RNA–Protein interactions for RNA: ENST00000596809.5

C19orf54-205, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 5

Gene C19orf54, Length 1,104 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-205ENST00000596809 RIMS2Q9UQ26 1411 aa32.54■■■□□ 2.8
C19orf54-205ENST00000596809 PPP1R15AO75807 674 aaPredicted RBP32.53■■■□□ 2.8
C19orf54-205ENST00000596809 KCNA6P17658 529 aa32.52■■■□□ 2.8
C19orf54-205ENST00000596809 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.51■■■□□ 2.79
C19orf54-205ENST00000596809 SENP3Q9H4L4 574 aaPredicted RBP32.51■■■□□ 2.79
C19orf54-205ENST00000596809 HFM1A2PYH4 1435 aa32.5■■■□□ 2.79
C19orf54-205ENST00000596809 PLEKHG1Q9ULL1 1385 aa32.49■■■□□ 2.79
C19orf54-205ENST00000596809 TRIM52Q96A61 297 aa32.46■■■□□ 2.79
C19orf54-205ENST00000596809 MYO5BQ9ULV0 1848 aa32.45■■■□□ 2.79
C19orf54-205ENST00000596809 NUTM2DQ5VT03 806 aaPredicted RBP32.45■■■□□ 2.79
C19orf54-205ENST00000596809 HSPA1LP34931 641 aa32.43■■■□□ 2.78
C19orf54-205ENST00000596809 ALKQ9UM73 1620 aa32.43■■■□□ 2.78
C19orf54-205ENST00000596809 PROSER2Q86WR7 435 aaPredicted RBP32.41■■■□□ 2.78
C19orf54-205ENST00000596809 TBX22Q9Y458 520 aa32.41■■■□□ 2.78
C19orf54-205ENST00000596809 DISP3Q9P2K9 1392 aa32.4■■■□□ 2.78
C19orf54-205ENST00000596809 TMEM94Q12767 1356 aa32.39■■■□□ 2.78
C19orf54-205ENST00000596809 RBM33Q96EV2 1170 aaKnown RBP32.36■■■□□ 2.77
C19orf54-205ENST00000596809 SPHKAPQ2M3C7 1700 aa32.35■■■□□ 2.77
C19orf54-205ENST00000596809 SLC4A1APQ9BWU0 796 aaKnown RBP32.35■■■□□ 2.77
C19orf54-205ENST00000596809 ZNF326Q5BKZ1 582 aaKnown RBP32.34■■■□□ 2.77
C19orf54-205ENST00000596809 ADAMTS13Q76LX8 1427 aa32.32■■■□□ 2.76
C19orf54-205ENST00000596809 XIRP1Q702N8 1843 aaKnown RBP32.31■■■□□ 2.76
C19orf54-205ENST00000596809 NKTRP30414 1462 aaKnown RBP32.31■■■□□ 2.76
C19orf54-205ENST00000596809 NWD1Q149M9 1564 aa32.31■■■□□ 2.76
C19orf54-205ENST00000596809 TRPM2O94759 1503 aa32.29■■■□□ 2.76
C19orf54-205ENST00000596809 CLTCL1P53675 1640 aa32.25■■■□□ 2.75
C19orf54-205ENST00000596809 PIK3R4Q99570 1358 aa32.24■■■□□ 2.75
C19orf54-205ENST00000596809 CHD2O14647 1828 aaKnown RBP32.22■■■□□ 2.75
C19orf54-205ENST00000596809 DIP2AQ14689 1571 aa32.22■■■□□ 2.75
C19orf54-205ENST00000596809 MSH6P52701 1360 aa32.2■■■□□ 2.75
C19orf54-205ENST00000596809 FOXD1Q16676 465 aa32.19■■■□□ 2.74
C19orf54-205ENST00000596809 FAM135BQ49AJ0 1406 aa32.18■■■□□ 2.74
C19orf54-205ENST00000596809 AMOTL2Q9Y2J4 779 aa32.18■■■□□ 2.74
C19orf54-205ENST00000596809 ILDR2Q71H61 639 aa32.17■■■□□ 2.74
C19orf54-205ENST00000596809 MPHOSPH9Q99550 1183 aa32.16■■■□□ 2.74
C19orf54-205ENST00000596809 NCOA3Q9Y6Q9 1424 aa32.15■■■□□ 2.74
C19orf54-205ENST00000596809 PTPRUQ92729 1446 aa32.14■■■□□ 2.74
C19orf54-205ENST00000596809 NEXMIFQ5QGS0 1516 aa32.14■■■□□ 2.74
C19orf54-205ENST00000596809 C14orf37Q86TY3 774 aa32.13■■■□□ 2.73
C19orf54-205ENST00000596809 SETBP1Q9Y6X0 1596 aa32.13■■■□□ 2.73
C19orf54-205ENST00000596809 SLAIN2Q9P270 581 aa32.12■■■□□ 2.73
C19orf54-205ENST00000596809 VGFO15240 615 aaPredicted RBP32.11■■■□□ 2.73
C19orf54-205ENST00000596809 NRXN3Q9Y4C0 1643 aa32.11■■■□□ 2.73
C19orf54-205ENST00000596809 SETD5Q9C0A6 1442 aa32.1■■■□□ 2.73
C19orf54-205ENST00000596809 KIF1BO60333 1816 aa32.1■■■□□ 2.73
C19orf54-205ENST00000596809 RPGRIP1LQ68CZ1 1315 aa32.1■■■□□ 2.73
C19orf54-205ENST00000596809 ACIN1Q9UKV3 1341 aaKnown RBP32.1■■■□□ 2.73
C19orf54-205ENST00000596809 METP08581 1390 aa32.09■■■□□ 2.73
C19orf54-205ENST00000596809 C19orf44Q9H6X5 657 aa32.08■■■□□ 2.73
C19orf54-205ENST00000596809 MED1Q15648 1581 aaPredicted RBP32.03■■■□□ 2.72
C19orf54-205ENST00000596809 CADPS2Q86UW7 1296 aa32.03■■■□□ 2.72
C19orf54-205ENST00000596809 CCDC144AA2RUR9 1427 aa32.02■■■□□ 2.72
C19orf54-205ENST00000596809 ATF3P18847 181 aa32.02■■■□□ 2.72
C19orf54-205ENST00000596809 ROBO1Q9Y6N7 1651 aa32.01■■■□□ 2.71
C19orf54-205ENST00000596809 RAB3GAP2Q9H2M9 1393 aa31.97■■■□□ 2.71
C19orf54-205ENST00000596809 RGL3Q3MIN7 710 aa31.97■■■□□ 2.71
C19orf54-205ENST00000596809 XRN1Q8IZH2 1706 aaKnown RBP31.97■■■□□ 2.71
C19orf54-205ENST00000596809 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.94■■■□□ 2.7
C19orf54-205ENST00000596809 SPATA31E1Q6ZUB1 1445 aa31.92■■■□□ 2.7
C19orf54-205ENST00000596809 PHF23Q9BUL5 403 aaPredicted RBP31.92■■■□□ 2.7
C19orf54-205ENST00000596809 SOCS7O14512 581 aa31.89■■■□□ 2.7
C19orf54-205ENST00000596809 ADGRF5Q8IZF2 1346 aa31.89■■■□□ 2.7
C19orf54-205ENST00000596809 DCCP43146 1447 aa31.88■■■□□ 2.69
C19orf54-205ENST00000596809 PPLO60437 1756 aa31.88■■■□□ 2.69
C19orf54-205ENST00000596809 ANKRD30BQ9BXX2 1392 aa31.86■■■□□ 2.69
C19orf54-205ENST00000596809 BRINP3Q76B58 766 aa31.83■■■□□ 2.69
C19orf54-205ENST00000596809 ADGRL3Q9HAR2 1447 aa31.83■■■□□ 2.69
C19orf54-205ENST00000596809 ROBO2Q9HCK4 1378 aa31.82■■■□□ 2.69
C19orf54-205ENST00000596809 SETD1AO15047 1707 aaKnown RBP31.82■■■□□ 2.68
C19orf54-205ENST00000596809 HRCP23327 699 aa31.81■■■□□ 2.68
C19orf54-205ENST00000596809 PTCH1Q13635 1447 aa31.81■■■□□ 2.68
C19orf54-205ENST00000596809 PHLPP1O60346 1717 aa31.8■■■□□ 2.68
C19orf54-205ENST00000596809 JCADQ9P266 1359 aa31.79■■■□□ 2.68
C19orf54-205ENST00000596809 MST1RQ04912 1400 aa31.78■■■□□ 2.68
C19orf54-205ENST00000596809 PRAG1Q86YV5 1406 aa31.77■■■□□ 2.68
C19orf54-205ENST00000596809 RGS17Q9UGC6 210 aaPredicted RBP31.74■■■□□ 2.67
C19orf54-205ENST00000596809 COL16A1Q07092 1604 aaPredicted RBP31.73■■■□□ 2.67
C19orf54-205ENST00000596809 AHDC1Q5TGY3 1603 aaPredicted RBP31.72■■■□□ 2.67
C19orf54-205ENST00000596809 STK26Q9P289 416 aa31.72■■■□□ 2.67
C19orf54-205ENST00000596809 TMEM132EQ6IEE7 984 aa31.71■■■□□ 2.67
C19orf54-205ENST00000596809 PIK3C2GO75747 1445 aa31.71■■■□□ 2.67
C19orf54-205ENST00000596809 IFT172Q9UG01 1749 aa31.71■■■□□ 2.67
C19orf54-205ENST00000596809 NALCNQ8IZF0 1738 aa31.7■■■□□ 2.67
C19orf54-205ENST00000596809 ASXL1Q8IXJ9 1541 aa31.69■■■□□ 2.66
C19orf54-205ENST00000596809 LRPPRCP42704 1394 aaKnown RBP31.68■■■□□ 2.66
C19orf54-205ENST00000596809 C14orf93Q9H972 538 aaKnown RBP31.67■■■□□ 2.66
C19orf54-205ENST00000596809 C1orf167Q5SNV9 1468 aa31.65■■■□□ 2.66
C19orf54-205ENST00000596809 SPATA31A6Q5VVP1 1343 aa31.65■■■□□ 2.66
C19orf54-205ENST00000596809 ABCC11Q96J66 1382 aa31.65■■■□□ 2.66
C19orf54-205ENST00000596809 WAPLQ7Z5K2 1190 aa31.64■■■□□ 2.66
C19orf54-205ENST00000596809 TECPR2O15040 1411 aa31.63■■■□□ 2.65
C19orf54-205ENST00000596809 CFAP70Q5T0N1 1121 aa31.62■■■□□ 2.65
C19orf54-205ENST00000596809 DDX17Q92841 729 aaKnown RBP31.62■■■□□ 2.65
C19orf54-205ENST00000596809 NRXN1Q9ULB1 1477 aa31.62■■■□□ 2.65
C19orf54-205ENST00000596809 MYOM2P54296 1465 aa31.61■■■□□ 2.65
C19orf54-205ENST00000596809 ORAI2Q96SN7 254 aa31.61■■■□□ 2.65
C19orf54-205ENST00000596809 LRRC59Q96AG4 307 aaKnown RBP31.6■■■□□ 2.65
C19orf54-205ENST00000596809 YTHDC2Q9H6S0 1430 aaKnown RBP31.59■■■□□ 2.65
C19orf54-205ENST00000596809 POTEAQ6S8J7 498 aa31.57■■■□□ 2.64
C19orf54-205ENST00000596809 SIRT1Q96EB6 747 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms