RNA–Protein interactions for RNA: ENST00000592815.5

CIRBP-240, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-240ENST00000592815 PROSER2Q86WR7 435 aaPredicted RBP24.44■■□□□ 1.5
CIRBP-240ENST00000592815 RIMS2Q9UQ26 1411 aa24.44■■□□□ 1.5
CIRBP-240ENST00000592815 GCC2Q8IWJ2 1684 aa24.43■■□□□ 1.5
CIRBP-240ENST00000592815 RBM33Q96EV2 1170 aaKnown RBP24.42■■□□□ 1.5
CIRBP-240ENST00000592815 ZFYVE9O95405 1425 aa24.42■■□□□ 1.5
CIRBP-240ENST00000592815 TMEM94Q12767 1356 aa24.42■■□□□ 1.5
CIRBP-240ENST00000592815 NUTM2DQ5VT03 806 aaPredicted RBP24.41■■□□□ 1.5
CIRBP-240ENST00000592815 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.41■■□□□ 1.5
CIRBP-240ENST00000592815 IQGAP3Q86VI3 1631 aa24.4■■□□□ 1.5
CIRBP-240ENST00000592815 PLEKHG1Q9ULL1 1385 aa24.4■■□□□ 1.5
CIRBP-240ENST00000592815 E9PCH4 1651 aa24.4■■□□□ 1.5
CIRBP-240ENST00000592815 RRBP1Q9P2E9 1410 aaKnown RBP24.39■■□□□ 1.5
CIRBP-240ENST00000592815 TMEM131LA2VDJ0 1609 aa24.38■■□□□ 1.49
CIRBP-240ENST00000592815 TBX22Q9Y458 520 aa24.35■■□□□ 1.49
CIRBP-240ENST00000592815 SOCS7O14512 581 aa24.34■■□□□ 1.49
CIRBP-240ENST00000592815 MYO5BQ9ULV0 1848 aa24.33■■□□□ 1.49
CIRBP-240ENST00000592815 XIRP1Q702N8 1843 aaKnown RBP24.32■■□□□ 1.48
CIRBP-240ENST00000592815 NAIPQ13075 1403 aa24.3■■□□□ 1.48
CIRBP-240ENST00000592815 NKTRP30414 1462 aaKnown RBP24.28■■□□□ 1.48
CIRBP-240ENST00000592815 TRIM52Q96A61 297 aa24.28■■□□□ 1.48
CIRBP-240ENST00000592815 FAM135BQ49AJ0 1406 aa24.27■■□□□ 1.48
CIRBP-240ENST00000592815 ZNF326Q5BKZ1 582 aaKnown RBP24.27■■□□□ 1.48
CIRBP-240ENST00000592815 NWD1Q149M9 1564 aa24.26■■□□□ 1.47
CIRBP-240ENST00000592815 MSH6P52701 1360 aa24.26■■□□□ 1.47
CIRBP-240ENST00000592815 ADAMTS13Q76LX8 1427 aa24.26■■□□□ 1.47
CIRBP-240ENST00000592815 MED1Q15648 1581 aaPredicted RBP24.25■■□□□ 1.47
CIRBP-240ENST00000592815 PHF23Q9BUL5 403 aaPredicted RBP24.24■■□□□ 1.47
CIRBP-240ENST00000592815 C14orf37Q86TY3 774 aa24.23■■□□□ 1.47
CIRBP-240ENST00000592815 SLAIN2Q9P270 581 aa24.23■■□□□ 1.47
CIRBP-240ENST00000592815 AMOTL2Q9Y2J4 779 aa24.21■■□□□ 1.47
CIRBP-240ENST00000592815 PIK3R4Q99570 1358 aa24.2■■□□□ 1.46
CIRBP-240ENST00000592815 CHD2O14647 1828 aaKnown RBP24.2■■□□□ 1.46
CIRBP-240ENST00000592815 HFM1A2PYH4 1435 aa24.19■■□□□ 1.46
CIRBP-240ENST00000592815 SLC4A1APQ9BWU0 796 aaKnown RBP24.18■■□□□ 1.46
CIRBP-240ENST00000592815 SPHKAPQ2M3C7 1700 aa24.18■■□□□ 1.46
CIRBP-240ENST00000592815 NCOA3Q9Y6Q9 1424 aa24.16■■□□□ 1.46
CIRBP-240ENST00000592815 DIP2AQ14689 1571 aa24.16■■□□□ 1.46
CIRBP-240ENST00000592815 C19orf44Q9H6X5 657 aa24.15■■□□□ 1.46
CIRBP-240ENST00000592815 PTPRUQ92729 1446 aa24.14■■□□□ 1.45
CIRBP-240ENST00000592815 ATF3P18847 181 aa24.13■■□□□ 1.45
CIRBP-240ENST00000592815 ROBO1Q9Y6N7 1651 aa24.12■■□□□ 1.45
CIRBP-240ENST00000592815 TRPM2O94759 1503 aa24.12■■□□□ 1.45
CIRBP-240ENST00000592815 CLTCL1P53675 1640 aa24.11■■□□□ 1.45
CIRBP-240ENST00000592815 CADPS2Q86UW7 1296 aa24.11■■□□□ 1.45
CIRBP-240ENST00000592815 METP08581 1390 aa24.09■■□□□ 1.45
CIRBP-240ENST00000592815 FOXD1Q16676 465 aa24.08■■□□□ 1.45
CIRBP-240ENST00000592815 VGFO15240 615 aaPredicted RBP24.07■■□□□ 1.44
CIRBP-240ENST00000592815 SETBP1Q9Y6X0 1596 aa24.07■■□□□ 1.44
CIRBP-240ENST00000592815 RGS17Q9UGC6 210 aaPredicted RBP24.05■■□□□ 1.44
CIRBP-240ENST00000592815 NRXN3Q9Y4C0 1643 aa24.05■■□□□ 1.44
CIRBP-240ENST00000592815 NEXMIFQ5QGS0 1516 aa24.05■■□□□ 1.44
CIRBP-240ENST00000592815 RPGRIP1LQ68CZ1 1315 aa24.03■■□□□ 1.44
CIRBP-240ENST00000592815 MPHOSPH9Q99550 1183 aa24.01■■□□□ 1.43
CIRBP-240ENST00000592815 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.01■■□□□ 1.43
CIRBP-240ENST00000592815 KIF1BO60333 1816 aa24■■□□□ 1.43
CIRBP-240ENST00000592815 JCADQ9P266 1359 aa24■■□□□ 1.43
CIRBP-240ENST00000592815 BRINP3Q76B58 766 aa23.98■■□□□ 1.43
CIRBP-240ENST00000592815 PHLPP1O60346 1717 aa23.98■■□□□ 1.43
CIRBP-240ENST00000592815 XRN1Q8IZH2 1706 aaKnown RBP23.97■■□□□ 1.43
CIRBP-240ENST00000592815 RGL3Q3MIN7 710 aa23.95■■□□□ 1.42
CIRBP-240ENST00000592815 DCCP43146 1447 aa23.94■■□□□ 1.42
CIRBP-240ENST00000592815 POTEAQ6S8J7 498 aa23.93■■□□□ 1.42
CIRBP-240ENST00000592815 CCDC144AA2RUR9 1427 aa23.93■■□□□ 1.42
CIRBP-240ENST00000592815 COL16A1Q07092 1604 aaPredicted RBP23.9■■□□□ 1.42
CIRBP-240ENST00000592815 MST1RQ04912 1400 aa23.9■■□□□ 1.42
CIRBP-240ENST00000592815 ADGRL3Q9HAR2 1447 aa23.9■■□□□ 1.42
CIRBP-240ENST00000592815 SETD5Q9C0A6 1442 aa23.89■■□□□ 1.41
CIRBP-240ENST00000592815 ROBO2Q9HCK4 1378 aa23.89■■□□□ 1.41
CIRBP-240ENST00000592815 SPATA31A6Q5VVP1 1343 aa23.88■■□□□ 1.41
CIRBP-240ENST00000592815 ADGRF5Q8IZF2 1346 aa23.88■■□□□ 1.41
CIRBP-240ENST00000592815 ACIN1Q9UKV3 1341 aaKnown RBP23.88■■□□□ 1.41
CIRBP-240ENST00000592815 AHDC1Q5TGY3 1603 aaPredicted RBP23.88■■□□□ 1.41
CIRBP-240ENST00000592815 MEX3CQ5U5Q3 659 aaKnown RBP23.86■■□□□ 1.41
CIRBP-240ENST00000592815 DDX17Q92841 729 aaKnown RBP23.85■■□□□ 1.41
CIRBP-240ENST00000592815 PTCH1Q13635 1447 aa23.84■■□□□ 1.41
CIRBP-240ENST00000592815 SPATA31E1Q6ZUB1 1445 aa23.84■■□□□ 1.41
CIRBP-240ENST00000592815 ASXL1Q8IXJ9 1541 aa23.84■■□□□ 1.41
CIRBP-240ENST00000592815 NUTM2BA6NNL0 878 aaPredicted RBP23.83■■□□□ 1.41
CIRBP-240ENST00000592815 NUTM2EB1AL46 878 aaPredicted RBP23.83■■□□□ 1.41
CIRBP-240ENST00000592815 NUTM2AQ8IVF1 878 aaPredicted RBP23.83■■□□□ 1.41
CIRBP-240ENST00000592815 PPLO60437 1756 aa23.83■■□□□ 1.4
CIRBP-240ENST00000592815 ANKRD30BQ9BXX2 1392 aa23.82■■□□□ 1.4
CIRBP-240ENST00000592815 LRRC59Q96AG4 307 aaKnown RBP23.82■■□□□ 1.4
CIRBP-240ENST00000592815 STK26Q9P289 416 aa23.82■■□□□ 1.4
CIRBP-240ENST00000592815 SETD1AO15047 1707 aaKnown RBP23.8■■□□□ 1.4
CIRBP-240ENST00000592815 LRP6O75581 1613 aa23.8■■□□□ 1.4
CIRBP-240ENST00000592815 TMEM132EQ6IEE7 984 aa23.79■■□□□ 1.4
CIRBP-240ENST00000592815 ORAI2Q96SN7 254 aa23.79■■□□□ 1.4
CIRBP-240ENST00000592815 C1orf167Q5SNV9 1468 aa23.79■■□□□ 1.4
CIRBP-240ENST00000592815 NALCNQ8IZF0 1738 aa23.79■■□□□ 1.4
CIRBP-240ENST00000592815 RAB3GAP2Q9H2M9 1393 aa23.78■■□□□ 1.4
CIRBP-240ENST00000592815 PRAG1Q86YV5 1406 aa23.77■■□□□ 1.4
CIRBP-240ENST00000592815 ZNF772Q68DY9 489 aaPredicted RBP23.76■■□□□ 1.39
CIRBP-240ENST00000592815 WAPLQ7Z5K2 1190 aa23.76■■□□□ 1.39
CIRBP-240ENST00000592815 SHPRHQ149N8 1683 aa23.74■■□□□ 1.39
CIRBP-240ENST00000592815 LRPPRCP42704 1394 aaKnown RBP23.73■■□□□ 1.39
CIRBP-240ENST00000592815 NHSL1Q5SYE7 1610 aa23.71■■□□□ 1.39
CIRBP-240ENST00000592815 PIK3C2GO75747 1445 aa23.71■■□□□ 1.39
CIRBP-240ENST00000592815 ABCC11Q96J66 1382 aa23.71■■□□□ 1.39
CIRBP-240ENST00000592815 ESCO1Q5FWF5 840 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms