RNA–Protein interactions for RNA: ENST00000592597.1

POLR2E-210, Transcript of RNA polymerase II subunit E, humanhuman

TSL 2

Gene POLR2E, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2E-210ENST00000592597 KIF15Q9NS87 1388 aa24.26■■□□□ 1.47
POLR2E-210ENST00000592597 SHPRHQ149N8 1683 aa24.24■■□□□ 1.47
POLR2E-210ENST00000592597 MYO5BQ9ULV0 1848 aa24.24■■□□□ 1.47
POLR2E-210ENST00000592597 C14orf37Q86TY3 774 aa24.24■■□□□ 1.47
POLR2E-210ENST00000592597 FGD6Q6ZV73 1430 aa24.24■■□□□ 1.47
POLR2E-210ENST00000592597 ADGRB3O60242 1522 aa24.2■■□□□ 1.47
POLR2E-210ENST00000592597 KANK1Q14678 1352 aa24.2■■□□□ 1.46
POLR2E-210ENST00000592597 MYOM3Q5VTT5 1437 aa24.19■■□□□ 1.46
POLR2E-210ENST00000592597 ERBINQ96RT1 1412 aa24.19■■□□□ 1.46
POLR2E-210ENST00000592597 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.19■■□□□ 1.46
POLR2E-210ENST00000592597 KANK4Q5T7N3 995 aaPredicted RBP24.19■■□□□ 1.46
POLR2E-210ENST00000592597 AHDC1Q5TGY3 1603 aaPredicted RBP24.18■■□□□ 1.46
POLR2E-210ENST00000592597 AFF2P51816 1311 aa24.18■■□□□ 1.46
POLR2E-210ENST00000592597 CROCC2H7BZ55 1655 aa24.16■■□□□ 1.46
POLR2E-210ENST00000592597 CDK12Q9NYV4 1490 aaPredicted RBP24.16■■□□□ 1.46
POLR2E-210ENST00000592597 PPP1R15AO75807 674 aaPredicted RBP24.15■■□□□ 1.46
POLR2E-210ENST00000592597 NOS1P29475 1434 aa24.15■■□□□ 1.46
POLR2E-210ENST00000592597 ABCC5O15440 1437 aa24.14■■□□□ 1.45
POLR2E-210ENST00000592597 DIP2AQ14689 1571 aa24.13■■□□□ 1.45
POLR2E-210ENST00000592597 ATF3P18847 181 aa24.13■■□□□ 1.45
POLR2E-210ENST00000592597 PLEKHG1Q9ULL1 1385 aa24.13■■□□□ 1.45
POLR2E-210ENST00000592597 RGS12O14924 1447 aa24.12■■□□□ 1.45
POLR2E-210ENST00000592597 NUTM2DQ5VT03 806 aaPredicted RBP24.12■■□□□ 1.45
POLR2E-210ENST00000592597 CADPS2Q86UW7 1296 aa24.12■■□□□ 1.45
POLR2E-210ENST00000592597 ZFYVE9O95405 1425 aa24.11■■□□□ 1.45
POLR2E-210ENST00000592597 LMTK2Q8IWU2 1503 aa24.11■■□□□ 1.45
POLR2E-210ENST00000592597 CHIC2Q9UKJ5 165 aa24.11■■□□□ 1.45
POLR2E-210ENST00000592597 GCC2Q8IWJ2 1684 aa24.11■■□□□ 1.45
POLR2E-210ENST00000592597 BRINP3Q76B58 766 aa24.1■■□□□ 1.45
POLR2E-210ENST00000592597 C19orf44Q9H6X5 657 aa24.1■■□□□ 1.45
POLR2E-210ENST00000592597 QTRT2Q9H974 415 aaKnown RBP24.1■■□□□ 1.45
POLR2E-210ENST00000592597 SLC52A1Q9NWF4 448 aa24.1■■□□□ 1.45
POLR2E-210ENST00000592597 RIMS2Q9UQ26 1411 aa24.1■■□□□ 1.45
POLR2E-210ENST00000592597 C8orf37Q96NL8 207 aa24.08■■□□□ 1.45
POLR2E-210ENST00000592597 TBX22Q9Y458 520 aa24.08■■□□□ 1.45
POLR2E-210ENST00000592597 NCOA3Q9Y6Q9 1424 aa24.07■■□□□ 1.44
POLR2E-210ENST00000592597 CHGAP10645 457 aaKnown RBP24.05■■□□□ 1.44
POLR2E-210ENST00000592597 RBM6P78332 1123 aaKnown RBP24.05■■□□□ 1.44
POLR2E-210ENST00000592597 PTPN23Q9H3S7 1636 aa24.03■■□□□ 1.44
POLR2E-210ENST00000592597 DAPK1P53355 1430 aa24.03■■□□□ 1.44
POLR2E-210ENST00000592597 DDX17Q92841 729 aaKnown RBP24.03■■□□□ 1.44
POLR2E-210ENST00000592597 TMEM131LA2VDJ0 1609 aa24.02■■□□□ 1.44
POLR2E-210ENST00000592597 ADAMTS13Q76LX8 1427 aa24.02■■□□□ 1.44
POLR2E-210ENST00000592597 HDGFP51858 240 aaKnown RBP24.01■■□□□ 1.43
POLR2E-210ENST00000592597 AMOTL2Q9Y2J4 779 aa23.99■■□□□ 1.43
POLR2E-210ENST00000592597 ASXL1Q8IXJ9 1541 aa23.99■■□□□ 1.43
POLR2E-210ENST00000592597 VPS8Q8N3P4 1428 aa23.98■■□□□ 1.43
POLR2E-210ENST00000592597 SETBP1Q9Y6X0 1596 aa23.98■■□□□ 1.43
POLR2E-210ENST00000592597 EP400Q96L91 3159 aa23.98■■□□□ 1.43
POLR2E-210ENST00000592597 NHSL1Q5SYE7 1610 aa23.98■■□□□ 1.43
POLR2E-210ENST00000592597 ADAMTS2O95450 1211 aa23.97■■□□□ 1.43
POLR2E-210ENST00000592597 ANKRD30AQ9BXX3 1397 aa23.97■■□□□ 1.43
POLR2E-210ENST00000592597 SETD5Q9C0A6 1442 aa23.97■■□□□ 1.43
POLR2E-210ENST00000592597 PTPRUQ92729 1446 aa23.96■■□□□ 1.43
POLR2E-210ENST00000592597 LRRC59Q96AG4 307 aaKnown RBP23.96■■□□□ 1.43
POLR2E-210ENST00000592597 NGLY1Q96IV0 654 aa23.96■■□□□ 1.43
POLR2E-210ENST00000592597 ZRANB1Q9UGI0 708 aa23.96■■□□□ 1.43
POLR2E-210ENST00000592597 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.94■■□□□ 1.42
POLR2E-210ENST00000592597 ATAD2Q6PL18 1390 aa23.92■■□□□ 1.42
POLR2E-210ENST00000592597 PNPLA6Q8IY17 1366 aa23.92■■□□□ 1.42
POLR2E-210ENST00000592597 MST1RQ04912 1400 aa23.92■■□□□ 1.42
POLR2E-210ENST00000592597 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
POLR2E-210ENST00000592597 RPRD2Q5VT52 1461 aaKnown RBP23.9■■□□□ 1.42
POLR2E-210ENST00000592597 TRPM2O94759 1503 aa23.89■■□□□ 1.41
POLR2E-210ENST00000592597 USP21Q9UK80 565 aa23.86■■□□□ 1.41
POLR2E-210ENST00000592597 DCCP43146 1447 aa23.85■■□□□ 1.41
POLR2E-210ENST00000592597 UNC13BO14795 1591 aa23.85■■□□□ 1.41
POLR2E-210ENST00000592597 XRN1Q8IZH2 1706 aaKnown RBP23.83■■□□□ 1.41
POLR2E-210ENST00000592597 FOXD1Q16676 465 aa23.82■■□□□ 1.4
POLR2E-210ENST00000592597 E9PCH4 1651 aa23.82■■□□□ 1.4
POLR2E-210ENST00000592597 LOC105371045A0A1W2PR82 267 aa23.81■■□□□ 1.4
POLR2E-210ENST00000592597 TRPC5Q9UL62 973 aaPredicted RBP23.81■■□□□ 1.4
POLR2E-210ENST00000592597 ANKRD50Q9ULJ7 1429 aa23.8■■□□□ 1.4
POLR2E-210ENST00000592597 NRXN3Q9Y4C0 1643 aa23.79■■□□□ 1.4
POLR2E-210ENST00000592597 NALCNQ8IZF0 1738 aa23.78■■□□□ 1.4
POLR2E-210ENST00000592597 ADGRL2O95490 1459 aa23.76■■□□□ 1.39
POLR2E-210ENST00000592597 METP08581 1390 aa23.76■■□□□ 1.39
POLR2E-210ENST00000592597 FNBP4Q8N3X1 1017 aaPredicted RBP23.74■■□□□ 1.39
POLR2E-210ENST00000592597 ATRNO75882 1429 aa23.74■■□□□ 1.39
POLR2E-210ENST00000592597 ADGRL3Q9HAR2 1447 aa23.74■■□□□ 1.39
POLR2E-210ENST00000592597 FAM50AQ14320 339 aaKnown RBP23.73■■□□□ 1.39
POLR2E-210ENST00000592597 ORAI2Q96SN7 254 aa23.73■■□□□ 1.39
POLR2E-210ENST00000592597 C1orf167Q5SNV9 1468 aa23.71■■□□□ 1.39
POLR2E-210ENST00000592597 APLP2Q06481 763 aa23.71■■□□□ 1.39
POLR2E-210ENST00000592597 CCDC125Q86Z20 511 aa23.71■■□□□ 1.39
POLR2E-210ENST00000592597 SOS2Q07890 1332 aaPredicted RBP23.69■■□□□ 1.38
POLR2E-210ENST00000592597 DEFB132Q7Z7B7 95 aa23.68■■□□□ 1.38
POLR2E-210ENST00000592597 PTCH1Q13635 1447 aa23.67■■□□□ 1.38
POLR2E-210ENST00000592597 ZNF326Q5BKZ1 582 aaKnown RBP23.67■■□□□ 1.38
POLR2E-210ENST00000592597 LAMC1P11047 1609 aa23.66■■□□□ 1.38
POLR2E-210ENST00000592597 BCL9LQ86UU0 1499 aa23.65■■□□□ 1.38
POLR2E-210ENST00000592597 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
POLR2E-210ENST00000592597 MARF1Q9Y4F3 1742 aaKnown RBP23.63■■□□□ 1.37
POLR2E-210ENST00000592597 BRWD3Q6RI45 1802 aa23.63■■□□□ 1.37
POLR2E-210ENST00000592597 IQGAP3Q86VI3 1631 aa23.62■■□□□ 1.37
POLR2E-210ENST00000592597 COL22A1Q8NFW1 1626 aaPredicted RBP23.62■■□□□ 1.37
POLR2E-210ENST00000592597 XPCQ01831 940 aaPredicted RBP23.59■■□□□ 1.37
POLR2E-210ENST00000592597 BLMP54132 1417 aaPredicted RBP23.59■■□□□ 1.37
POLR2E-210ENST00000592597 MYOM2P54296 1465 aa23.57■■□□□ 1.36
POLR2E-210ENST00000592597 NUP155O75694 1391 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms