RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 IFT172Q9UG01 1749 aa28.77■■■□□ 2.2
TCF3-213ENST00000590436 RIMS2Q9UQ26 1411 aa28.77■■■□□ 2.2
TCF3-213ENST00000590436 TIMELESSQ9UNS1 1208 aa28.76■■■□□ 2.19
TCF3-213ENST00000590436 ZFYVE9O95405 1425 aa28.75■■■□□ 2.19
TCF3-213ENST00000590436 HDGFP51858 240 aaKnown RBP28.74■■■□□ 2.19
TCF3-213ENST00000590436 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.73■■■□□ 2.19
TCF3-213ENST00000590436 L3MBTL2Q969R5 705 aa28.73■■■□□ 2.19
TCF3-213ENST00000590436 DCAF11Q8TEB1 546 aa28.71■■■□□ 2.19
TCF3-213ENST00000590436 STAC3Q96MF2 364 aa28.71■■■□□ 2.19
TCF3-213ENST00000590436 EID1Q9Y6B2 187 aa28.71■■■□□ 2.19
TCF3-213ENST00000590436 MYOM2P54296 1465 aa28.7■■■□□ 2.18
TCF3-213ENST00000590436 SCAF11Q99590 1463 aaKnown RBP28.68■■■□□ 2.18
TCF3-213ENST00000590436 VGFO15240 615 aaPredicted RBP28.68■■■□□ 2.18
TCF3-213ENST00000590436 PPP1R15AO75807 674 aaPredicted RBP28.68■■■□□ 2.18
TCF3-213ENST00000590436 POLR1AO95602 1720 aaPredicted RBP28.67■■■□□ 2.18
TCF3-213ENST00000590436 HSPA2P54652 639 aa28.67■■■□□ 2.18
TCF3-213ENST00000590436 TXNDC2Q86VQ3 553 aa28.67■■■□□ 2.18
TCF3-213ENST00000590436 ANKLE2Q86XL3 938 aa28.66■■■□□ 2.18
TCF3-213ENST00000590436 KDM2AQ9Y2K7 1162 aa28.65■■■□□ 2.18
TCF3-213ENST00000590436 NUTM2DQ5VT03 806 aaPredicted RBP28.64■■■□□ 2.18
TCF3-213ENST00000590436 LTKP29376 864 aa28.63■■■□□ 2.17
TCF3-213ENST00000590436 NRXN1Q9ULB1 1477 aa28.61■■■□□ 2.17
TCF3-213ENST00000590436 PLEKHG1Q9ULL1 1385 aa28.6■■■□□ 2.17
TCF3-213ENST00000590436 ADGRF5Q8IZF2 1346 aa28.59■■■□□ 2.17
TCF3-213ENST00000590436 PIK3C2GO75747 1445 aa28.57■■■□□ 2.16
TCF3-213ENST00000590436 PRAG1Q86YV5 1406 aa28.57■■■□□ 2.16
TCF3-213ENST00000590436 MED14O60244 1454 aa28.56■■■□□ 2.16
TCF3-213ENST00000590436 ZEB1P37275 1124 aaPredicted RBP28.56■■■□□ 2.16
TCF3-213ENST00000590436 NCKAP5LQ9HCH0 1330 aa28.56■■■□□ 2.16
TCF3-213ENST00000590436 SETBP1Q9Y6X0 1596 aa28.55■■■□□ 2.16
TCF3-213ENST00000590436 STRCQ7RTU9 1775 aa28.55■■■□□ 2.16
TCF3-213ENST00000590436 NPHP4O75161 1426 aaPredicted RBP28.54■■■□□ 2.16
TCF3-213ENST00000590436 IQGAP1P46940 1657 aa28.54■■■□□ 2.16
TCF3-213ENST00000590436 BCANQ96GW7 911 aa28.53■■■□□ 2.16
TCF3-213ENST00000590436 LAMC1P11047 1609 aa28.53■■■□□ 2.16
TCF3-213ENST00000590436 NRXN3Q9Y4C0 1643 aa28.51■■■□□ 2.15
TCF3-213ENST00000590436 DIP2AQ14689 1571 aa28.5■■■□□ 2.15
TCF3-213ENST00000590436 KIAA1210Q9ULL0 1709 aa28.49■■■□□ 2.15
TCF3-213ENST00000590436 SENP3Q9H4L4 574 aaPredicted RBP28.48■■■□□ 2.15
TCF3-213ENST00000590436 ALKQ9UM73 1620 aa28.47■■■□□ 2.15
TCF3-213ENST00000590436 TRPM1Q7Z4N2 1603 aa28.47■■■□□ 2.15
TCF3-213ENST00000590436 ADAMTS13Q76LX8 1427 aa28.46■■■□□ 2.15
TCF3-213ENST00000590436 NBPF8Q3BBV2 869 aa28.46■■■□□ 2.15
TCF3-213ENST00000590436 SETD1AO15047 1707 aaKnown RBP28.44■■■□□ 2.14
TCF3-213ENST00000590436 C14orf93Q9H972 538 aaKnown RBP28.44■■■□□ 2.14
TCF3-213ENST00000590436 DMRT2Q9Y5R5 561 aa28.43■■■□□ 2.14
TCF3-213ENST00000590436 RALGAPBQ86X10 1494 aa28.42■■■□□ 2.14
TCF3-213ENST00000590436 CFAP70Q5T0N1 1121 aa28.42■■■□□ 2.14
TCF3-213ENST00000590436 SLC26A8Q96RN1 970 aa28.42■■■□□ 2.14
TCF3-213ENST00000590436 TBX22Q9Y458 520 aa28.42■■■□□ 2.14
TCF3-213ENST00000590436 ROCK2O75116 1388 aaKnown RBP28.37■■■□□ 2.13
TCF3-213ENST00000590436 ASXL1Q8IXJ9 1541 aa28.36■■■□□ 2.13
TCF3-213ENST00000590436 PIK3R4Q99570 1358 aa28.36■■■□□ 2.13
TCF3-213ENST00000590436 ADGRB1O14514 1584 aa28.35■■■□□ 2.13
TCF3-213ENST00000590436 METP08581 1390 aa28.34■■■□□ 2.13
TCF3-213ENST00000590436 NBPF1Q3BBV0 1214 aa28.33■■■□□ 2.13
TCF3-213ENST00000590436 GPRASP1Q5JY77 1395 aa28.33■■■□□ 2.13
TCF3-213ENST00000590436 TMEM132EQ6IEE7 984 aa28.31■■■□□ 2.12
TCF3-213ENST00000590436 CHD2O14647 1828 aaKnown RBP28.29■■■□□ 2.12
TCF3-213ENST00000590436 YTHDC2Q9H6S0 1430 aaKnown RBP28.28■■■□□ 2.12
TCF3-213ENST00000590436 LRPPRCP42704 1394 aaKnown RBP28.28■■■□□ 2.12
TCF3-213ENST00000590436 CARD11Q9BXL7 1154 aa28.28■■■□□ 2.12
TCF3-213ENST00000590436 KNDC1Q76NI1 1749 aa28.26■■■□□ 2.11
TCF3-213ENST00000590436 XRN1Q8IZH2 1706 aaKnown RBP28.26■■■□□ 2.11
TCF3-213ENST00000590436 NWD1Q149M9 1564 aa28.25■■■□□ 2.11
TCF3-213ENST00000590436 PTPRUQ92729 1446 aa28.24■■■□□ 2.11
TCF3-213ENST00000590436 ABCC11Q96J66 1382 aa28.23■■■□□ 2.11
TCF3-213ENST00000590436 TECPR2O15040 1411 aa28.22■■■□□ 2.11
TCF3-213ENST00000590436 KCNA6P17658 529 aa28.22■■■□□ 2.11
TCF3-213ENST00000590436 STK26Q9P289 416 aa28.22■■■□□ 2.11
TCF3-213ENST00000590436 AMOTL2Q9Y2J4 779 aa28.22■■■□□ 2.11
TCF3-213ENST00000590436 DLC1Q96QB1 1528 aa28.21■■■□□ 2.11
TCF3-213ENST00000590436 CPS1P31327 1500 aa28.2■■■□□ 2.1
TCF3-213ENST00000590436 NKTRP30414 1462 aaKnown RBP28.19■■■□□ 2.1
TCF3-213ENST00000590436 PTCH1Q13635 1447 aa28.18■■■□□ 2.1
TCF3-213ENST00000590436 ARHGEF28Q8N1W1 1705 aaKnown RBP28.18■■■□□ 2.1
TCF3-213ENST00000590436 TRAK1Q9UPV9 953 aa28.18■■■□□ 2.1
TCF3-213ENST00000590436 EIF3AQ14152 1382 aaKnown RBP28.18■■■□□ 2.1
TCF3-213ENST00000590436 STRCP1A6NGW2 1772 aa28.16■■■□□ 2.1
TCF3-213ENST00000590436 USP47Q96K76 1375 aa28.15■■■□□ 2.1
TCF3-213ENST00000590436 FAM135BQ49AJ0 1406 aa28.15■■■□□ 2.1
TCF3-213ENST00000590436 ZNF335Q9H4Z2 1342 aaPredicted RBP28.15■■■□□ 2.1
TCF3-213ENST00000590436 SIRT1Q96EB6 747 aa28.13■■■□□ 2.09
TCF3-213ENST00000590436 ROBO2Q9HCK4 1378 aa28.12■■■□□ 2.09
TCF3-213ENST00000590436 EIF4G2P78344 907 aaKnown RBP eCLIP28.11■■■□□ 2.09
TCF3-213ENST00000590436 PRAM1Q96QH2 718 aa28.09■■■□□ 2.09
TCF3-213ENST00000590436 POGKQ9P215 609 aa28.09■■■□□ 2.09
TCF3-213ENST00000590436 CENPJQ9HC77 1338 aaPredicted RBP28.08■■■□□ 2.09
TCF3-213ENST00000590436 PROSER2Q86WR7 435 aaPredicted RBP28.07■■■□□ 2.08
TCF3-213ENST00000590436 QRICH2Q9H0J4 1663 aa28.07■■■□□ 2.08
TCF3-213ENST00000590436 PLEKHH1Q9ULM0 1364 aa28.04■■■□□ 2.08
TCF3-213ENST00000590436 WAPLQ7Z5K2 1190 aa28.04■■■□□ 2.08
TCF3-213ENST00000590436 LTBP4Q8N2S1 1624 aa28.03■■■□□ 2.08
TCF3-213ENST00000590436 ST20-MTHFSA0A0A6YYL1 179 aa28.02■■■□□ 2.08
TCF3-213ENST00000590436 HSPA5P11021 654 aaKnown RBP28.02■■■□□ 2.08
TCF3-213ENST00000590436 LRRC7Q96NW7 1537 aa28.02■■■□□ 2.08
TCF3-213ENST00000590436 SAFB2Q14151 953 aaKnown RBP eCLIP28.01■■■□□ 2.07
TCF3-213ENST00000590436 NCOA3Q9Y6Q9 1424 aa28.01■■■□□ 2.07
TCF3-213ENST00000590436 TMEM94Q12767 1356 aa28■■■□□ 2.07
TCF3-213ENST00000590436 SBNO2Q9Y2G9 1366 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms