RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 PPP1R15AO75807 674 aaPredicted RBP28.59■■■□□ 2.17
LTBP4-208ENST00000593738 PLEKHG1Q9ULL1 1385 aa28.59■■■□□ 2.17
LTBP4-208ENST00000593738 ACIN1Q9UKV3 1341 aaKnown RBP28.58■■■□□ 2.17
LTBP4-208ENST00000593738 LRRC7Q96NW7 1537 aa28.58■■■□□ 2.17
LTBP4-208ENST00000593738 BCANQ96GW7 911 aa28.57■■■□□ 2.16
LTBP4-208ENST00000593738 SLC4A1APQ9BWU0 796 aaKnown RBP28.57■■■□□ 2.16
LTBP4-208ENST00000593738 TOM1O60784 492 aa28.56■■■□□ 2.16
LTBP4-208ENST00000593738 TRPM2O94759 1503 aa28.56■■■□□ 2.16
LTBP4-208ENST00000593738 SLC26A8Q96RN1 970 aa28.56■■■□□ 2.16
LTBP4-208ENST00000593738 KCNA6P17658 529 aa28.53■■■□□ 2.16
LTBP4-208ENST00000593738 CLTCL1P53675 1640 aa28.51■■■□□ 2.15
LTBP4-208ENST00000593738 TBX22Q9Y458 520 aa28.5■■■□□ 2.15
LTBP4-208ENST00000593738 KIF1BO60333 1816 aa28.49■■■□□ 2.15
LTBP4-208ENST00000593738 SETD5Q9C0A6 1442 aa28.47■■■□□ 2.15
LTBP4-208ENST00000593738 ZNF326Q5BKZ1 582 aaKnown RBP28.46■■■□□ 2.15
LTBP4-208ENST00000593738 NWD1Q149M9 1564 aa28.45■■■□□ 2.15
LTBP4-208ENST00000593738 NUTM2DQ5VT03 806 aaPredicted RBP28.45■■■□□ 2.14
LTBP4-208ENST00000593738 CHD2O14647 1828 aaKnown RBP28.45■■■□□ 2.14
LTBP4-208ENST00000593738 DIP2AQ14689 1571 aa28.45■■■□□ 2.14
LTBP4-208ENST00000593738 XIRP1Q702N8 1843 aaKnown RBP28.44■■■□□ 2.14
LTBP4-208ENST00000593738 NKTRP30414 1462 aaKnown RBP28.44■■■□□ 2.14
LTBP4-208ENST00000593738 PROSER2Q86WR7 435 aaPredicted RBP28.42■■■□□ 2.14
LTBP4-208ENST00000593738 MPHOSPH9Q99550 1183 aa28.42■■■□□ 2.14
LTBP4-208ENST00000593738 SENP3Q9H4L4 574 aaPredicted RBP28.42■■■□□ 2.14
LTBP4-208ENST00000593738 ADAMTS13Q76LX8 1427 aa28.42■■■□□ 2.14
LTBP4-208ENST00000593738 PIP4K2BP78356 416 aa28.41■■■□□ 2.14
LTBP4-208ENST00000593738 PIK3R4Q99570 1358 aa28.4■■■□□ 2.14
LTBP4-208ENST00000593738 SCAF1Q9H7N4 1312 aaKnown RBP28.4■■■□□ 2.14
LTBP4-208ENST00000593738 ALKQ9UM73 1620 aa28.4■■■□□ 2.14
LTBP4-208ENST00000593738 TMEM94Q12767 1356 aa28.38■■■□□ 2.13
LTBP4-208ENST00000593738 NEXMIFQ5QGS0 1516 aa28.36■■■□□ 2.13
LTBP4-208ENST00000593738 SETBP1Q9Y6X0 1596 aa28.36■■■□□ 2.13
LTBP4-208ENST00000593738 RPGRIP1LQ68CZ1 1315 aa28.35■■■□□ 2.13
LTBP4-208ENST00000593738 FOXD1Q16676 465 aa28.34■■■□□ 2.13
LTBP4-208ENST00000593738 RAB3GAP2Q9H2M9 1393 aa28.33■■■□□ 2.13
LTBP4-208ENST00000593738 VGFO15240 615 aaPredicted RBP28.32■■■□□ 2.12
LTBP4-208ENST00000593738 NRXN3Q9Y4C0 1643 aa28.32■■■□□ 2.12
LTBP4-208ENST00000593738 CCDC144AA2RUR9 1427 aa28.31■■■□□ 2.12
LTBP4-208ENST00000593738 NCOA3Q9Y6Q9 1424 aa28.3■■■□□ 2.12
LTBP4-208ENST00000593738 HRCP23327 699 aa28.28■■■□□ 2.12
LTBP4-208ENST00000593738 HSPA1LP34931 641 aa28.28■■■□□ 2.12
LTBP4-208ENST00000593738 MSH6P52701 1360 aa28.26■■■□□ 2.12
LTBP4-208ENST00000593738 RBM33Q96EV2 1170 aaKnown RBP28.26■■■□□ 2.11
LTBP4-208ENST00000593738 AMOTL2Q9Y2J4 779 aa28.26■■■□□ 2.11
LTBP4-208ENST00000593738 PPLO60437 1756 aa28.24■■■□□ 2.11
LTBP4-208ENST00000593738 PTPRUQ92729 1446 aa28.23■■■□□ 2.11
LTBP4-208ENST00000593738 FAM135BQ49AJ0 1406 aa28.21■■■□□ 2.11
LTBP4-208ENST00000593738 SPATA31E1Q6ZUB1 1445 aa28.2■■■□□ 2.11
LTBP4-208ENST00000593738 METP08581 1390 aa28.2■■■□□ 2.1
LTBP4-208ENST00000593738 XRN1Q8IZH2 1706 aaKnown RBP28.2■■■□□ 2.1
LTBP4-208ENST00000593738 C14orf37Q86TY3 774 aa28.17■■■□□ 2.1
LTBP4-208ENST00000593738 ANKRD30BQ9BXX2 1392 aa28.16■■■□□ 2.1
LTBP4-208ENST00000593738 RGL3Q3MIN7 710 aa28.16■■■□□ 2.1
LTBP4-208ENST00000593738 C19orf44Q9H6X5 657 aa28.16■■■□□ 2.1
LTBP4-208ENST00000593738 SLAIN2Q9P270 581 aa28.14■■■□□ 2.1
LTBP4-208ENST00000593738 SETD1AO15047 1707 aaKnown RBP28.13■■■□□ 2.09
LTBP4-208ENST00000593738 IFT172Q9UG01 1749 aa28.13■■■□□ 2.09
LTBP4-208ENST00000593738 DISP3Q9P2K9 1392 aa28.12■■■□□ 2.09
LTBP4-208ENST00000593738 CADPS2Q86UW7 1296 aa28.12■■■□□ 2.09
LTBP4-208ENST00000593738 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.12■■■□□ 2.09
LTBP4-208ENST00000593738 ROBO1Q9Y6N7 1651 aa28.11■■■□□ 2.09
LTBP4-208ENST00000593738 ATF3P18847 181 aa28.1■■■□□ 2.09
LTBP4-208ENST00000593738 ADGRF5Q8IZF2 1346 aa28.08■■■□□ 2.09
LTBP4-208ENST00000593738 DCCP43146 1447 aa28.07■■■□□ 2.08
LTBP4-208ENST00000593738 PTCH1Q13635 1447 aa28.04■■■□□ 2.08
LTBP4-208ENST00000593738 PRAG1Q86YV5 1406 aa28.04■■■□□ 2.08
LTBP4-208ENST00000593738 ADGRL3Q9HAR2 1447 aa28.01■■■□□ 2.07
LTBP4-208ENST00000593738 PIK3C2GO75747 1445 aa28■■■□□ 2.07
LTBP4-208ENST00000593738 MED1Q15648 1581 aaPredicted RBP27.98■■■□□ 2.07
LTBP4-208ENST00000593738 MYOM2P54296 1465 aa27.97■■■□□ 2.07
LTBP4-208ENST00000593738 ROBO2Q9HCK4 1378 aa27.97■■■□□ 2.07
LTBP4-208ENST00000593738 NRXN1Q9ULB1 1477 aa27.95■■■□□ 2.07
LTBP4-208ENST00000593738 PHLPP1O60346 1717 aa27.95■■■□□ 2.07
LTBP4-208ENST00000593738 NALCNQ8IZF0 1738 aa27.95■■■□□ 2.07
LTBP4-208ENST00000593738 STAC3Q96MF2 364 aa27.93■■■□□ 2.06
LTBP4-208ENST00000593738 C14orf93Q9H972 538 aaKnown RBP27.93■■■□□ 2.06
LTBP4-208ENST00000593738 LRPPRCP42704 1394 aaKnown RBP27.92■■■□□ 2.06
LTBP4-208ENST00000593738 LAMC1P11047 1609 aa27.92■■■□□ 2.06
LTBP4-208ENST00000593738 MST1RQ04912 1400 aa27.92■■■□□ 2.06
LTBP4-208ENST00000593738 ABCC11Q96J66 1382 aa27.91■■■□□ 2.06
LTBP4-208ENST00000593738 TECPR2O15040 1411 aa27.91■■■□□ 2.06
LTBP4-208ENST00000593738 AHDC1Q5TGY3 1603 aaPredicted RBP27.89■■■□□ 2.06
LTBP4-208ENST00000593738 BRINP3Q76B58 766 aa27.89■■■□□ 2.06
LTBP4-208ENST00000593738 KNDC1Q76NI1 1749 aa27.89■■■□□ 2.05
LTBP4-208ENST00000593738 TMEM132EQ6IEE7 984 aa27.88■■■□□ 2.05
LTBP4-208ENST00000593738 ASXL1Q8IXJ9 1541 aa27.87■■■□□ 2.05
LTBP4-208ENST00000593738 STK26Q9P289 416 aa27.87■■■□□ 2.05
LTBP4-208ENST00000593738 YTHDC2Q9H6S0 1430 aaKnown RBP27.86■■■□□ 2.05
LTBP4-208ENST00000593738 COL16A1Q07092 1604 aaPredicted RBP27.86■■■□□ 2.05
LTBP4-208ENST00000593738 CFAP70Q5T0N1 1121 aa27.85■■■□□ 2.05
LTBP4-208ENST00000593738 SIRT1Q96EB6 747 aa27.85■■■□□ 2.05
LTBP4-208ENST00000593738 DHX57Q6P158 1386 aaKnown RBP27.85■■■□□ 2.05
LTBP4-208ENST00000593738 JCADQ9P266 1359 aa27.85■■■□□ 2.05
LTBP4-208ENST00000593738 ILDR2Q71H61 639 aa27.84■■■□□ 2.05
LTBP4-208ENST00000593738 DCAF11Q8TEB1 546 aa27.84■■■□□ 2.05
LTBP4-208ENST00000593738 PHF23Q9BUL5 403 aaPredicted RBP27.82■■■□□ 2.04
LTBP4-208ENST00000593738 C1orf167Q5SNV9 1468 aa27.81■■■□□ 2.04
LTBP4-208ENST00000593738 KDM2AQ9Y2K7 1162 aa27.8■■■□□ 2.04
LTBP4-208ENST00000593738 NHSL1Q5SYE7 1610 aa27.79■■■□□ 2.04
LTBP4-208ENST00000593738 CDC42BPGQ6DT37 1551 aa27.79■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms