RNA–Protein interactions for RNA: ENST00000598587.1

ARHGEF1-216, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARHGEF1, Length 359 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-216ENST00000598587 PPP1R15AO75807 674 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-216ENST00000598587 TRIM26Q12899 539 aaPredicted RBP17.79■□□□□ 0.44
ARHGEF1-216ENST00000598587 PPLO60437 1756 aa17.79■□□□□ 0.44
ARHGEF1-216ENST00000598587 DIP2AQ14689 1571 aa17.78■□□□□ 0.44
ARHGEF1-216ENST00000598587 LTBP4Q8N2S1 1624 aa17.77■□□□□ 0.44
ARHGEF1-216ENST00000598587 LTKP29376 864 aa17.77■□□□□ 0.44
ARHGEF1-216ENST00000598587 CPS1P31327 1500 aa17.77■□□□□ 0.43
ARHGEF1-216ENST00000598587 FOXD1Q16676 465 aa17.76■□□□□ 0.43
ARHGEF1-216ENST00000598587 ZNF326Q5BKZ1 582 aaKnown RBP17.76■□□□□ 0.43
ARHGEF1-216ENST00000598587 NEXMIFQ5QGS0 1516 aa17.76■□□□□ 0.43
ARHGEF1-216ENST00000598587 PLEKHG1Q9ULL1 1385 aa17.76■□□□□ 0.43
ARHGEF1-216ENST00000598587 IFT172Q9UG01 1749 aa17.75■□□□□ 0.43
ARHGEF1-216ENST00000598587 IQSEC2Q5JU85 1478 aa17.74■□□□□ 0.43
ARHGEF1-216ENST00000598587 BCANQ96GW7 911 aa17.73■□□□□ 0.43
ARHGEF1-216ENST00000598587 ZNF335Q9H4Z2 1342 aaPredicted RBP17.72■□□□□ 0.43
ARHGEF1-216ENST00000598587 STRCP1A6NGW2 1772 aa17.72■□□□□ 0.43
ARHGEF1-216ENST00000598587 SETBP1Q9Y6X0 1596 aa17.71■□□□□ 0.43
ARHGEF1-216ENST00000598587 CHD2O14647 1828 aaKnown RBP17.71■□□□□ 0.43
ARHGEF1-216ENST00000598587 CERKQ8TCT0 537 aa17.7■□□□□ 0.42
ARHGEF1-216ENST00000598587 RPGRIP1LQ68CZ1 1315 aa17.7■□□□□ 0.42
ARHGEF1-216ENST00000598587 NWD1Q149M9 1564 aa17.69■□□□□ 0.42
ARHGEF1-216ENST00000598587 NRXN3Q9Y4C0 1643 aa17.69■□□□□ 0.42
ARHGEF1-216ENST00000598587 SPATA31E1Q6ZUB1 1445 aa17.67■□□□□ 0.42
ARHGEF1-216ENST00000598587 ANKRD30BQ9BXX2 1392 aa17.66■□□□□ 0.42
ARHGEF1-216ENST00000598587 NKTRP30414 1462 aaKnown RBP17.65■□□□□ 0.42
ARHGEF1-216ENST00000598587 VGFO15240 615 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF1-216ENST00000598587 NUTM2DQ5VT03 806 aaPredicted RBP17.65■□□□□ 0.42
ARHGEF1-216ENST00000598587 SLC26A8Q96RN1 970 aa17.65■□□□□ 0.42
ARHGEF1-216ENST00000598587 XIRP1Q702N8 1843 aaKnown RBP17.63■□□□□ 0.41
ARHGEF1-216ENST00000598587 LAMC1P11047 1609 aa17.63■□□□□ 0.41
ARHGEF1-216ENST00000598587 SETD1AO15047 1707 aaKnown RBP17.63■□□□□ 0.41
ARHGEF1-216ENST00000598587 PIK3R4Q99570 1358 aa17.63■□□□□ 0.41
ARHGEF1-216ENST00000598587 ADAMTS13Q76LX8 1427 aa17.63■□□□□ 0.41
ARHGEF1-216ENST00000598587 TBX22Q9Y458 520 aa17.62■□□□□ 0.41
ARHGEF1-216ENST00000598587 LRRC7Q96NW7 1537 aa17.61■□□□□ 0.41
ARHGEF1-216ENST00000598587 RGL3Q3MIN7 710 aa17.6■□□□□ 0.41
ARHGEF1-216ENST00000598587 FBXO41Q8TF61 875 aa17.6■□□□□ 0.41
ARHGEF1-216ENST00000598587 SENP3Q9H4L4 574 aaPredicted RBP17.6■□□□□ 0.41
ARHGEF1-216ENST00000598587 MYOM2P54296 1465 aa17.6■□□□□ 0.41
ARHGEF1-216ENST00000598587 XRN1Q8IZH2 1706 aaKnown RBP17.6■□□□□ 0.41
ARHGEF1-216ENST00000598587 ALKQ9UM73 1620 aa17.59■□□□□ 0.41
ARHGEF1-216ENST00000598587 KCNA6P17658 529 aa17.59■□□□□ 0.41
ARHGEF1-216ENST00000598587 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
ARHGEF1-216ENST00000598587 DHX57Q6P158 1386 aaKnown RBP17.53■□□□□ 0.4
ARHGEF1-216ENST00000598587 KNDC1Q76NI1 1749 aa17.53■□□□□ 0.4
ARHGEF1-216ENST00000598587 NRXN1Q9ULB1 1477 aa17.53■□□□□ 0.4
ARHGEF1-216ENST00000598587 STAC3Q96MF2 364 aa17.53■□□□□ 0.4
ARHGEF1-216ENST00000598587 PROSER2Q86WR7 435 aaPredicted RBP17.52■□□□□ 0.4
ARHGEF1-216ENST00000598587 NCOA3Q9Y6Q9 1424 aa17.51■□□□□ 0.39
ARHGEF1-216ENST00000598587 TMEM94Q12767 1356 aa17.51■□□□□ 0.39
ARHGEF1-216ENST00000598587 ADGRF5Q8IZF2 1346 aa17.5■□□□□ 0.39
ARHGEF1-216ENST00000598587 METP08581 1390 aa17.5■□□□□ 0.39
ARHGEF1-216ENST00000598587 PTPRUQ92729 1446 aa17.49■□□□□ 0.39
ARHGEF1-216ENST00000598587 UBAP1LF5GYI3 381 aa17.49■□□□□ 0.39
ARHGEF1-216ENST00000598587 TOM1O60784 492 aa17.49■□□□□ 0.39
ARHGEF1-216ENST00000598587 AMOTL2Q9Y2J4 779 aa17.49■□□□□ 0.39
ARHGEF1-216ENST00000598587 KIAA1210Q9ULL0 1709 aa17.49■□□□□ 0.39
ARHGEF1-216ENST00000598587 PTCH1Q13635 1447 aa17.48■□□□□ 0.39
ARHGEF1-216ENST00000598587 ILDR1Q86SU0 546 aaPredicted RBP17.48■□□□□ 0.39
ARHGEF1-216ENST00000598587 MSH6P52701 1360 aa17.48■□□□□ 0.39
ARHGEF1-216ENST00000598587 PRAG1Q86YV5 1406 aa17.47■□□□□ 0.39
ARHGEF1-216ENST00000598587 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF1-216ENST00000598587 DCAF11Q8TEB1 546 aa17.47■□□□□ 0.39
ARHGEF1-216ENST00000598587 PCGF6Q9BYE7 350 aa17.47■□□□□ 0.39
ARHGEF1-216ENST00000598587 NALCNQ8IZF0 1738 aa17.47■□□□□ 0.39
ARHGEF1-216ENST00000598587 C14orf37Q86TY3 774 aa17.45■□□□□ 0.38
ARHGEF1-216ENST00000598587 ASXL1Q8IXJ9 1541 aa17.45■□□□□ 0.38
ARHGEF1-216ENST00000598587 KDM2AQ9Y2K7 1162 aa17.43■□□□□ 0.38
ARHGEF1-216ENST00000598587 DCCP43146 1447 aa17.43■□□□□ 0.38
ARHGEF1-216ENST00000598587 TECPR2O15040 1411 aa17.42■□□□□ 0.38
ARHGEF1-216ENST00000598587 SCAF1Q9H7N4 1312 aaKnown RBP17.42■□□□□ 0.38
ARHGEF1-216ENST00000598587 C14orf93Q9H972 538 aaKnown RBP17.41■□□□□ 0.38
ARHGEF1-216ENST00000598587 LRPPRCP42704 1394 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-216ENST00000598587 YTHDC2Q9H6S0 1430 aaKnown RBP17.4■□□□□ 0.38
ARHGEF1-216ENST00000598587 ADGRL3Q9HAR2 1447 aa17.4■□□□□ 0.38
ARHGEF1-216ENST00000598587 ROBO1Q9Y6N7 1651 aa17.39■□□□□ 0.37
ARHGEF1-216ENST00000598587 PIP4K2BP78356 416 aa17.39■□□□□ 0.37
ARHGEF1-216ENST00000598587 NEUROD1Q13562 356 aa17.39■□□□□ 0.37
ARHGEF1-216ENST00000598587 RBM33Q96EV2 1170 aaKnown RBP17.39■□□□□ 0.37
ARHGEF1-216ENST00000598587 ADGRB1O14514 1584 aa17.38■□□□□ 0.37
ARHGEF1-216ENST00000598587 C19orf44Q9H6X5 657 aa17.38■□□□□ 0.37
ARHGEF1-216ENST00000598587 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
ARHGEF1-216ENST00000598587 DLC1Q96QB1 1528 aa17.37■□□□□ 0.37
ARHGEF1-216ENST00000598587 ATF3P18847 181 aa17.37■□□□□ 0.37
ARHGEF1-216ENST00000598587 CFAP70Q5T0N1 1121 aa17.37■□□□□ 0.37
ARHGEF1-216ENST00000598587 CADPS2Q86UW7 1296 aa17.37■□□□□ 0.37
ARHGEF1-216ENST00000598587 SIN3AQ96ST3 1273 aa17.37■□□□□ 0.37
ARHGEF1-216ENST00000598587 ARHGEF28Q8N1W1 1705 aaKnown RBP17.37■□□□□ 0.37
ARHGEF1-216ENST00000598587 TONSLQ96HA7 1378 aa17.37■□□□□ 0.37
ARHGEF1-216ENST00000598587 ROBO2Q9HCK4 1378 aa17.37■□□□□ 0.37
ARHGEF1-216ENST00000598587 CDC42BPGQ6DT37 1551 aa17.36■□□□□ 0.37
ARHGEF1-216ENST00000598587 TRPM1Q7Z4N2 1603 aa17.36■□□□□ 0.37
ARHGEF1-216ENST00000598587 FAM135BQ49AJ0 1406 aa17.36■□□□□ 0.37
ARHGEF1-216ENST00000598587 TMEM132EQ6IEE7 984 aa17.35■□□□□ 0.37
ARHGEF1-216ENST00000598587 STK26Q9P289 416 aa17.35■□□□□ 0.37
ARHGEF1-216ENST00000598587 CLSPNQ9HAW4 1339 aa17.34■□□□□ 0.37
ARHGEF1-216ENST00000598587 L3MBTL2Q969R5 705 aa17.33■□□□□ 0.36
ARHGEF1-216ENST00000598587 PHLPP1O60346 1717 aa17.32■□□□□ 0.36
ARHGEF1-216ENST00000598587 FMN2Q9NZ56 1722 aa17.31■□□□□ 0.36
ARHGEF1-216ENST00000598587 SIRT1Q96EB6 747 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms