ARHGEF1-222ENST00000600517 CADPS2Q86UW7 1296 aa19.71■□□□□ 0.75
ARHGEF1-222ENST00000600517 ATF3P18847 181 aa19.7■□□□□ 0.74
ARHGEF1-222ENST00000600517 PIK3C2GO75747 1445 aa19.69■□□□□ 0.74
ARHGEF1-222ENST00000600517 SETD1AO15047 1707 aaKnown RBP19.69■□□□□ 0.74
ARHGEF1-222ENST00000600517 IFT172Q9UG01 1749 aa19.69■□□□□ 0.74
ARHGEF1-222ENST00000600517 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
ARHGEF1-222ENST00000600517 C14orf93Q9H972 538 aaKnown RBP19.69■□□□□ 0.74
ARHGEF1-222ENST00000600517 PRAG1Q86YV5 1406 aa19.68■□□□□ 0.74
ARHGEF1-222ENST00000600517 NRXN1Q9ULB1 1477 aa19.68■□□□□ 0.74
ARHGEF1-222ENST00000600517 STAC3Q96MF2 364 aa19.68■□□□□ 0.74
ARHGEF1-222ENST00000600517 ROBO2Q9HCK4 1378 aa19.68■□□□□ 0.74
ARHGEF1-222ENST00000600517 MYOM2P54296 1465 aa19.67■□□□□ 0.74
ARHGEF1-222ENST00000600517 PTCH1Q13635 1447 aa19.67■□□□□ 0.74
ARHGEF1-222ENST00000600517 TMEM132EQ6IEE7 984 aa19.66■□□□□ 0.74
ARHGEF1-222ENST00000600517 DCAF11Q8TEB1 546 aa19.66■□□□□ 0.74
ARHGEF1-222ENST00000600517 CFAP70Q5T0N1 1121 aa19.65■□□□□ 0.74
ARHGEF1-222ENST00000600517 DCCP43146 1447 aa19.65■□□□□ 0.74
ARHGEF1-222ENST00000600517 LRPPRCP42704 1394 aaKnown RBP19.64■□□□□ 0.73
ARHGEF1-222ENST00000600517 DHX57Q6P158 1386 aaKnown RBP19.64■□□□□ 0.73
ARHGEF1-222ENST00000600517 ABCC11Q96J66 1382 aa19.64■□□□□ 0.73
ARHGEF1-222ENST00000600517 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.64■□□□□ 0.73
ARHGEF1-222ENST00000600517 ADGRL3Q9HAR2 1447 aa19.63■□□□□ 0.73
ARHGEF1-222ENST00000600517 STK26Q9P289 416 aa19.63■□□□□ 0.73
ARHGEF1-222ENST00000600517 KDM2AQ9Y2K7 1162 aa19.63■□□□□ 0.73
ARHGEF1-222ENST00000600517 TECPR2O15040 1411 aa19.61■□□□□ 0.73
ARHGEF1-222ENST00000600517 SIRT1Q96EB6 747 aa19.61■□□□□ 0.73
ARHGEF1-222ENST00000600517 ROBO1Q9Y6N7 1651 aa19.6■□□□□ 0.73
ARHGEF1-222ENST00000600517 ASXL1Q8IXJ9 1541 aa19.6■□□□□ 0.73
ARHGEF1-222ENST00000600517 YTHDC2Q9H6S0 1430 aaKnown RBP19.59■□□□□ 0.73
ARHGEF1-222ENST00000600517 BRINP3Q76B58 766 aa19.58■□□□□ 0.72
ARHGEF1-222ENST00000600517 WAPLQ7Z5K2 1190 aa19.58■□□□□ 0.72
ARHGEF1-222ENST00000600517 MST1RQ04912 1400 aa19.58■□□□□ 0.72
ARHGEF1-222ENST00000600517 DISP3Q9P2K9 1392 aa19.57■□□□□ 0.72
ARHGEF1-222ENST00000600517 LAMC1P11047 1609 aa19.54■□□□□ 0.72
ARHGEF1-222ENST00000600517 NALCNQ8IZF0 1738 aa19.54■□□□□ 0.72
ARHGEF1-222ENST00000600517 SIN3AQ96ST3 1273 aa19.53■□□□□ 0.72
ARHGEF1-222ENST00000600517 PLEKHH1Q9ULM0 1364 aa19.53■□□□□ 0.72
ARHGEF1-222ENST00000600517 C1orf167Q5SNV9 1468 aa19.51■□□□□ 0.71
ARHGEF1-222ENST00000600517 ADGRB1O14514 1584 aa19.51■□□□□ 0.71
ARHGEF1-222ENST00000600517 KNDC1Q76NI1 1749 aa19.5■□□□□ 0.71
ARHGEF1-222ENST00000600517 L3MBTL2Q969R5 705 aa19.49■□□□□ 0.71
ARHGEF1-222ENST00000600517 PRAM1Q96QH2 718 aa19.49■□□□□ 0.71
ARHGEF1-222ENST00000600517 ORAI2Q96SN7 254 aa19.49■□□□□ 0.71
ARHGEF1-222ENST00000600517 AHDC1Q5TGY3 1603 aaPredicted RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 110.6 ms