RNA–Protein interactions for RNA: ENST00000597354.1

CAPN12-206, Transcript of calpain 12, humanhuman

TSL 3

Gene CAPN12, Length 519 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-206ENST00000597354 KIF1BO60333 1816 aa24.69■■□□□ 1.54
CAPN12-206ENST00000597354 PPP1R15AO75807 674 aaPredicted RBP24.68■■□□□ 1.54
CAPN12-206ENST00000597354 IQGAP1P46940 1657 aa24.68■■□□□ 1.54
CAPN12-206ENST00000597354 CCDC144AA2RUR9 1427 aa24.68■■□□□ 1.54
CAPN12-206ENST00000597354 ZFYVE9O95405 1425 aa24.68■■□□□ 1.54
CAPN12-206ENST00000597354 BCANQ96GW7 911 aa24.67■■□□□ 1.54
CAPN12-206ENST00000597354 ZNF335Q9H4Z2 1342 aaPredicted RBP24.65■■□□□ 1.54
CAPN12-206ENST00000597354 HDGFP51858 240 aaKnown RBP24.64■■□□□ 1.54
CAPN12-206ENST00000597354 RGL3Q3MIN7 710 aa24.62■■□□□ 1.53
CAPN12-206ENST00000597354 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.62■■□□□ 1.53
CAPN12-206ENST00000597354 SLC26A8Q96RN1 970 aa24.62■■□□□ 1.53
CAPN12-206ENST00000597354 PCGF6Q9BYE7 350 aa24.61■■□□□ 1.53
CAPN12-206ENST00000597354 ANKRD30BQ9BXX2 1392 aa24.6■■□□□ 1.53
CAPN12-206ENST00000597354 PLEKHG1Q9ULL1 1385 aa24.57■■□□□ 1.52
CAPN12-206ENST00000597354 NEXMIFQ5QGS0 1516 aa24.57■■□□□ 1.52
CAPN12-206ENST00000597354 LTBP4Q8N2S1 1624 aa24.55■■□□□ 1.52
CAPN12-206ENST00000597354 SPATA31E1Q6ZUB1 1445 aa24.54■■□□□ 1.52
CAPN12-206ENST00000597354 CERKQ8TCT0 537 aa24.53■■□□□ 1.52
CAPN12-206ENST00000597354 RPGRIP1LQ68CZ1 1315 aa24.51■■□□□ 1.51
CAPN12-206ENST00000597354 DHX57Q6P158 1386 aaKnown RBP24.49■■□□□ 1.51
CAPN12-206ENST00000597354 STRCP1A6NGW2 1772 aa24.49■■□□□ 1.51
CAPN12-206ENST00000597354 PPLO60437 1756 aa24.49■■□□□ 1.51
CAPN12-206ENST00000597354 VGFO15240 615 aaPredicted RBP24.48■■□□□ 1.51
CAPN12-206ENST00000597354 ADAMTS13Q76LX8 1427 aa24.48■■□□□ 1.51
CAPN12-206ENST00000597354 TBX22Q9Y458 520 aa24.46■■□□□ 1.51
CAPN12-206ENST00000597354 NRXN3Q9Y4C0 1643 aa24.46■■□□□ 1.51
CAPN12-206ENST00000597354 ADGRF5Q8IZF2 1346 aa24.45■■□□□ 1.5
CAPN12-206ENST00000597354 SETBP1Q9Y6X0 1596 aa24.43■■□□□ 1.5
CAPN12-206ENST00000597354 IFT172Q9UG01 1749 aa24.43■■□□□ 1.5
CAPN12-206ENST00000597354 CPS1P31327 1500 aa24.42■■□□□ 1.5
CAPN12-206ENST00000597354 KCNA6P17658 529 aa24.42■■□□□ 1.5
CAPN12-206ENST00000597354 SIN3AQ96ST3 1273 aa24.42■■□□□ 1.5
CAPN12-206ENST00000597354 KDM2AQ9Y2K7 1162 aa24.4■■□□□ 1.5
CAPN12-206ENST00000597354 DIP2AQ14689 1571 aa24.4■■□□□ 1.5
CAPN12-206ENST00000597354 NEUROD1Q13562 356 aa24.39■■□□□ 1.49
CAPN12-206ENST00000597354 RBM33Q96EV2 1170 aaKnown RBP24.39■■□□□ 1.49
CAPN12-206ENST00000597354 METP08581 1390 aa24.38■■□□□ 1.49
CAPN12-206ENST00000597354 CHD2O14647 1828 aaKnown RBP24.38■■□□□ 1.49
CAPN12-206ENST00000597354 LRRC7Q96NW7 1537 aa24.37■■□□□ 1.49
CAPN12-206ENST00000597354 DCAF11Q8TEB1 546 aa24.37■■□□□ 1.49
CAPN12-206ENST00000597354 PTPRUQ92729 1446 aa24.35■■□□□ 1.49
CAPN12-206ENST00000597354 ALKQ9UM73 1620 aa24.35■■□□□ 1.49
CAPN12-206ENST00000597354 PROSER2Q86WR7 435 aaPredicted RBP24.35■■□□□ 1.49
CAPN12-206ENST00000597354 AMOTL2Q9Y2J4 779 aa24.35■■□□□ 1.49
CAPN12-206ENST00000597354 NWD1Q149M9 1564 aa24.34■■□□□ 1.49
CAPN12-206ENST00000597354 PIK3R4Q99570 1358 aa24.32■■□□□ 1.48
CAPN12-206ENST00000597354 SETD1AO15047 1707 aaKnown RBP24.31■■□□□ 1.48
CAPN12-206ENST00000597354 MYOM2P54296 1465 aa24.31■■□□□ 1.48
CAPN12-206ENST00000597354 TMEM94Q12767 1356 aa24.3■■□□□ 1.48
CAPN12-206ENST00000597354 PIK3C2GO75747 1445 aa24.3■■□□□ 1.48
CAPN12-206ENST00000597354 FBXO41Q8TF61 875 aa24.3■■□□□ 1.48
CAPN12-206ENST00000597354 IQSEC2Q5JU85 1478 aa24.3■■□□□ 1.48
CAPN12-206ENST00000597354 TMEM132EQ6IEE7 984 aa24.29■■□□□ 1.48
CAPN12-206ENST00000597354 NKTRP30414 1462 aaKnown RBP24.29■■□□□ 1.48
CAPN12-206ENST00000597354 XIRP1Q702N8 1843 aaKnown RBP24.28■■□□□ 1.48
CAPN12-206ENST00000597354 UBAP1LF5GYI3 381 aa24.28■■□□□ 1.48
CAPN12-206ENST00000597354 CFAP70Q5T0N1 1121 aa24.28■■□□□ 1.48
CAPN12-206ENST00000597354 ILDR1Q86SU0 546 aaPredicted RBP24.28■■□□□ 1.48
CAPN12-206ENST00000597354 NRXN1Q9ULB1 1477 aa24.27■■□□□ 1.48
CAPN12-206ENST00000597354 L3MBTL2Q969R5 705 aa24.25■■□□□ 1.47
CAPN12-206ENST00000597354 C14orf93Q9H972 538 aaKnown RBP24.25■■□□□ 1.47
CAPN12-206ENST00000597354 STK26Q9P289 416 aa24.25■■□□□ 1.47
CAPN12-206ENST00000597354 XRN1Q8IZH2 1706 aaKnown RBP24.24■■□□□ 1.47
CAPN12-206ENST00000597354 ASXL1Q8IXJ9 1541 aa24.22■■□□□ 1.47
CAPN12-206ENST00000597354 C14orf37Q86TY3 774 aa24.22■■□□□ 1.47
CAPN12-206ENST00000597354 SCAF1Q9H7N4 1312 aaKnown RBP24.19■■□□□ 1.46
CAPN12-206ENST00000597354 PIP4K2BP78356 416 aa24.19■■□□□ 1.46
CAPN12-206ENST00000597354 STAC3Q96MF2 364 aa24.19■■□□□ 1.46
CAPN12-206ENST00000597354 TOM1O60784 492 aa24.18■■□□□ 1.46
CAPN12-206ENST00000597354 ROBO2Q9HCK4 1378 aa24.17■■□□□ 1.46
CAPN12-206ENST00000597354 LAMC1P11047 1609 aa24.16■■□□□ 1.46
CAPN12-206ENST00000597354 LRPPRCP42704 1394 aaKnown RBP24.16■■□□□ 1.46
CAPN12-206ENST00000597354 MSH6P52701 1360 aa24.16■■□□□ 1.46
CAPN12-206ENST00000597354 YTHDC2Q9H6S0 1430 aaKnown RBP24.15■■□□□ 1.46
CAPN12-206ENST00000597354 CCER1Q8TC90 406 aaPredicted RBP24.14■■□□□ 1.45
CAPN12-206ENST00000597354 PRAG1Q86YV5 1406 aa24.13■■□□□ 1.45
CAPN12-206ENST00000597354 WAPLQ7Z5K2 1190 aa24.13■■□□□ 1.45
CAPN12-206ENST00000597354 TONSLQ96HA7 1378 aa24.13■■□□□ 1.45
CAPN12-206ENST00000597354 PTCH1Q13635 1447 aa24.12■■□□□ 1.45
CAPN12-206ENST00000597354 NCOA3Q9Y6Q9 1424 aa24.1■■□□□ 1.45
CAPN12-206ENST00000597354 C19orf44Q9H6X5 657 aa24.1■■□□□ 1.45
CAPN12-206ENST00000597354 ABCC11Q96J66 1382 aa24.1■■□□□ 1.45
CAPN12-206ENST00000597354 ADGRB1O14514 1584 aa24.1■■□□□ 1.45
CAPN12-206ENST00000597354 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.1■■□□□ 1.45
CAPN12-206ENST00000597354 PLEKHH1Q9ULM0 1364 aa24.09■■□□□ 1.45
CAPN12-206ENST00000597354 NBPF1Q3BBV0 1214 aa24.09■■□□□ 1.45
CAPN12-206ENST00000597354 TRAK1Q9UPV9 953 aa24.09■■□□□ 1.45
CAPN12-206ENST00000597354 KNDC1Q76NI1 1749 aa24.07■■□□□ 1.44
CAPN12-206ENST00000597354 ATF3P18847 181 aa24.07■■□□□ 1.44
CAPN12-206ENST00000597354 TECPR2O15040 1411 aa24.07■■□□□ 1.44
CAPN12-206ENST00000597354 NALCNQ8IZF0 1738 aa24.07■■□□□ 1.44
CAPN12-206ENST00000597354 SAFB2Q14151 953 aaKnown RBP eCLIP24.06■■□□□ 1.44
CAPN12-206ENST00000597354 ADGRL3Q9HAR2 1447 aa24.05■■□□□ 1.44
CAPN12-206ENST00000597354 NBPF8Q3BBV2 869 aa24.05■■□□□ 1.44
CAPN12-206ENST00000597354 PRAM1Q96QH2 718 aa24.04■■□□□ 1.44
CAPN12-206ENST00000597354 CADPS2Q86UW7 1296 aa24.03■■□□□ 1.44
CAPN12-206ENST00000597354 SLAIN2Q9P270 581 aa24.03■■□□□ 1.44
CAPN12-206ENST00000597354 KIAA1210Q9ULL0 1709 aa24.03■■□□□ 1.44
CAPN12-206ENST00000597354 POGKQ9P215 609 aa24.02■■□□□ 1.44
CAPN12-206ENST00000597354 CLSPNQ9HAW4 1339 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms