RNA–Protein interactions for RNA: ENST00000593699.5

LRMDA-209, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 1 (best)

Gene LRMDA, Length 1,124 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-209ENST00000593699 HFM1A2PYH4 1435 aa16.55■□□□□ 0.24
LRMDA-209ENST00000593699 NWD1Q149M9 1564 aa16.55■□□□□ 0.24
LRMDA-209ENST00000593699 NKTRP30414 1462 aaKnown RBP16.54■□□□□ 0.24
LRMDA-209ENST00000593699 PLEKHG1Q9ULL1 1385 aa16.54■□□□□ 0.24
LRMDA-209ENST00000593699 CHGAP10645 457 aaKnown RBP16.54■□□□□ 0.24
LRMDA-209ENST00000593699 BCANQ96GW7 911 aa16.54■□□□□ 0.24
LRMDA-209ENST00000593699 DIP2AQ14689 1571 aa16.54■□□□□ 0.24
LRMDA-209ENST00000593699 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.53■□□□□ 0.24
LRMDA-209ENST00000593699 PIP4K2BP78356 416 aa16.52■□□□□ 0.24
LRMDA-209ENST00000593699 TRPM2O94759 1503 aa16.51■□□□□ 0.23
LRMDA-209ENST00000593699 DISP3Q9P2K9 1392 aa16.49■□□□□ 0.23
LRMDA-209ENST00000593699 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
LRMDA-209ENST00000593699 ALKQ9UM73 1620 aa16.48■□□□□ 0.23
LRMDA-209ENST00000593699 XIRP1Q702N8 1843 aaKnown RBP16.47■□□□□ 0.23
LRMDA-209ENST00000593699 KCNA6P17658 529 aa16.47■□□□□ 0.23
LRMDA-209ENST00000593699 CLTCL1P53675 1640 aa16.47■□□□□ 0.23
LRMDA-209ENST00000593699 TMEM94Q12767 1356 aa16.46■□□□□ 0.23
LRMDA-209ENST00000593699 KIF1BO60333 1816 aa16.45■□□□□ 0.22
LRMDA-209ENST00000593699 TRIM52Q96A61 297 aa16.45■□□□□ 0.22
LRMDA-209ENST00000593699 CHD2O14647 1828 aaKnown RBP16.44■□□□□ 0.22
LRMDA-209ENST00000593699 PIK3R4Q99570 1358 aa16.43■□□□□ 0.22
LRMDA-209ENST00000593699 PROSER2Q86WR7 435 aaPredicted RBP16.43■□□□□ 0.22
LRMDA-209ENST00000593699 SETBP1Q9Y6X0 1596 aa16.43■□□□□ 0.22
LRMDA-209ENST00000593699 MSH6P52701 1360 aa16.42■□□□□ 0.22
LRMDA-209ENST00000593699 HSPA1LP34931 641 aa16.42■□□□□ 0.22
LRMDA-209ENST00000593699 ZNF326Q5BKZ1 582 aaKnown RBP16.42■□□□□ 0.22
LRMDA-209ENST00000593699 TBX22Q9Y458 520 aa16.41■□□□□ 0.22
LRMDA-209ENST00000593699 ADAMTS13Q76LX8 1427 aa16.41■□□□□ 0.22
LRMDA-209ENST00000593699 SLC4A1APQ9BWU0 796 aaKnown RBP16.4■□□□□ 0.22
LRMDA-209ENST00000593699 SENP3Q9H4L4 574 aaPredicted RBP16.4■□□□□ 0.22
LRMDA-209ENST00000593699 ACIN1Q9UKV3 1341 aaKnown RBP16.4■□□□□ 0.22
LRMDA-209ENST00000593699 NEXMIFQ5QGS0 1516 aa16.4■□□□□ 0.22
LRMDA-209ENST00000593699 MED1Q15648 1581 aaPredicted RBP16.39■□□□□ 0.21
LRMDA-209ENST00000593699 NUTM2DQ5VT03 806 aaPredicted RBP16.39■□□□□ 0.21
LRMDA-209ENST00000593699 NRXN3Q9Y4C0 1643 aa16.37■□□□□ 0.21
LRMDA-209ENST00000593699 NCOA3Q9Y6Q9 1424 aa16.37■□□□□ 0.21
LRMDA-209ENST00000593699 ROBO1Q9Y6N7 1651 aa16.37■□□□□ 0.21
LRMDA-209ENST00000593699 XRN1Q8IZH2 1706 aaKnown RBP16.36■□□□□ 0.21
LRMDA-209ENST00000593699 FAM135BQ49AJ0 1406 aa16.36■□□□□ 0.21
LRMDA-209ENST00000593699 C14orf37Q86TY3 774 aa16.35■□□□□ 0.21
LRMDA-209ENST00000593699 CCDC144AA2RUR9 1427 aa16.34■□□□□ 0.21
LRMDA-209ENST00000593699 PPLO60437 1756 aa16.31■□□□□ 0.2
LRMDA-209ENST00000593699 RBM33Q96EV2 1170 aaKnown RBP16.31■□□□□ 0.2
LRMDA-209ENST00000593699 DCCP43146 1447 aa16.3■□□□□ 0.2
LRMDA-209ENST00000593699 SETD5Q9C0A6 1442 aa16.3■□□□□ 0.2
LRMDA-209ENST00000593699 RPGRIP1LQ68CZ1 1315 aa16.3■□□□□ 0.2
LRMDA-209ENST00000593699 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.3■□□□□ 0.2
LRMDA-209ENST00000593699 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
LRMDA-209ENST00000593699 AMOTL2Q9Y2J4 779 aa16.29■□□□□ 0.2
LRMDA-209ENST00000593699 PTPRUQ92729 1446 aa16.28■□□□□ 0.2
LRMDA-209ENST00000593699 PHF23Q9BUL5 403 aaPredicted RBP16.28■□□□□ 0.2
LRMDA-209ENST00000593699 PHLPP1O60346 1717 aa16.28■□□□□ 0.2
LRMDA-209ENST00000593699 ATF3P18847 181 aa16.27■□□□□ 0.2
LRMDA-209ENST00000593699 CADPS2Q86UW7 1296 aa16.27■□□□□ 0.2
LRMDA-209ENST00000593699 SETD1AO15047 1707 aaKnown RBP16.26■□□□□ 0.19
LRMDA-209ENST00000593699 MPHOSPH9Q99550 1183 aa16.26■□□□□ 0.19
LRMDA-209ENST00000593699 C19orf44Q9H6X5 657 aa16.26■□□□□ 0.19
LRMDA-209ENST00000593699 SLAIN2Q9P270 581 aa16.26■□□□□ 0.19
LRMDA-209ENST00000593699 METP08581 1390 aa16.26■□□□□ 0.19
LRMDA-209ENST00000593699 PTCH1Q13635 1447 aa16.25■□□□□ 0.19
LRMDA-209ENST00000593699 IFT172Q9UG01 1749 aa16.25■□□□□ 0.19
LRMDA-209ENST00000593699 ADGRL3Q9HAR2 1447 aa16.24■□□□□ 0.19
LRMDA-209ENST00000593699 RAB3GAP2Q9H2M9 1393 aa16.24■□□□□ 0.19
LRMDA-209ENST00000593699 NALCNQ8IZF0 1738 aa16.23■□□□□ 0.19
LRMDA-209ENST00000593699 FOXD1Q16676 465 aa16.23■□□□□ 0.19
LRMDA-209ENST00000593699 ANKRD30BQ9BXX2 1392 aa16.23■□□□□ 0.19
LRMDA-209ENST00000593699 AHDC1Q5TGY3 1603 aaPredicted RBP16.23■□□□□ 0.19
LRMDA-209ENST00000593699 PRAG1Q86YV5 1406 aa16.22■□□□□ 0.19
LRMDA-209ENST00000593699 ILDR2Q71H61 639 aa16.22■□□□□ 0.19
LRMDA-209ENST00000593699 SPATA31E1Q6ZUB1 1445 aa16.21■□□□□ 0.19
LRMDA-209ENST00000593699 COL16A1Q07092 1604 aaPredicted RBP16.21■□□□□ 0.19
LRMDA-209ENST00000593699 JCADQ9P266 1359 aa16.19■□□□□ 0.18
LRMDA-209ENST00000593699 LAMC1P11047 1609 aa16.19■□□□□ 0.18
LRMDA-209ENST00000593699 ASXL1Q8IXJ9 1541 aa16.19■□□□□ 0.18
LRMDA-209ENST00000593699 SOCS7O14512 581 aa16.18■□□□□ 0.18
LRMDA-209ENST00000593699 MST1RQ04912 1400 aa16.17■□□□□ 0.18
LRMDA-209ENST00000593699 SHPRHQ149N8 1683 aa16.16■□□□□ 0.18
LRMDA-209ENST00000593699 RGL3Q3MIN7 710 aa16.16■□□□□ 0.18
LRMDA-209ENST00000593699 KNDC1Q76NI1 1749 aa16.16■□□□□ 0.18
LRMDA-209ENST00000593699 MYOM2P54296 1465 aa16.16■□□□□ 0.18
LRMDA-209ENST00000593699 PIK3C2GO75747 1445 aa16.15■□□□□ 0.18
LRMDA-209ENST00000593699 NHSL1Q5SYE7 1610 aa16.15■□□□□ 0.18
LRMDA-209ENST00000593699 CDC42BPGQ6DT37 1551 aa16.14■□□□□ 0.17
LRMDA-209ENST00000593699 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
LRMDA-209ENST00000593699 BRINP3Q76B58 766 aa16.13■□□□□ 0.17
LRMDA-209ENST00000593699 ADGRF5Q8IZF2 1346 aa16.13■□□□□ 0.17
LRMDA-209ENST00000593699 SPATA31A6Q5VVP1 1343 aa16.12■□□□□ 0.17
LRMDA-209ENST00000593699 TECPR2O15040 1411 aa16.11■□□□□ 0.17
LRMDA-209ENST00000593699 LRPPRCP42704 1394 aaKnown RBP16.11■□□□□ 0.17
LRMDA-209ENST00000593699 C1orf167Q5SNV9 1468 aa16.1■□□□□ 0.17
LRMDA-209ENST00000593699 NRXN1Q9ULB1 1477 aa16.1■□□□□ 0.17
LRMDA-209ENST00000593699 HRCP23327 699 aa16.09■□□□□ 0.17
LRMDA-209ENST00000593699 MEX3CQ5U5Q3 659 aaKnown RBP16.07■□□□□ 0.16
LRMDA-209ENST00000593699 YTHDC2Q9H6S0 1430 aaKnown RBP16.07■□□□□ 0.16
LRMDA-209ENST00000593699 ABCC11Q96J66 1382 aa16.06■□□□□ 0.16
LRMDA-209ENST00000593699 STK26Q9P289 416 aa16.05■□□□□ 0.16
LRMDA-209ENST00000593699 LRP6O75581 1613 aa16.05■□□□□ 0.16
LRMDA-209ENST00000593699 DHX57Q6P158 1386 aaKnown RBP16.04■□□□□ 0.16
LRMDA-209ENST00000593699 LRRC59Q96AG4 307 aaKnown RBP16.03■□□□□ 0.16
LRMDA-209ENST00000593699 FMN2Q9NZ56 1722 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms