RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 CPS1P31327 1500 aa31.49■■■□□ 2.63
PNKP-209ENST00000596726 STRCP1A6NGW2 1772 aa31.48■■■□□ 2.63
PNKP-209ENST00000596726 HDGFP51858 240 aaKnown RBP31.46■■■□□ 2.63
PNKP-209ENST00000596726 RAB3GAP2Q9H2M9 1393 aa31.44■■■□□ 2.62
PNKP-209ENST00000596726 MPHOSPH9Q99550 1183 aa31.44■■■□□ 2.62
PNKP-209ENST00000596726 KIF1BO60333 1816 aa31.42■■■□□ 2.62
PNKP-209ENST00000596726 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.42■■■□□ 2.62
PNKP-209ENST00000596726 PLEKHG1Q9ULL1 1385 aa31.42■■■□□ 2.62
PNKP-209ENST00000596726 FOXD1Q16676 465 aa31.38■■■□□ 2.61
PNKP-209ENST00000596726 PPP1R15AO75807 674 aaPredicted RBP31.37■■■□□ 2.61
PNKP-209ENST00000596726 SLC26A8Q96RN1 970 aa31.36■■■□□ 2.61
PNKP-209ENST00000596726 HRCP23327 699 aa31.34■■■□□ 2.61
PNKP-209ENST00000596726 NUTM2DQ5VT03 806 aaPredicted RBP31.33■■■□□ 2.61
PNKP-209ENST00000596726 LRRC7Q96NW7 1537 aa31.32■■■□□ 2.6
PNKP-209ENST00000596726 ZNF326Q5BKZ1 582 aaKnown RBP31.31■■■□□ 2.6
PNKP-209ENST00000596726 BCANQ96GW7 911 aa31.31■■■□□ 2.6
PNKP-209ENST00000596726 NEXMIFQ5QGS0 1516 aa31.29■■■□□ 2.6
PNKP-209ENST00000596726 ADAMTS13Q76LX8 1427 aa31.29■■■□□ 2.6
PNKP-209ENST00000596726 KCNA6P17658 529 aa31.28■■■□□ 2.6
PNKP-209ENST00000596726 SENP3Q9H4L4 574 aaPredicted RBP31.28■■■□□ 2.6
PNKP-209ENST00000596726 TBX22Q9Y458 520 aa31.28■■■□□ 2.6
PNKP-209ENST00000596726 DIP2AQ14689 1571 aa31.26■■■□□ 2.6
PNKP-209ENST00000596726 NWD1Q149M9 1564 aa31.26■■■□□ 2.6
PNKP-209ENST00000596726 CHD2O14647 1828 aaKnown RBP31.26■■■□□ 2.6
PNKP-209ENST00000596726 CCDC144AA2RUR9 1427 aa31.24■■■□□ 2.59
PNKP-209ENST00000596726 XIRP1Q702N8 1843 aaKnown RBP31.24■■■□□ 2.59
PNKP-209ENST00000596726 NRXN3Q9Y4C0 1643 aa31.24■■■□□ 2.59
PNKP-209ENST00000596726 SETBP1Q9Y6X0 1596 aa31.23■■■□□ 2.59
PNKP-209ENST00000596726 UBAP1LF5GYI3 381 aa31.23■■■□□ 2.59
PNKP-209ENST00000596726 RPGRIP1LQ68CZ1 1315 aa31.2■■■□□ 2.58
PNKP-209ENST00000596726 PPLO60437 1756 aa31.19■■■□□ 2.58
PNKP-209ENST00000596726 NKTRP30414 1462 aaKnown RBP31.19■■■□□ 2.58
PNKP-209ENST00000596726 PIK3R4Q99570 1358 aa31.18■■■□□ 2.58
PNKP-209ENST00000596726 SPATA31E1Q6ZUB1 1445 aa31.18■■■□□ 2.58
PNKP-209ENST00000596726 ALKQ9UM73 1620 aa31.16■■■□□ 2.58
PNKP-209ENST00000596726 VGFO15240 615 aaPredicted RBP31.14■■■□□ 2.58
PNKP-209ENST00000596726 TOM1O60784 492 aa31.14■■■□□ 2.58
PNKP-209ENST00000596726 PROSER2Q86WR7 435 aaPredicted RBP31.12■■■□□ 2.57
PNKP-209ENST00000596726 TMEM94Q12767 1356 aa31.12■■■□□ 2.57
PNKP-209ENST00000596726 ANKRD30BQ9BXX2 1392 aa31.11■■■□□ 2.57
PNKP-209ENST00000596726 IFT172Q9UG01 1749 aa31.1■■■□□ 2.57
PNKP-209ENST00000596726 PTPRUQ92729 1446 aa31.09■■■□□ 2.57
PNKP-209ENST00000596726 RGL3Q3MIN7 710 aa31.07■■■□□ 2.56
PNKP-209ENST00000596726 SETD1AO15047 1707 aaKnown RBP31.06■■■□□ 2.56
PNKP-209ENST00000596726 METP08581 1390 aa31.05■■■□□ 2.56
PNKP-209ENST00000596726 RBM33Q96EV2 1170 aaKnown RBP31.05■■■□□ 2.56
PNKP-209ENST00000596726 XRN1Q8IZH2 1706 aaKnown RBP31.04■■■□□ 2.56
PNKP-209ENST00000596726 AMOTL2Q9Y2J4 779 aa31.04■■■□□ 2.56
PNKP-209ENST00000596726 NCOA3Q9Y6Q9 1424 aa31.01■■■□□ 2.55
PNKP-209ENST00000596726 PIP4K2BP78356 416 aa31.01■■■□□ 2.55
PNKP-209ENST00000596726 ADGRF5Q8IZF2 1346 aa30.99■■■□□ 2.55
PNKP-209ENST00000596726 SCAF1Q9H7N4 1312 aaKnown RBP30.97■■■□□ 2.55
PNKP-209ENST00000596726 MSH6P52701 1360 aa30.93■■■□□ 2.54
PNKP-209ENST00000596726 PIK3C2GO75747 1445 aa30.91■■■□□ 2.54
PNKP-209ENST00000596726 MYOM2P54296 1465 aa30.9■■■□□ 2.54
PNKP-209ENST00000596726 TRIM26Q12899 539 aaPredicted RBP30.9■■■□□ 2.54
PNKP-209ENST00000596726 NRXN1Q9ULB1 1477 aa30.89■■■□□ 2.54
PNKP-209ENST00000596726 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.89■■■□□ 2.54
PNKP-209ENST00000596726 PRAG1Q86YV5 1406 aa30.89■■■□□ 2.53
PNKP-209ENST00000596726 HSPA1LP34931 641 aa30.87■■■□□ 2.53
PNKP-209ENST00000596726 C19orf44Q9H6X5 657 aa30.86■■■□□ 2.53
PNKP-209ENST00000596726 FAM135BQ49AJ0 1406 aa30.86■■■□□ 2.53
PNKP-209ENST00000596726 PTCH1Q13635 1447 aa30.84■■■□□ 2.53
PNKP-209ENST00000596726 C14orf37Q86TY3 774 aa30.84■■■□□ 2.53
PNKP-209ENST00000596726 ASXL1Q8IXJ9 1541 aa30.81■■■□□ 2.52
PNKP-209ENST00000596726 ROBO2Q9HCK4 1378 aa30.8■■■□□ 2.52
PNKP-209ENST00000596726 C14orf93Q9H972 538 aaKnown RBP30.8■■■□□ 2.52
PNKP-209ENST00000596726 SLAIN2Q9P270 581 aa30.8■■■□□ 2.52
PNKP-209ENST00000596726 ROBO1Q9Y6N7 1651 aa30.8■■■□□ 2.52
PNKP-209ENST00000596726 CADPS2Q86UW7 1296 aa30.79■■■□□ 2.52
PNKP-209ENST00000596726 DCCP43146 1447 aa30.79■■■□□ 2.52
PNKP-209ENST00000596726 DHX57Q6P158 1386 aaKnown RBP30.79■■■□□ 2.52
PNKP-209ENST00000596726 LAMC1P11047 1609 aa30.78■■■□□ 2.52
PNKP-209ENST00000596726 NALCNQ8IZF0 1738 aa30.77■■■□□ 2.52
PNKP-209ENST00000596726 STAC3Q96MF2 364 aa30.77■■■□□ 2.52
PNKP-209ENST00000596726 ADGRL3Q9HAR2 1447 aa30.77■■■□□ 2.52
PNKP-209ENST00000596726 ATF3P18847 181 aa30.76■■■□□ 2.51
PNKP-209ENST00000596726 LRPPRCP42704 1394 aaKnown RBP30.76■■■□□ 2.51
PNKP-209ENST00000596726 TECPR2O15040 1411 aa30.75■■■□□ 2.51
PNKP-209ENST00000596726 TMEM132EQ6IEE7 984 aa30.75■■■□□ 2.51
PNKP-209ENST00000596726 DCAF11Q8TEB1 546 aa30.75■■■□□ 2.51
PNKP-209ENST00000596726 KNDC1Q76NI1 1749 aa30.75■■■□□ 2.51
PNKP-209ENST00000596726 CFAP70Q5T0N1 1121 aa30.74■■■□□ 2.51
PNKP-209ENST00000596726 ABCC11Q96J66 1382 aa30.73■■■□□ 2.51
PNKP-209ENST00000596726 KDM2AQ9Y2K7 1162 aa30.71■■■□□ 2.51
PNKP-209ENST00000596726 YTHDC2Q9H6S0 1430 aaKnown RBP30.71■■■□□ 2.51
PNKP-209ENST00000596726 STK26Q9P289 416 aa30.69■■■□□ 2.5
PNKP-209ENST00000596726 MST1RQ04912 1400 aa30.67■■■□□ 2.5
PNKP-209ENST00000596726 SIRT1Q96EB6 747 aa30.65■■■□□ 2.5
PNKP-209ENST00000596726 ADGRB1O14514 1584 aa30.64■■■□□ 2.5
PNKP-209ENST00000596726 WAPLQ7Z5K2 1190 aa30.62■■■□□ 2.49
PNKP-209ENST00000596726 SIN3AQ96ST3 1273 aa30.61■■■□□ 2.49
PNKP-209ENST00000596726 PHLPP1O60346 1717 aa30.61■■■□□ 2.49
PNKP-209ENST00000596726 PLEKHH1Q9ULM0 1364 aa30.6■■■□□ 2.49
PNKP-209ENST00000596726 BRINP3Q76B58 766 aa30.59■■■□□ 2.49
PNKP-209ENST00000596726 DLC1Q96QB1 1528 aa30.57■■■□□ 2.49
PNKP-209ENST00000596726 AHDC1Q5TGY3 1603 aaPredicted RBP30.57■■■□□ 2.48
PNKP-209ENST00000596726 CDC42BPGQ6DT37 1551 aa30.57■■■□□ 2.48
PNKP-209ENST00000596726 C1orf167Q5SNV9 1468 aa30.56■■■□□ 2.48
PNKP-209ENST00000596726 KIAA1210Q9ULL0 1709 aa30.55■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms