RNA–Protein interactions for RNA: ENST00000594759.5

LIG1-207, Transcript of DNA ligase 1, humanhuman

TSL 1 (best)

Gene LIG1, Length 4,102 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-207ENST00000594759 PRG4Q92954 1404 aaPredicted RBP15.25■□□□□ 0.03
LIG1-207ENST00000594759 NUTM2DQ5VT03 806 aaPredicted RBP15.24■□□□□ 0.03
LIG1-207ENST00000594759 PLCD3Q8N3E9 789 aa15.24■□□□□ 0.03
LIG1-207ENST00000594759 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
LIG1-207ENST00000594759 NCOA1Q15788 1441 aa15.24■□□□□ 0.03
LIG1-207ENST00000594759 CENPJQ9HC77 1338 aaPredicted RBP15.23■□□□□ 0.03
LIG1-207ENST00000594759 CYB5RLQ6IPT4 315 aa15.23■□□□□ 0.03
LIG1-207ENST00000594759 SASS6Q6UVJ0 657 aa15.23■□□□□ 0.03
LIG1-207ENST00000594759 IFT140Q96RY7 1462 aa15.23■□□□□ 0.03
LIG1-207ENST00000594759 TMF1P82094 1093 aa15.23■□□□□ 0.03
LIG1-207ENST00000594759 CAVIN1Q6NZI2 390 aaKnown RBP15.23■□□□□ 0.03
LIG1-207ENST00000594759 TAF7LQ5H9L4 462 aa15.22■□□□□ 0.03
LIG1-207ENST00000594759 MCTP1Q6DN14 999 aa15.21■□□□□ 0.03
LIG1-207ENST00000594759 DRC7Q8IY82 874 aa15.21■□□□□ 0.03
LIG1-207ENST00000594759 CDK13Q14004 1512 aaKnown RBP15.21■□□□□ 0.03
LIG1-207ENST00000594759 RNF214Q8ND24 703 aa15.21■□□□□ 0.02
LIG1-207ENST00000594759 PANK3Q9H999 370 aa15.21■□□□□ 0.02
LIG1-207ENST00000594759 BCL2L13Q9BXK5 485 aa15.2■□□□□ 0.02
LIG1-207ENST00000594759 APPP05067 770 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 PANK1Q8TE04 598 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 DIAPH3Q9NSV4 1193 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 STK26Q9P289 416 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 RSPH4AQ5TD94 716 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 CASC1Q6TDU7 716 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 ADAMTS8Q9UP79 889 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 KANK1Q14678 1352 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 AFAP1Q8N556 730 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 HFM1A2PYH4 1435 aa15.19■□□□□ 0.02
LIG1-207ENST00000594759 PCF11O94913 1555 aaKnown RBP15.19■□□□□ 0.02
LIG1-207ENST00000594759 LETM1O95202 739 aaPredicted RBP15.19■□□□□ 0.02
LIG1-207ENST00000594759 EFCAB5A4FU69 1503 aa15.18■□□□□ 0.02
LIG1-207ENST00000594759 APAF1O14727 1248 aa15.18■□□□□ 0.02
LIG1-207ENST00000594759 GTPBP4Q9BZE4 634 aaKnown RBP15.18■□□□□ 0.02
LIG1-207ENST00000594759 PPP4R3BQ5MIZ7 849 aa15.17■□□□□ 0.02
LIG1-207ENST00000594759 FOXD4L5Q5VV16 416 aaPredicted RBP15.17■□□□□ 0.02
LIG1-207ENST00000594759 FOXD4L4Q8WXT5 416 aaPredicted RBP15.17■□□□□ 0.02
LIG1-207ENST00000594759 CCDC94Q9BW85 323 aaPredicted RBP15.17■□□□□ 0.02
LIG1-207ENST00000594759 KIF3AQ9Y496 699 aa15.17■□□□□ 0.02
LIG1-207ENST00000594759 CDCA8Q53HL2 280 aa15.17■□□□□ 0.02
LIG1-207ENST00000594759 PDCL2Q8N4E4 241 aa15.17■□□□□ 0.02
LIG1-207ENST00000594759 OSCARQ8IYS5 282 aa15.17■□□□□ 0.02
LIG1-207ENST00000594759 VGLL3A8MV65 326 aa15.16■□□□□ 0.02
LIG1-207ENST00000594759 BCAR3O75815 825 aa15.16■□□□□ 0.02
LIG1-207ENST00000594759 GOLGA6L6A8MZA4 724 aa15.15■□□□□ 0.02
LIG1-207ENST00000594759 PHF14O94880 888 aa15.15■□□□□ 0.02
LIG1-207ENST00000594759 KIF20AO95235 890 aa15.15■□□□□ 0.02
LIG1-207ENST00000594759 MAP3K1Q13233 1512 aa15.15■□□□□ 0.02
LIG1-207ENST00000594759 MPNDQ8N594 471 aa15.15■□□□□ 0.02
LIG1-207ENST00000594759 PAXIP1Q6ZW49 1069 aaPredicted RBP15.14■□□□□ 0.01
LIG1-207ENST00000594759 AEBP1Q8IUX7 1158 aa15.14■□□□□ 0.01
LIG1-207ENST00000594759 PDZRN3Q9UPQ7 1066 aa15.14■□□□□ 0.01
LIG1-207ENST00000594759 SPDYE4A6NLX3 237 aa15.14■□□□□ 0.01
LIG1-207ENST00000594759 NUCB2P80303 420 aa15.14■□□□□ 0.01
LIG1-207ENST00000594759 NAIPQ13075 1403 aa15.14■□□□□ 0.01
LIG1-207ENST00000594759 E9PSI1 815 aa15.13■□□□□ 0.01
LIG1-207ENST00000594759 TERF1P54274 439 aa15.13■□□□□ 0.01
LIG1-207ENST00000594759 ITPRIPQ8IWB1 547 aa15.13■□□□□ 0.01
LIG1-207ENST00000594759 CIZ1Q9ULV3 898 aaPredicted RBP15.13■□□□□ 0.01
LIG1-207ENST00000594759 ANKRD50Q9ULJ7 1429 aa15.13■□□□□ 0.01
LIG1-207ENST00000594759 KCNJ4P48050 445 aa15.13■□□□□ 0.01
LIG1-207ENST00000594759 CHMP4AQ9BY43 222 aa15.13■□□□□ 0.01
LIG1-207ENST00000594759 PLB1Q6P1J6 1458 aa15.12■□□□□ 0.01
LIG1-207ENST00000594759 EIF3AQ14152 1382 aaKnown RBP15.12■□□□□ 0.01
LIG1-207ENST00000594759 TNPO1Q92973 898 aaKnown RBP15.12■□□□□ 0.01
LIG1-207ENST00000594759 EPRSP07814 1512 aaKnown RBP15.12■□□□□ 0.01
LIG1-207ENST00000594759 TRHP20396 242 aaPredicted RBP15.11■□□□□ 0.01
LIG1-207ENST00000594759 KIAA0586Q9BVV6 1533 aa15.11■□□□□ 0.01
LIG1-207ENST00000594759 CCDC144AA2RUR9 1427 aa15.11■□□□□ 0.01
LIG1-207ENST00000594759 IGSF3O75054 1194 aa15.11■□□□□ 0.01
LIG1-207ENST00000594759 FSD2A1L4K1 749 aa15.1■□□□□ 0.01
LIG1-207ENST00000594759 TBC1D32Q96NH3 1257 aa15.1■□□□□ 0.01
LIG1-207ENST00000594759 RRP7AQ9Y3A4 280 aaKnown RBP15.1■□□□□ 0.01
LIG1-207ENST00000594759 PRPF40AO75400 957 aaKnown RBP15.1■□□□□ 0.01
LIG1-207ENST00000594759 MCM5P33992 734 aa15.09■□□□□ 0.01
LIG1-207ENST00000594759 SEC24BO95487 1268 aa15.09■□□□□ 0.01
LIG1-207ENST00000594759 CFAP44Q96MT7 982 aa15.09■□□□□ 0.01
LIG1-207ENST00000594759 SRPK2P78362 688 aaKnown RBP15.08■□□□□ 0.01
LIG1-207ENST00000594759 IQGAP2Q13576 1575 aa15.08■□□□□ 0
LIG1-207ENST00000594759 TROQ12816 1431 aaPredicted RBP15.08■□□□□ 0
LIG1-207ENST00000594759 ST18O60284 1047 aa15.07■□□□□ 0
LIG1-207ENST00000594759 FOXD4L6Q3SYB3 417 aaPredicted RBP15.07■□□□□ 0
LIG1-207ENST00000594759 FOXD4L3Q6VB84 417 aaPredicted RBP15.07■□□□□ 0
LIG1-207ENST00000594759 ZNF592Q92610 1267 aa15.07■□□□□ 0
LIG1-207ENST00000594759 TRAK1Q9UPV9 953 aa15.07■□□□□ 0
LIG1-207ENST00000594759 PDE3AQ14432 1141 aa15.07■□□□□ 0
LIG1-207ENST00000594759 ERICH4A6NGS2 130 aa15.07■□□□□ 0
LIG1-207ENST00000594759 C14orf37Q86TY3 774 aa15.07■□□□□ 0
LIG1-207ENST00000594759 CFAP53Q96M91 514 aa15.06■□□□□ 0
LIG1-207ENST00000594759 ZKSCAN5Q9Y2L8 839 aa15.06■□□□□ 0
LIG1-207ENST00000594759 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.06■□□□□ 0
LIG1-207ENST00000594759 U2SURPO15042 1029 aaKnown RBP15.06■□□□□ 0
LIG1-207ENST00000594759 HTATSF1O43719 755 aaKnown RBP15.06■□□□□ 0
LIG1-207ENST00000594759 IGHDP01880 384 aa15.06■□□□□ 0
LIG1-207ENST00000594759 KIF16BQ96L93 1317 aa15.06■□□□□ 0
LIG1-207ENST00000594759 EHBP1L1Q8N3D4 1523 aa15.05■□□□□ 0
LIG1-207ENST00000594759 DMTNQ08495 405 aa15.05■□□□□ 0
LIG1-207ENST00000594759 SMC4Q9NTJ3 1288 aa15.05■□□□□ -0
LIG1-207ENST00000594759 GRIN2AQ12879 1464 aa15.04■□□□□ -0
LIG1-207ENST00000594759 IRX3P78415 501 aaPredicted RBP15.04■□□□□ -0
LIG1-207ENST00000594759 HS1BP3Q53T59 392 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms