RNA–Protein interactions for RNA: ENST00000592960.1

PKN1-215, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-215ENST00000592960 NWD1Q149M9 1564 aa23.01■■□□□ 1.27
PKN1-215ENST00000592960 MSH6P52701 1360 aa23.01■■□□□ 1.27
PKN1-215ENST00000592960 ADGRL2O95490 1459 aa23■■□□□ 1.27
PKN1-215ENST00000592960 RPRD2Q5VT52 1461 aaKnown RBP23■■□□□ 1.27
PKN1-215ENST00000592960 HDGFP51858 240 aaKnown RBP23■■□□□ 1.27
PKN1-215ENST00000592960 PLEKHG1Q9ULL1 1385 aa22.99■■□□□ 1.27
PKN1-215ENST00000592960 ZFYVE9O95405 1425 aa22.99■■□□□ 1.27
PKN1-215ENST00000592960 PPARGC1BQ86YN6 1023 aaKnown RBP22.98■■□□□ 1.27
PKN1-215ENST00000592960 BCANQ96GW7 911 aa22.98■■□□□ 1.27
PKN1-215ENST00000592960 TBX22Q9Y458 520 aa22.97■■□□□ 1.27
PKN1-215ENST00000592960 ANKRD50Q9ULJ7 1429 aa22.95■■□□□ 1.26
PKN1-215ENST00000592960 NCOA3Q9Y6Q9 1424 aa22.95■■□□□ 1.26
PKN1-215ENST00000592960 JCADQ9P266 1359 aa22.94■■□□□ 1.26
PKN1-215ENST00000592960 RIMS2Q9UQ26 1411 aa22.93■■□□□ 1.26
PKN1-215ENST00000592960 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
PKN1-215ENST00000592960 CHD2O14647 1828 aaKnown RBP22.92■■□□□ 1.26
PKN1-215ENST00000592960 PPP1R15AO75807 674 aaPredicted RBP22.9■■□□□ 1.26
PKN1-215ENST00000592960 FAM50AQ14320 339 aaKnown RBP22.88■■□□□ 1.25
PKN1-215ENST00000592960 TMEM131LA2VDJ0 1609 aa22.88■■□□□ 1.25
PKN1-215ENST00000592960 C19orf44Q9H6X5 657 aa22.87■■□□□ 1.25
PKN1-215ENST00000592960 PIK3R4Q99570 1358 aa22.87■■□□□ 1.25
PKN1-215ENST00000592960 PHLPP1O60346 1717 aa22.86■■□□□ 1.25
PKN1-215ENST00000592960 CADPS2Q86UW7 1296 aa22.85■■□□□ 1.25
PKN1-215ENST00000592960 SPATA31A6Q5VVP1 1343 aa22.84■■□□□ 1.25
PKN1-215ENST00000592960 ADAMTS13Q76LX8 1427 aa22.84■■□□□ 1.25
PKN1-215ENST00000592960 MYO5BQ9ULV0 1848 aa22.84■■□□□ 1.25
PKN1-215ENST00000592960 COL16A1Q07092 1604 aaPredicted RBP22.82■■□□□ 1.24
PKN1-215ENST00000592960 GCC2Q8IWJ2 1684 aa22.81■■□□□ 1.24
PKN1-215ENST00000592960 CHGAP10645 457 aaKnown RBP22.8■■□□□ 1.24
PKN1-215ENST00000592960 ATF3P18847 181 aa22.8■■□□□ 1.24
PKN1-215ENST00000592960 C14orf37Q86TY3 774 aa22.8■■□□□ 1.24
PKN1-215ENST00000592960 ZNF772Q68DY9 489 aaPredicted RBP22.79■■□□□ 1.24
PKN1-215ENST00000592960 NUTM2DQ5VT03 806 aaPredicted RBP22.78■■□□□ 1.24
PKN1-215ENST00000592960 UNC13BO14795 1591 aa22.77■■□□□ 1.24
PKN1-215ENST00000592960 DIP2AQ14689 1571 aa22.77■■□□□ 1.24
PKN1-215ENST00000592960 ROCK1Q13464 1354 aa22.76■■□□□ 1.23
PKN1-215ENST00000592960 LRP6O75581 1613 aa22.76■■□□□ 1.23
PKN1-215ENST00000592960 AHDC1Q5TGY3 1603 aaPredicted RBP22.76■■□□□ 1.23
PKN1-215ENST00000592960 AMOTL2Q9Y2J4 779 aa22.76■■□□□ 1.23
PKN1-215ENST00000592960 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.75■■□□□ 1.23
PKN1-215ENST00000592960 TRIM26Q12899 539 aaPredicted RBP22.75■■□□□ 1.23
PKN1-215ENST00000592960 MEX3CQ5U5Q3 659 aaKnown RBP22.74■■□□□ 1.23
PKN1-215ENST00000592960 BRINP3Q76B58 766 aa22.74■■□□□ 1.23
PKN1-215ENST00000592960 E9PCH4 1651 aa22.74■■□□□ 1.23
PKN1-215ENST00000592960 PTPRUQ92729 1446 aa22.73■■□□□ 1.23
PKN1-215ENST00000592960 UPF1Q92900 1129 aaKnown RBP eCLIP22.72■■□□□ 1.23
PKN1-215ENST00000592960 SETD1AO15047 1707 aaKnown RBP22.71■■□□□ 1.23
PKN1-215ENST00000592960 NUP155O75694 1391 aa22.7■■□□□ 1.22
PKN1-215ENST00000592960 DCCP43146 1447 aa22.7■■□□□ 1.22
PKN1-215ENST00000592960 TRPM2O94759 1503 aa22.7■■□□□ 1.22
PKN1-215ENST00000592960 SHPRHQ149N8 1683 aa22.69■■□□□ 1.22
PKN1-215ENST00000592960 IQGAP3Q86VI3 1631 aa22.69■■□□□ 1.22
PKN1-215ENST00000592960 RXRBP28702 533 aa22.68■■□□□ 1.22
PKN1-215ENST00000592960 RRBP1Q9P2E9 1410 aaKnown RBP22.67■■□□□ 1.22
PKN1-215ENST00000592960 TRIM52Q96A61 297 aa22.66■■□□□ 1.22
PKN1-215ENST00000592960 SETD5Q9C0A6 1442 aa22.65■■□□□ 1.22
PKN1-215ENST00000592960 CDK12Q9NYV4 1490 aaPredicted RBP22.63■■□□□ 1.21
PKN1-215ENST00000592960 LRRC59Q96AG4 307 aaKnown RBP22.63■■□□□ 1.21
PKN1-215ENST00000592960 NUTM2BA6NNL0 878 aaPredicted RBP22.62■■□□□ 1.21
PKN1-215ENST00000592960 NUTM2EB1AL46 878 aaPredicted RBP22.62■■□□□ 1.21
PKN1-215ENST00000592960 NUTM2AQ8IVF1 878 aaPredicted RBP22.62■■□□□ 1.21
PKN1-215ENST00000592960 MST1RQ04912 1400 aa22.62■■□□□ 1.21
PKN1-215ENST00000592960 SETBP1Q9Y6X0 1596 aa22.62■■□□□ 1.21
PKN1-215ENST00000592960 PCGF6Q9BYE7 350 aa22.61■■□□□ 1.21
PKN1-215ENST00000592960 ASXL1Q8IXJ9 1541 aa22.61■■□□□ 1.21
PKN1-215ENST00000592960 SRCAPQ6ZRS2 3230 aa22.6■■□□□ 1.21
PKN1-215ENST00000592960 METP08581 1390 aa22.6■■□□□ 1.21
PKN1-215ENST00000592960 NRXN3Q9Y4C0 1643 aa22.6■■□□□ 1.21
PKN1-215ENST00000592960 XRN1Q8IZH2 1706 aaKnown RBP22.6■■□□□ 1.21
PKN1-215ENST00000592960 AFF2P51816 1311 aa22.59■■□□□ 1.21
PKN1-215ENST00000592960 ZNF326Q5BKZ1 582 aaKnown RBP22.57■■□□□ 1.2
PKN1-215ENST00000592960 ADGRL3Q9HAR2 1447 aa22.54■■□□□ 1.2
PKN1-215ENST00000592960 NHSL1Q5SYE7 1610 aa22.53■■□□□ 1.2
PKN1-215ENST00000592960 ITGAEP38570 1179 aa22.53■■□□□ 1.2
PKN1-215ENST00000592960 RBM6P78332 1123 aaKnown RBP22.53■■□□□ 1.2
PKN1-215ENST00000592960 QTRT2Q9H974 415 aaKnown RBP22.53■■□□□ 1.2
PKN1-215ENST00000592960 PNPLA6Q8IY17 1366 aa22.52■■□□□ 1.2
PKN1-215ENST00000592960 DDX17Q92841 729 aaKnown RBP22.52■■□□□ 1.2
PKN1-215ENST00000592960 C8orf37Q96NL8 207 aa22.5■■□□□ 1.19
PKN1-215ENST00000592960 SPHKAPQ2M3C7 1700 aa22.5■■□□□ 1.19
PKN1-215ENST00000592960 C1orf167Q5SNV9 1468 aa22.47■■□□□ 1.19
PKN1-215ENST00000592960 NEXMIFQ5QGS0 1516 aa22.47■■□□□ 1.19
PKN1-215ENST00000592960 NGLY1Q96IV0 654 aa22.45■■□□□ 1.18
PKN1-215ENST00000592960 SOS2Q07890 1332 aaPredicted RBP22.45■■□□□ 1.18
PKN1-215ENST00000592960 RGS12O14924 1447 aa22.45■■□□□ 1.18
PKN1-215ENST00000592960 NAIPQ13075 1403 aa22.45■■□□□ 1.18
PKN1-215ENST00000592960 VGFO15240 615 aaPredicted RBP22.44■■□□□ 1.18
PKN1-215ENST00000592960 PTCH1Q13635 1447 aa22.43■■□□□ 1.18
PKN1-215ENST00000592960 LAMC1P11047 1609 aa22.42■■□□□ 1.18
PKN1-215ENST00000592960 ORAI2Q96SN7 254 aa22.42■■□□□ 1.18
PKN1-215ENST00000592960 CLTCL1P53675 1640 aa22.42■■□□□ 1.18
PKN1-215ENST00000592960 PRAG1Q86YV5 1406 aa22.41■■□□□ 1.18
PKN1-215ENST00000592960 NALCNQ8IZF0 1738 aa22.41■■□□□ 1.18
PKN1-215ENST00000592960 ADAMTS2O95450 1211 aa22.41■■□□□ 1.18
PKN1-215ENST00000592960 HFM1A2PYH4 1435 aa22.4■■□□□ 1.18
PKN1-215ENST00000592960 ROBO2Q9HCK4 1378 aa22.4■■□□□ 1.18
PKN1-215ENST00000592960 FNBP4Q8N3X1 1017 aaPredicted RBP22.4■■□□□ 1.18
PKN1-215ENST00000592960 RPGRIP1LQ68CZ1 1315 aa22.39■■□□□ 1.18
PKN1-215ENST00000592960 USP21Q9UK80 565 aa22.37■■□□□ 1.17
PKN1-215ENST00000592960 TRPC5Q9UL62 973 aaPredicted RBP22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms