RNA–Protein interactions for RNA: ENST00000593128.5

CIRBP-243, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-243ENST00000593128 PPP1R15AO75807 674 aaPredicted RBP27.4■■□□□ 1.98
CIRBP-243ENST00000593128 IQGAP3Q86VI3 1631 aa27.38■■□□□ 1.97
CIRBP-243ENST00000593128 NUP155O75694 1391 aa27.36■■□□□ 1.97
CIRBP-243ENST00000593128 MED1Q15648 1581 aaPredicted RBP27.36■■□□□ 1.97
CIRBP-243ENST00000593128 RBM33Q96EV2 1170 aaKnown RBP27.36■■□□□ 1.97
CIRBP-243ENST00000593128 TMEM131LA2VDJ0 1609 aa27.35■■□□□ 1.97
CIRBP-243ENST00000593128 RIMS2Q9UQ26 1411 aa27.34■■□□□ 1.97
CIRBP-243ENST00000593128 SOCS7O14512 581 aa27.34■■□□□ 1.97
CIRBP-243ENST00000593128 KCNA6P17658 529 aa27.34■■□□□ 1.97
CIRBP-243ENST00000593128 PROSER2Q86WR7 435 aaPredicted RBP27.34■■□□□ 1.97
CIRBP-243ENST00000593128 TMEM94Q12767 1356 aa27.33■■□□□ 1.97
CIRBP-243ENST00000593128 NUTM2DQ5VT03 806 aaPredicted RBP27.32■■□□□ 1.96
CIRBP-243ENST00000593128 HDGFP51858 240 aaKnown RBP27.31■■□□□ 1.96
CIRBP-243ENST00000593128 ZFYVE9O95405 1425 aa27.3■■□□□ 1.96
CIRBP-243ENST00000593128 PLEKHG1Q9ULL1 1385 aa27.27■■□□□ 1.96
CIRBP-243ENST00000593128 PHF23Q9BUL5 403 aaPredicted RBP27.27■■□□□ 1.96
CIRBP-243ENST00000593128 NWD1Q149M9 1564 aa27.25■■□□□ 1.95
CIRBP-243ENST00000593128 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.24■■□□□ 1.95
CIRBP-243ENST00000593128 NKTRP30414 1462 aaKnown RBP27.23■■□□□ 1.95
CIRBP-243ENST00000593128 CHD2O14647 1828 aaKnown RBP27.21■■□□□ 1.95
CIRBP-243ENST00000593128 SPHKAPQ2M3C7 1700 aa27.2■■□□□ 1.94
CIRBP-243ENST00000593128 MSH6P52701 1360 aa27.19■■□□□ 1.94
CIRBP-243ENST00000593128 RRBP1Q9P2E9 1410 aaKnown RBP27.18■■□□□ 1.94
CIRBP-243ENST00000593128 ROBO1Q9Y6N7 1651 aa27.17■■□□□ 1.94
CIRBP-243ENST00000593128 C14orf37Q86TY3 774 aa27.17■■□□□ 1.94
CIRBP-243ENST00000593128 ZNF326Q5BKZ1 582 aaKnown RBP27.15■■□□□ 1.94
CIRBP-243ENST00000593128 TBX22Q9Y458 520 aa27.15■■□□□ 1.94
CIRBP-243ENST00000593128 FAM135BQ49AJ0 1406 aa27.15■■□□□ 1.94
CIRBP-243ENST00000593128 ADAMTS13Q76LX8 1427 aa27.12■■□□□ 1.93
CIRBP-243ENST00000593128 DIP2AQ14689 1571 aa27.11■■□□□ 1.93
CIRBP-243ENST00000593128 TRIM52Q96A61 297 aa27.11■■□□□ 1.93
CIRBP-243ENST00000593128 NAIPQ13075 1403 aa27.1■■□□□ 1.93
CIRBP-243ENST00000593128 TRPM2O94759 1503 aa27.08■■□□□ 1.93
CIRBP-243ENST00000593128 SLAIN2Q9P270 581 aa27.08■■□□□ 1.93
CIRBP-243ENST00000593128 CLTCL1P53675 1640 aa27.06■■□□□ 1.92
CIRBP-243ENST00000593128 PHLPP1O60346 1717 aa27.04■■□□□ 1.92
CIRBP-243ENST00000593128 AMOTL2Q9Y2J4 779 aa27.04■■□□□ 1.92
CIRBP-243ENST00000593128 KIF1BO60333 1816 aa27.02■■□□□ 1.92
CIRBP-243ENST00000593128 PIK3R4Q99570 1358 aa27.02■■□□□ 1.92
CIRBP-243ENST00000593128 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.01■■□□□ 1.91
CIRBP-243ENST00000593128 NRXN3Q9Y4C0 1643 aa27.01■■□□□ 1.91
CIRBP-243ENST00000593128 ATF3P18847 181 aa27■■□□□ 1.91
CIRBP-243ENST00000593128 PTPRUQ92729 1446 aa26.99■■□□□ 1.91
CIRBP-243ENST00000593128 HFM1A2PYH4 1435 aa26.99■■□□□ 1.91
CIRBP-243ENST00000593128 NCOA3Q9Y6Q9 1424 aa26.98■■□□□ 1.91
CIRBP-243ENST00000593128 SETBP1Q9Y6X0 1596 aa26.97■■□□□ 1.91
CIRBP-243ENST00000593128 SLC4A1APQ9BWU0 796 aaKnown RBP26.97■■□□□ 1.91
CIRBP-243ENST00000593128 CADPS2Q86UW7 1296 aa26.96■■□□□ 1.91
CIRBP-243ENST00000593128 C19orf44Q9H6X5 657 aa26.96■■□□□ 1.91
CIRBP-243ENST00000593128 NEXMIFQ5QGS0 1516 aa26.95■■□□□ 1.91
CIRBP-243ENST00000593128 METP08581 1390 aa26.93■■□□□ 1.9
CIRBP-243ENST00000593128 XRN1Q8IZH2 1706 aaKnown RBP26.93■■□□□ 1.9
CIRBP-243ENST00000593128 RGS17Q9UGC6 210 aaPredicted RBP26.92■■□□□ 1.9
CIRBP-243ENST00000593128 JCADQ9P266 1359 aa26.89■■□□□ 1.9
CIRBP-243ENST00000593128 COL16A1Q07092 1604 aaPredicted RBP26.88■■□□□ 1.89
CIRBP-243ENST00000593128 FOXD1Q16676 465 aa26.88■■□□□ 1.89
CIRBP-243ENST00000593128 VGFO15240 615 aaPredicted RBP26.83■■□□□ 1.89
CIRBP-243ENST00000593128 AHDC1Q5TGY3 1603 aaPredicted RBP26.81■■□□□ 1.88
CIRBP-243ENST00000593128 MEX3CQ5U5Q3 659 aaKnown RBP26.81■■□□□ 1.88
CIRBP-243ENST00000593128 POTEAQ6S8J7 498 aa26.81■■□□□ 1.88
CIRBP-243ENST00000593128 BRINP3Q76B58 766 aa26.81■■□□□ 1.88
CIRBP-243ENST00000593128 DCCP43146 1447 aa26.8■■□□□ 1.88
CIRBP-243ENST00000593128 NALCNQ8IZF0 1738 aa26.79■■□□□ 1.88
CIRBP-243ENST00000593128 PPLO60437 1756 aa26.79■■□□□ 1.88
CIRBP-243ENST00000593128 ASXL1Q8IXJ9 1541 aa26.77■■□□□ 1.88
CIRBP-243ENST00000593128 MST1RQ04912 1400 aa26.76■■□□□ 1.87
CIRBP-243ENST00000593128 ADGRL3Q9HAR2 1447 aa26.76■■□□□ 1.87
CIRBP-243ENST00000593128 RPGRIP1LQ68CZ1 1315 aa26.76■■□□□ 1.87
CIRBP-243ENST00000593128 SETD1AO15047 1707 aaKnown RBP26.76■■□□□ 1.87
CIRBP-243ENST00000593128 CCDC144AA2RUR9 1427 aa26.74■■□□□ 1.87
CIRBP-243ENST00000593128 SPATA31A6Q5VVP1 1343 aa26.74■■□□□ 1.87
CIRBP-243ENST00000593128 SHPRHQ149N8 1683 aa26.74■■□□□ 1.87
CIRBP-243ENST00000593128 NUTM2BA6NNL0 878 aaPredicted RBP26.74■■□□□ 1.87
CIRBP-243ENST00000593128 NUTM2EB1AL46 878 aaPredicted RBP26.74■■□□□ 1.87
CIRBP-243ENST00000593128 RGL3Q3MIN7 710 aa26.74■■□□□ 1.87
CIRBP-243ENST00000593128 NUTM2AQ8IVF1 878 aaPredicted RBP26.74■■□□□ 1.87
CIRBP-243ENST00000593128 MPHOSPH9Q99550 1183 aa26.74■■□□□ 1.87
CIRBP-243ENST00000593128 LRP6O75581 1613 aa26.74■■□□□ 1.87
CIRBP-243ENST00000593128 ROBO2Q9HCK4 1378 aa26.71■■□□□ 1.87
CIRBP-243ENST00000593128 DDX17Q92841 729 aaKnown RBP26.7■■□□□ 1.86
CIRBP-243ENST00000593128 NHSL1Q5SYE7 1610 aa26.69■■□□□ 1.86
CIRBP-243ENST00000593128 PTCH1Q13635 1447 aa26.68■■□□□ 1.86
CIRBP-243ENST00000593128 ADGRF5Q8IZF2 1346 aa26.66■■□□□ 1.86
CIRBP-243ENST00000593128 STK26Q9P289 416 aa26.64■■□□□ 1.86
CIRBP-243ENST00000593128 C1orf167Q5SNV9 1468 aa26.63■■□□□ 1.85
CIRBP-243ENST00000593128 IFT172Q9UG01 1749 aa26.62■■□□□ 1.85
CIRBP-243ENST00000593128 LRRC59Q96AG4 307 aaKnown RBP26.62■■□□□ 1.85
CIRBP-243ENST00000593128 SETD5Q9C0A6 1442 aa26.62■■□□□ 1.85
CIRBP-243ENST00000593128 SPATA31E1Q6ZUB1 1445 aa26.6■■□□□ 1.85
CIRBP-243ENST00000593128 ZNF772Q68DY9 489 aaPredicted RBP26.6■■□□□ 1.85
CIRBP-243ENST00000593128 ORAI2Q96SN7 254 aa26.59■■□□□ 1.85
CIRBP-243ENST00000593128 ANKRD30BQ9BXX2 1392 aa26.58■■□□□ 1.84
CIRBP-243ENST00000593128 TMEM132EQ6IEE7 984 aa26.56■■□□□ 1.84
CIRBP-243ENST00000593128 PRAG1Q86YV5 1406 aa26.55■■□□□ 1.84
CIRBP-243ENST00000593128 WAPLQ7Z5K2 1190 aa26.54■■□□□ 1.84
CIRBP-243ENST00000593128 C8orf37Q96NL8 207 aa26.54■■□□□ 1.84
CIRBP-243ENST00000593128 PNPLA6Q8IY17 1366 aa26.54■■□□□ 1.84
CIRBP-243ENST00000593128 NUTM2FA1L443 756 aa26.53■■□□□ 1.84
CIRBP-243ENST00000593128 AFF2P51816 1311 aa26.53■■□□□ 1.84
CIRBP-243ENST00000593128 RAB3GAP2Q9H2M9 1393 aa26.53■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms