RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 MAGI2Q86UL8 1455 aa24.22■■□□□ 1.47
ARHGEF1-221ENST00000600387 SYNMO15061 1565 aa24.21■■□□□ 1.47
ARHGEF1-221ENST00000600387 PLXNC1O60486 1568 aa24.2■■□□□ 1.46
ARHGEF1-221ENST00000600387 SLFN5Q08AF3 891 aa24.2■■□□□ 1.46
ARHGEF1-221ENST00000600387 IQGAP1P46940 1657 aa24.2■■□□□ 1.46
ARHGEF1-221ENST00000600387 PIK3C2GO75747 1445 aa24.19■■□□□ 1.46
ARHGEF1-221ENST00000600387 TRMT2AQ8IZ69 625 aaKnown RBP24.18■■□□□ 1.46
ARHGEF1-221ENST00000600387 SYCP2Q9BX26 1530 aa24.17■■□□□ 1.46
ARHGEF1-221ENST00000600387 RGS3P49796 1198 aa24.17■■□□□ 1.46
ARHGEF1-221ENST00000600387 FRAT2O75474 233 aaPredicted RBP24.16■■□□□ 1.46
ARHGEF1-221ENST00000600387 AMER1Q5JTC6 1135 aaPredicted RBP24.16■■□□□ 1.46
ARHGEF1-221ENST00000600387 ASXL1Q8IXJ9 1541 aa24.16■■□□□ 1.46
ARHGEF1-221ENST00000600387 CDCA8Q53HL2 280 aa24.15■■□□□ 1.46
ARHGEF1-221ENST00000600387 NKTRP30414 1462 aaKnown RBP24.15■■□□□ 1.46
ARHGEF1-221ENST00000600387 ABCC2Q92887 1545 aa24.15■■□□□ 1.46
ARHGEF1-221ENST00000600387 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.15■■□□□ 1.46
ARHGEF1-221ENST00000600387 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.14■■□□□ 1.45
ARHGEF1-221ENST00000600387 FBLN2P98095 1184 aa24.13■■□□□ 1.45
ARHGEF1-221ENST00000600387 NPC1L1Q9UHC9 1359 aa24.13■■□□□ 1.45
ARHGEF1-221ENST00000600387 MADDQ8WXG6 1647 aa24.13■■□□□ 1.45
ARHGEF1-221ENST00000600387 DUOX2Q9NRD8 1548 aa24.11■■□□□ 1.45
ARHGEF1-221ENST00000600387 MYOM1P52179 1685 aa24.09■■□□□ 1.45
ARHGEF1-221ENST00000600387 ARHGAP5Q13017 1502 aa24.08■■□□□ 1.45
ARHGEF1-221ENST00000600387 NGEFQ8N5V2 710 aa24.08■■□□□ 1.44
ARHGEF1-221ENST00000600387 NINLQ9Y2I6 1382 aa24.07■■□□□ 1.44
ARHGEF1-221ENST00000600387 E9PSI1 815 aa24.07■■□□□ 1.44
ARHGEF1-221ENST00000600387 FAM43AQ8N2R8 423 aa24.07■■□□□ 1.44
ARHGEF1-221ENST00000600387 SPHKAPQ2M3C7 1700 aa24.07■■□□□ 1.44
ARHGEF1-221ENST00000600387 CGNL1Q0VF96 1302 aa24.06■■□□□ 1.44
ARHGEF1-221ENST00000600387 MAPK8IP3Q9UPT6 1336 aa24.06■■□□□ 1.44
ARHGEF1-221ENST00000600387 SCAF11Q99590 1463 aaKnown RBP24.05■■□□□ 1.44
ARHGEF1-221ENST00000600387 ERCC6Q03468 1493 aa24.04■■□□□ 1.44
ARHGEF1-221ENST00000600387 PDE3AQ14432 1141 aa24.04■■□□□ 1.44
ARHGEF1-221ENST00000600387 BECN1Q14457 450 aa24.04■■□□□ 1.44
ARHGEF1-221ENST00000600387 TTC37Q6PGP7 1564 aa24.04■■□□□ 1.44
ARHGEF1-221ENST00000600387 USP19O94966 1318 aa24.04■■□□□ 1.44
ARHGEF1-221ENST00000600387 SCAPERQ9BY12 1400 aa24.03■■□□□ 1.44
ARHGEF1-221ENST00000600387 STAC3Q96MF2 364 aa24.03■■□□□ 1.44
ARHGEF1-221ENST00000600387 KDM5AP29375 1690 aaKnown RBP24.03■■□□□ 1.44
ARHGEF1-221ENST00000600387 BCAR3O75815 825 aa24.03■■□□□ 1.44
ARHGEF1-221ENST00000600387 CEP152O94986 1710 aa24.02■■□□□ 1.44
ARHGEF1-221ENST00000600387 APAF1O14727 1248 aa24.01■■□□□ 1.43
ARHGEF1-221ENST00000600387 CCDC146Q8IYE0 955 aa24.01■■□□□ 1.43
ARHGEF1-221ENST00000600387 SPINK5Q9NQ38 1064 aaPredicted RBP24.01■■□□□ 1.43
ARHGEF1-221ENST00000600387 IGHDP01880 384 aa24.01■■□□□ 1.43
ARHGEF1-221ENST00000600387 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24■■□□□ 1.43
ARHGEF1-221ENST00000600387 RSPH6AQ9H0K4 717 aa23.99■■□□□ 1.43
ARHGEF1-221ENST00000600387 KIAA1210Q9ULL0 1709 aa23.97■■□□□ 1.43
ARHGEF1-221ENST00000600387 CLUAP1Q96AJ1 413 aa23.97■■□□□ 1.43
ARHGEF1-221ENST00000600387 TRPM2O94759 1503 aa23.95■■□□□ 1.43
ARHGEF1-221ENST00000600387 ZMYM3Q14202 1370 aa23.95■■□□□ 1.42
ARHGEF1-221ENST00000600387 AAMPQ13685 434 aa23.95■■□□□ 1.42
ARHGEF1-221ENST00000600387 CENPJQ9HC77 1338 aaPredicted RBP23.94■■□□□ 1.42
ARHGEF1-221ENST00000600387 NLRP1Q9C000 1473 aa23.94■■□□□ 1.42
ARHGEF1-221ENST00000600387 SLC24A1O60721 1099 aa23.93■■□□□ 1.42
ARHGEF1-221ENST00000600387 L1TD1Q5T7N2 865 aaKnown RBP23.93■■□□□ 1.42
ARHGEF1-221ENST00000600387 UBE2Q2Q8WVN8 375 aa23.92■■□□□ 1.42
ARHGEF1-221ENST00000600387 SEC24BO95487 1268 aa23.91■■□□□ 1.42
ARHGEF1-221ENST00000600387 CANXP27824 592 aaKnown RBP23.91■■□□□ 1.42
ARHGEF1-221ENST00000600387 POGKQ9P215 609 aa23.91■■□□□ 1.42
ARHGEF1-221ENST00000600387 EIF5BO60841 1220 aaKnown RBP23.9■■□□□ 1.42
ARHGEF1-221ENST00000600387 PMFBP1Q8TBY8 1022 aa23.9■■□□□ 1.42
ARHGEF1-221ENST00000600387 UPF2Q9HAU5 1272 aaKnown RBP23.89■■□□□ 1.42
ARHGEF1-221ENST00000600387 COG6Q9Y2V7 657 aa23.88■■□□□ 1.41
ARHGEF1-221ENST00000600387 CLTCL1P53675 1640 aa23.87■■□□□ 1.41
ARHGEF1-221ENST00000600387 ANTXR1Q9H6X2 564 aa23.87■■□□□ 1.41
ARHGEF1-221ENST00000600387 DMRT2Q9Y5R5 561 aa23.87■■□□□ 1.41
ARHGEF1-221ENST00000600387 PTPRTO14522 1441 aa23.86■■□□□ 1.41
ARHGEF1-221ENST00000600387 PANK1Q8TE04 598 aa23.86■■□□□ 1.41
ARHGEF1-221ENST00000600387 POLR3AO14802 1390 aaPredicted RBP23.86■■□□□ 1.41
ARHGEF1-221ENST00000600387 WWC1Q8IX03 1113 aa23.86■■□□□ 1.41
ARHGEF1-221ENST00000600387 SLKQ9H2G2 1235 aaPredicted RBP23.86■■□□□ 1.41
ARHGEF1-221ENST00000600387 SHROOM2Q13796 1616 aa23.85■■□□□ 1.41
ARHGEF1-221ENST00000600387 TBC1D32Q96NH3 1257 aa23.84■■□□□ 1.41
ARHGEF1-221ENST00000600387 NEURL4Q96JN8 1562 aa23.83■■□□□ 1.41
ARHGEF1-221ENST00000600387 ERVK-7P63135 1459 aa23.82■■□□□ 1.4
ARHGEF1-221ENST00000600387 TET3O43151 1660 aa23.81■■□□□ 1.4
ARHGEF1-221ENST00000600387 SHPRHQ149N8 1683 aa23.8■■□□□ 1.4
ARHGEF1-221ENST00000600387 ABCC1P33527 1531 aa23.8■■□□□ 1.4
ARHGEF1-221ENST00000600387 DEPDC5O75140 1603 aa23.79■■□□□ 1.4
ARHGEF1-221ENST00000600387 PLCH2O75038 1416 aa23.79■■□□□ 1.4
ARHGEF1-221ENST00000600387 RARSP54136 660 aaKnown RBP23.79■■□□□ 1.4
ARHGEF1-221ENST00000600387 CARD14Q9BXL6 1004 aa23.77■■□□□ 1.4
ARHGEF1-221ENST00000600387 TBC1D2Q9BYX2 928 aa23.77■■□□□ 1.4
ARHGEF1-221ENST00000600387 MAP3K4Q9Y6R4 1608 aa23.77■■□□□ 1.4
ARHGEF1-221ENST00000600387 MYO3AQ8NEV4 1616 aa23.76■■□□□ 1.39
ARHGEF1-221ENST00000600387 RWDD1Q9H446 243 aaPredicted RBP23.76■■□□□ 1.39
ARHGEF1-221ENST00000600387 EFCAB2Q5VUJ9 269 aa23.75■■□□□ 1.39
ARHGEF1-221ENST00000600387 PDZRN3Q9UPQ7 1066 aa23.75■■□□□ 1.39
ARHGEF1-221ENST00000600387 PCDHB15Q9Y5E8 787 aa23.75■■□□□ 1.39
ARHGEF1-221ENST00000600387 MYOM2P54296 1465 aa23.75■■□□□ 1.39
ARHGEF1-221ENST00000600387 RUNDC1Q96C34 613 aa23.75■■□□□ 1.39
ARHGEF1-221ENST00000600387 ABCA6Q8N139 1617 aa23.75■■□□□ 1.39
ARHGEF1-221ENST00000600387 IQSEC2Q5JU85 1478 aa23.74■■□□□ 1.39
ARHGEF1-221ENST00000600387 WDR63Q8IWG1 891 aa23.74■■□□□ 1.39
ARHGEF1-221ENST00000600387 RTEL1-TNFRSF6BF6WH68 1400 aa23.73■■□□□ 1.39
ARHGEF1-221ENST00000600387 RRAGDQ9NQL2 400 aaPredicted RBP23.73■■□□□ 1.39
ARHGEF1-221ENST00000600387 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
ARHGEF1-221ENST00000600387 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
ARHGEF1-221ENST00000600387 SBNO2Q9Y2G9 1366 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms