RNA–Protein interactions for RNA: ENST00000597507.1

C19orf54-207, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 947 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-207ENST00000597507 JCADQ9P266 1359 aa25.78■■□□□ 1.72
C19orf54-207ENST00000597507 ADGRB3O60242 1522 aa25.77■■□□□ 1.72
C19orf54-207ENST00000597507 SLC52A1Q9NWF4 448 aa25.75■■□□□ 1.71
C19orf54-207ENST00000597507 CHD2O14647 1828 aaKnown RBP25.74■■□□□ 1.71
C19orf54-207ENST00000597507 MYO5BQ9ULV0 1848 aa25.72■■□□□ 1.71
C19orf54-207ENST00000597507 ANKRD30AQ9BXX3 1397 aa25.72■■□□□ 1.71
C19orf54-207ENST00000597507 COL16A1Q07092 1604 aaPredicted RBP25.71■■□□□ 1.71
C19orf54-207ENST00000597507 ZFYVE9O95405 1425 aa25.7■■□□□ 1.7
C19orf54-207ENST00000597507 LRP6O75581 1613 aa25.69■■□□□ 1.7
C19orf54-207ENST00000597507 PLEKHG1Q9ULL1 1385 aa25.69■■□□□ 1.7
C19orf54-207ENST00000597507 FGD6Q6ZV73 1430 aa25.67■■□□□ 1.7
C19orf54-207ENST00000597507 UPF1Q92900 1129 aaKnown RBP eCLIP25.67■■□□□ 1.71e-11■■■■□ 21.3
C19orf54-207ENST00000597507 RIMS2Q9UQ26 1411 aa25.64■■□□□ 1.7
C19orf54-207ENST00000597507 TBX22Q9Y458 520 aa25.64■■□□□ 1.7
C19orf54-207ENST00000597507 SPATA31A6Q5VVP1 1343 aa25.63■■□□□ 1.69
C19orf54-207ENST00000597507 PPP1R15AO75807 674 aaPredicted RBP25.63■■□□□ 1.69
C19orf54-207ENST00000597507 TRIM52Q96A61 297 aa25.63■■□□□ 1.69
C19orf54-207ENST00000597507 GCC2Q8IWJ2 1684 aa25.62■■□□□ 1.69
C19orf54-207ENST00000597507 MEX3CQ5U5Q3 659 aaKnown RBP25.62■■□□□ 1.69
C19orf54-207ENST00000597507 ZNF772Q68DY9 489 aaPredicted RBP25.62■■□□□ 1.69
C19orf54-207ENST00000597507 HDGFP51858 240 aaKnown RBP25.61■■□□□ 1.69
C19orf54-207ENST00000597507 C14orf37Q86TY3 774 aa25.61■■□□□ 1.69
C19orf54-207ENST00000597507 TMEM131LA2VDJ0 1609 aa25.61■■□□□ 1.69
C19orf54-207ENST00000597507 NCOA3Q9Y6Q9 1424 aa25.61■■□□□ 1.69
C19orf54-207ENST00000597507 RPRD2Q5VT52 1461 aaKnown RBP25.6■■□□□ 1.69
C19orf54-207ENST00000597507 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.6■■□□□ 1.69
C19orf54-207ENST00000597507 APLP2Q06481 763 aa25.58■■□□□ 1.69
C19orf54-207ENST00000597507 NUTM2DQ5VT03 806 aaPredicted RBP25.58■■□□□ 1.69
C19orf54-207ENST00000597507 C19orf44Q9H6X5 657 aa25.58■■□□□ 1.69
C19orf54-207ENST00000597507 ADAMTS13Q76LX8 1427 aa25.57■■□□□ 1.68
C19orf54-207ENST00000597507 AHDC1Q5TGY3 1603 aaPredicted RBP25.57■■□□□ 1.68
C19orf54-207ENST00000597507 CADPS2Q86UW7 1296 aa25.57■■□□□ 1.68
C19orf54-207ENST00000597507 ADGRL2O95490 1459 aa25.57■■□□□ 1.68
C19orf54-207ENST00000597507 SHPRHQ149N8 1683 aa25.56■■□□□ 1.68
C19orf54-207ENST00000597507 ATF3P18847 181 aa25.55■■□□□ 1.68
C19orf54-207ENST00000597507 ANKRD50Q9ULJ7 1429 aa25.54■■□□□ 1.68
C19orf54-207ENST00000597507 CHGAP10645 457 aaKnown RBP25.54■■□□□ 1.68
C19orf54-207ENST00000597507 RXRBP28702 533 aa25.53■■□□□ 1.68
C19orf54-207ENST00000597507 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.53■■□□□ 1.68
C19orf54-207ENST00000597507 BRINP3Q76B58 766 aa25.51■■□□□ 1.67
C19orf54-207ENST00000597507 NUTM2BA6NNL0 878 aaPredicted RBP25.5■■□□□ 1.67
C19orf54-207ENST00000597507 NUTM2EB1AL46 878 aaPredicted RBP25.5■■□□□ 1.67
C19orf54-207ENST00000597507 NUTM2AQ8IVF1 878 aaPredicted RBP25.5■■□□□ 1.67
C19orf54-207ENST00000597507 DIP2AQ14689 1571 aa25.49■■□□□ 1.67
C19orf54-207ENST00000597507 PIK3R4Q99570 1358 aa25.49■■□□□ 1.67
C19orf54-207ENST00000597507 AMOTL2Q9Y2J4 779 aa25.48■■□□□ 1.67
C19orf54-207ENST00000597507 FAM50AQ14320 339 aaKnown RBP25.47■■□□□ 1.67
C19orf54-207ENST00000597507 PTPRUQ92729 1446 aa25.46■■□□□ 1.67
C19orf54-207ENST00000597507 E9PCH4 1651 aa25.45■■□□□ 1.66
C19orf54-207ENST00000597507 AFF2P51816 1311 aa25.43■■□□□ 1.66
C19orf54-207ENST00000597507 CDK12Q9NYV4 1490 aaPredicted RBP25.43■■□□□ 1.66
C19orf54-207ENST00000597507 SRCAPQ6ZRS2 3230 aa25.41■■□□□ 1.66
C19orf54-207ENST00000597507 TRPM2O94759 1503 aa25.41■■□□□ 1.66
C19orf54-207ENST00000597507 UNC13BO14795 1591 aa25.4■■□□□ 1.66
C19orf54-207ENST00000597507 SETD5Q9C0A6 1442 aa25.39■■□□□ 1.66
C19orf54-207ENST00000597507 ASXL1Q8IXJ9 1541 aa25.38■■□□□ 1.65
C19orf54-207ENST00000597507 DCCP43146 1447 aa25.37■■□□□ 1.65
C19orf54-207ENST00000597507 MST1RQ04912 1400 aa25.36■■□□□ 1.65
C19orf54-207ENST00000597507 NHSL1Q5SYE7 1610 aa25.35■■□□□ 1.65
C19orf54-207ENST00000597507 DDX17Q92841 729 aaKnown RBP25.35■■□□□ 1.65
C19orf54-207ENST00000597507 LRRC59Q96AG4 307 aaKnown RBP25.35■■□□□ 1.65
C19orf54-207ENST00000597507 QTRT2Q9H974 415 aaKnown RBP25.35■■□□□ 1.65
C19orf54-207ENST00000597507 C8orf37Q96NL8 207 aa25.34■■□□□ 1.65
C19orf54-207ENST00000597507 XRN1Q8IZH2 1706 aaKnown RBP25.34■■□□□ 1.65
C19orf54-207ENST00000597507 NRXN3Q9Y4C0 1643 aa25.34■■□□□ 1.65
C19orf54-207ENST00000597507 RGS12O14924 1447 aa25.33■■□□□ 1.65
C19orf54-207ENST00000597507 IQGAP3Q86VI3 1631 aa25.32■■□□□ 1.64
C19orf54-207ENST00000597507 RBM6P78332 1123 aaKnown RBP25.31■■□□□ 1.64
C19orf54-207ENST00000597507 METP08581 1390 aa25.3■■□□□ 1.64
C19orf54-207ENST00000597507 PNPLA6Q8IY17 1366 aa25.3■■□□□ 1.64
C19orf54-207ENST00000597507 SETBP1Q9Y6X0 1596 aa25.27■■□□□ 1.64
C19orf54-207ENST00000597507 NUP155O75694 1391 aa25.27■■□□□ 1.64
C19orf54-207ENST00000597507 ADAMTS2O95450 1211 aa25.24■■□□□ 1.63
C19orf54-207ENST00000597507 ADGRL3Q9HAR2 1447 aa25.23■■□□□ 1.63
C19orf54-207ENST00000597507 ROCK1Q13464 1354 aa25.23■■□□□ 1.63
C19orf54-207ENST00000597507 NGLY1Q96IV0 654 aa25.23■■□□□ 1.63
C19orf54-207ENST00000597507 ZNF326Q5BKZ1 582 aaKnown RBP25.22■■□□□ 1.63
C19orf54-207ENST00000597507 NALCNQ8IZF0 1738 aa25.2■■□□□ 1.63
C19orf54-207ENST00000597507 SPHKAPQ2M3C7 1700 aa25.17■■□□□ 1.62
C19orf54-207ENST00000597507 C1orf167Q5SNV9 1468 aa25.17■■□□□ 1.62
C19orf54-207ENST00000597507 ORAI2Q96SN7 254 aa25.14■■□□□ 1.62
C19orf54-207ENST00000597507 USP21Q9UK80 565 aa25.14■■□□□ 1.62
C19orf54-207ENST00000597507 ATAD2Q6PL18 1390 aa25.14■■□□□ 1.61
C19orf54-207ENST00000597507 SOS2Q07890 1332 aaPredicted RBP25.13■■□□□ 1.61
C19orf54-207ENST00000597507 LAMC1P11047 1609 aa25.13■■□□□ 1.61
C19orf54-207ENST00000597507 ITGAEP38570 1179 aa25.13■■□□□ 1.61
C19orf54-207ENST00000597507 EP400Q96L91 3159 aa25.13■■□□□ 1.61
C19orf54-207ENST00000597507 NEXMIFQ5QGS0 1516 aa25.12■■□□□ 1.61
C19orf54-207ENST00000597507 FNBP4Q8N3X1 1017 aaPredicted RBP25.11■■□□□ 1.61
C19orf54-207ENST00000597507 TRPC5Q9UL62 973 aaPredicted RBP25.11■■□□□ 1.61
C19orf54-207ENST00000597507 CLTCL1P53675 1640 aa25.08■■□□□ 1.6
C19orf54-207ENST00000597507 ROBO2Q9HCK4 1378 aa25.07■■□□□ 1.6
C19orf54-207ENST00000597507 PTCH1Q13635 1447 aa25.06■■□□□ 1.6
C19orf54-207ENST00000597507 ZRANB1Q9UGI0 708 aa25.06■■□□□ 1.6
C19orf54-207ENST00000597507 ATRNO75882 1429 aa25.05■■□□□ 1.6
C19orf54-207ENST00000597507 KIF1BO60333 1816 aa25.02■■□□□ 1.6
C19orf54-207ENST00000597507 COL22A1Q8NFW1 1626 aaPredicted RBP25.01■■□□□ 1.59
C19orf54-207ENST00000597507 BCL9LQ86UU0 1499 aa24.99■■□□□ 1.59
C19orf54-207ENST00000597507 FOXD1Q16676 465 aa24.98■■□□□ 1.59
C19orf54-207ENST00000597507 MYOM2P54296 1465 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms