RNA–Protein interactions for RNA: ENST00000593678.5

GTF2F1-202, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 2

Gene GTF2F1, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-202ENST00000593678 VGFO15240 615 aaPredicted RBP20.82■□□□□ 0.92
GTF2F1-202ENST00000593678 ADGRF5Q8IZF2 1346 aa20.81■□□□□ 0.92
GTF2F1-202ENST00000593678 FER1L4A9Z1Z3 1794 aa20.81■□□□□ 0.92
GTF2F1-202ENST00000593678 TMEM131LA2VDJ0 1609 aa20.8■□□□□ 0.92
GTF2F1-202ENST00000593678 NRXN1Q9ULB1 1477 aa20.79■□□□□ 0.92
GTF2F1-202ENST00000593678 WASHC2AQ641Q2 1341 aa20.79■□□□□ 0.92
GTF2F1-202ENST00000593678 ST20-MTHFSA0A0A6YYL1 179 aa20.78■□□□□ 0.92
GTF2F1-202ENST00000593678 POLR1AO95602 1720 aaPredicted RBP20.78■□□□□ 0.92
GTF2F1-202ENST00000593678 TNRQ92752 1358 aa20.78■□□□□ 0.92
GTF2F1-202ENST00000593678 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
GTF2F1-202ENST00000593678 MYO5BQ9ULV0 1848 aa20.77■□□□□ 0.92
GTF2F1-202ENST00000593678 CCDC7Q96M83 1385 aa20.77■□□□□ 0.91
GTF2F1-202ENST00000593678 EIF3AQ14152 1382 aaKnown RBP20.76■□□□□ 0.91
GTF2F1-202ENST00000593678 PIK3C2GO75747 1445 aa20.75■□□□□ 0.91
GTF2F1-202ENST00000593678 CFAP70Q5T0N1 1121 aa20.75■□□□□ 0.91
GTF2F1-202ENST00000593678 MIER1Q8N108 512 aa20.75■□□□□ 0.91
GTF2F1-202ENST00000593678 SCAF11Q99590 1463 aaKnown RBP20.75■□□□□ 0.91
GTF2F1-202ENST00000593678 ZFYVE9O95405 1425 aa20.73■□□□□ 0.91
GTF2F1-202ENST00000593678 KIF7Q2M1P5 1343 aa20.73■□□□□ 0.91
GTF2F1-202ENST00000593678 NUTM2DQ5VT03 806 aaPredicted RBP20.73■□□□□ 0.91
GTF2F1-202ENST00000593678 A2ML1A8K2U0 1454 aa20.71■□□□□ 0.91
GTF2F1-202ENST00000593678 C11orf95C9JLR9 678 aaPredicted RBP20.71■□□□□ 0.91
GTF2F1-202ENST00000593678 POLR3GLQ9BT43 218 aa20.71■□□□□ 0.91
GTF2F1-202ENST00000593678 C3P01024 1663 aa20.71■□□□□ 0.91
GTF2F1-202ENST00000593678 IQGAP1P46940 1657 aa20.71■□□□□ 0.91
GTF2F1-202ENST00000593678 C14orf93Q9H972 538 aaKnown RBP20.7■□□□□ 0.9
GTF2F1-202ENST00000593678 SETBP1Q9Y6X0 1596 aa20.7■□□□□ 0.9
GTF2F1-202ENST00000593678 HDGFP51858 240 aaKnown RBP20.7■□□□□ 0.9
GTF2F1-202ENST00000593678 PLPPR3Q6T4P5 718 aa20.7■□□□□ 0.9
GTF2F1-202ENST00000593678 CEBPAP49715 358 aaPredicted RBP20.69■□□□□ 0.9
GTF2F1-202ENST00000593678 NLRP1Q9C000 1473 aa20.69■□□□□ 0.9
GTF2F1-202ENST00000593678 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.68■□□□□ 0.9
GTF2F1-202ENST00000593678 KDM5AP29375 1690 aaKnown RBP20.68■□□□□ 0.9
GTF2F1-202ENST00000593678 ANP32CO43423 234 aa20.67■□□□□ 0.9
GTF2F1-202ENST00000593678 RIMS2Q9UQ26 1411 aa20.67■□□□□ 0.9
GTF2F1-202ENST00000593678 SLC24A1O60721 1099 aa20.67■□□□□ 0.9
GTF2F1-202ENST00000593678 TMF1P82094 1093 aa20.67■□□□□ 0.9
GTF2F1-202ENST00000593678 RIMS1Q86UR5 1692 aaKnown RBP20.64■□□□□ 0.9
GTF2F1-202ENST00000593678 CDCA8Q53HL2 280 aa20.62■□□□□ 0.89
GTF2F1-202ENST00000593678 UBR1Q8IWV7 1749 aa20.62■□□□□ 0.89
GTF2F1-202ENST00000593678 TESK2Q96S53 571 aa20.61■□□□□ 0.89
GTF2F1-202ENST00000593678 ADGRB1O14514 1584 aa20.61■□□□□ 0.89
GTF2F1-202ENST00000593678 ADAMTSL3P82987 1691 aa20.6■□□□□ 0.89
GTF2F1-202ENST00000593678 TMEM132EQ6IEE7 984 aa20.59■□□□□ 0.89
GTF2F1-202ENST00000593678 TMEM2Q9UHN6 1383 aa20.59■□□□□ 0.89
GTF2F1-202ENST00000593678 TRAK1Q9UPV9 953 aa20.58■□□□□ 0.89
GTF2F1-202ENST00000593678 SENP3Q9H4L4 574 aaPredicted RBP20.58■□□□□ 0.88
GTF2F1-202ENST00000593678 CENPJQ9HC77 1338 aaPredicted RBP20.58■□□□□ 0.88
GTF2F1-202ENST00000593678 BCANQ96GW7 911 aa20.56■□□□□ 0.88
GTF2F1-202ENST00000593678 DISP3Q9P2K9 1392 aa20.56■□□□□ 0.88
GTF2F1-202ENST00000593678 MYO3AQ8NEV4 1616 aa20.56■□□□□ 0.88
GTF2F1-202ENST00000593678 EID1Q9Y6B2 187 aa20.56■□□□□ 0.88
GTF2F1-202ENST00000593678 ALKQ9UM73 1620 aa20.55■□□□□ 0.88
GTF2F1-202ENST00000593678 THEMISQ8N1K5 641 aaPredicted RBP20.55■□□□□ 0.88
GTF2F1-202ENST00000593678 SBNO2Q9Y2G9 1366 aa20.53■□□□□ 0.88
GTF2F1-202ENST00000593678 STK26Q9P289 416 aa20.51■□□□□ 0.87
GTF2F1-202ENST00000593678 QRICH2Q9H0J4 1663 aa20.5■□□□□ 0.87
GTF2F1-202ENST00000593678 YTHDC2Q9H6S0 1430 aaKnown RBP20.5■□□□□ 0.87
GTF2F1-202ENST00000593678 TXNDC2Q86VQ3 553 aa20.5■□□□□ 0.87
GTF2F1-202ENST00000593678 CEP170BQ9Y4F5 1589 aaPredicted RBP20.49■□□□□ 0.87
GTF2F1-202ENST00000593678 ARHGEF28Q8N1W1 1705 aaKnown RBP20.49■□□□□ 0.87
GTF2F1-202ENST00000593678 ASXL1Q8IXJ9 1541 aa20.49■□□□□ 0.87
GTF2F1-202ENST00000593678 CCER2I3L3R5 266 aa20.48■□□□□ 0.87
GTF2F1-202ENST00000593678 SLIT1O75093 1534 aa20.48■□□□□ 0.87
GTF2F1-202ENST00000593678 POGKQ9P215 609 aa20.47■□□□□ 0.87
GTF2F1-202ENST00000593678 SETD1BQ9UPS6 1966 aaKnown RBP20.47■□□□□ 0.87
GTF2F1-202ENST00000593678 PLEKHG1Q9ULL1 1385 aa20.47■□□□□ 0.87
GTF2F1-202ENST00000593678 ARHGAP23Q9P227 1491 aa20.45■□□□□ 0.86
GTF2F1-202ENST00000593678 NRXN3Q9Y4C0 1643 aa20.45■□□□□ 0.86
GTF2F1-202ENST00000593678 LRPPRCP42704 1394 aaKnown RBP20.44■□□□□ 0.86
GTF2F1-202ENST00000593678 EVC2Q86UK5 1308 aa20.43■□□□□ 0.86
GTF2F1-202ENST00000593678 PTPRMP28827 1452 aa20.43■□□□□ 0.86
GTF2F1-202ENST00000593678 SETD1AO15047 1707 aaKnown RBP20.43■□□□□ 0.86
GTF2F1-202ENST00000593678 LTKP29376 864 aa20.43■□□□□ 0.86
GTF2F1-202ENST00000593678 ZNF142P52746 1687 aaPredicted RBP20.43■□□□□ 0.86
GTF2F1-202ENST00000593678 YTHDC1Q96MU7 727 aaKnown RBP20.42■□□□□ 0.86
GTF2F1-202ENST00000593678 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
GTF2F1-202ENST00000593678 SAFB2Q14151 953 aaKnown RBP eCLIP20.41■□□□□ 0.86
GTF2F1-202ENST00000593678 PRAM1Q96QH2 718 aa20.41■□□□□ 0.86
GTF2F1-202ENST00000593678 DLC1Q96QB1 1528 aa20.41■□□□□ 0.86
GTF2F1-202ENST00000593678 PANK3Q9H999 370 aa20.4■□□□□ 0.86
GTF2F1-202ENST00000593678 METP08581 1390 aa20.39■□□□□ 0.85
GTF2F1-202ENST00000593678 ABCC11Q96J66 1382 aa20.39■□□□□ 0.85
GTF2F1-202ENST00000593678 CNGB1Q14028 1251 aaPredicted RBP20.38■□□□□ 0.85
GTF2F1-202ENST00000593678 ANKLE2Q86XL3 938 aa20.37■□□□□ 0.85
GTF2F1-202ENST00000593678 KTN1Q86UP2 1357 aaKnown RBP20.37■□□□□ 0.85
GTF2F1-202ENST00000593678 ADAMTS13Q76LX8 1427 aa20.37■□□□□ 0.85
GTF2F1-202ENST00000593678 PUS7Q96PZ0 661 aaKnown RBP20.36■□□□□ 0.85
GTF2F1-202ENST00000593678 CENPBP07199 599 aaPredicted RBP20.36■□□□□ 0.85
GTF2F1-202ENST00000593678 DIP2AQ14689 1571 aa20.36■□□□□ 0.85
GTF2F1-202ENST00000593678 KNSTRNQ9Y448 316 aa20.36■□□□□ 0.85
GTF2F1-202ENST00000593678 KNDC1Q76NI1 1749 aa20.35■□□□□ 0.85
GTF2F1-202ENST00000593678 MINK1Q8N4C8 1332 aaPredicted RBP20.35■□□□□ 0.85
GTF2F1-202ENST00000593678 TMC1Q8TDI8 760 aa20.34■□□□□ 0.85
GTF2F1-202ENST00000593678 SLC26A8Q96RN1 970 aa20.34■□□□□ 0.85
GTF2F1-202ENST00000593678 MYOM1P52179 1685 aa20.34■□□□□ 0.85
GTF2F1-202ENST00000593678 SRPK2P78362 688 aaKnown RBP20.33■□□□□ 0.85
GTF2F1-202ENST00000593678 RALBP1Q15311 655 aa20.33■□□□□ 0.85
GTF2F1-202ENST00000593678 TBX22Q9Y458 520 aa20.33■□□□□ 0.85
GTF2F1-202ENST00000593678 SIRT1Q96EB6 747 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms