RNA–Protein interactions for RNA: ENST00000590371.5

LDLRAD4-215, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 2

Gene LDLRAD4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-215ENST00000590371 TRPM2O94759 1503 aa27.38■■□□□ 1.97
LDLRAD4-215ENST00000590371 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.38■■□□□ 1.97
LDLRAD4-215ENST00000590371 SENP3Q9H4L4 574 aaPredicted RBP27.38■■□□□ 1.97
LDLRAD4-215ENST00000590371 SETD5Q9C0A6 1442 aa27.38■■□□□ 1.97
LDLRAD4-215ENST00000590371 STRCP1A6NGW2 1772 aa27.36■■□□□ 1.97
LDLRAD4-215ENST00000590371 CLTCL1P53675 1640 aa27.35■■□□□ 1.97
LDLRAD4-215ENST00000590371 ZNF326Q5BKZ1 582 aaKnown RBP27.35■■□□□ 1.97
LDLRAD4-215ENST00000590371 SLC26A8Q96RN1 970 aa27.35■■□□□ 1.97
LDLRAD4-215ENST00000590371 NUTM2DQ5VT03 806 aaPredicted RBP27.34■■□□□ 1.97
LDLRAD4-215ENST00000590371 KIF1BO60333 1816 aa27.33■■□□□ 1.97
LDLRAD4-215ENST00000590371 UBAP1LF5GYI3 381 aa27.33■■□□□ 1.97
LDLRAD4-215ENST00000590371 ACIN1Q9UKV3 1341 aaKnown RBP27.33■■□□□ 1.97
LDLRAD4-215ENST00000590371 PLEKHG1Q9ULL1 1385 aa27.33■■□□□ 1.97
LDLRAD4-215ENST00000590371 FOXD1Q16676 465 aa27.29■■□□□ 1.96
LDLRAD4-215ENST00000590371 MPHOSPH9Q99550 1183 aa27.29■■□□□ 1.96
LDLRAD4-215ENST00000590371 LRRC7Q96NW7 1537 aa27.27■■□□□ 1.96
LDLRAD4-215ENST00000590371 RAB3GAP2Q9H2M9 1393 aa27.27■■□□□ 1.96
LDLRAD4-215ENST00000590371 KCNA6P17658 529 aa27.24■■□□□ 1.95
LDLRAD4-215ENST00000590371 TOM1O60784 492 aa27.23■■□□□ 1.95
LDLRAD4-215ENST00000590371 SCAF1Q9H7N4 1312 aaKnown RBP27.22■■□□□ 1.95
LDLRAD4-215ENST00000590371 DIP2AQ14689 1571 aa27.2■■□□□ 1.94
LDLRAD4-215ENST00000590371 CCDC144AA2RUR9 1427 aa27.19■■□□□ 1.94
LDLRAD4-215ENST00000590371 TBX22Q9Y458 520 aa27.19■■□□□ 1.94
LDLRAD4-215ENST00000590371 NWD1Q149M9 1564 aa27.18■■□□□ 1.94
LDLRAD4-215ENST00000590371 NEXMIFQ5QGS0 1516 aa27.18■■□□□ 1.94
LDLRAD4-215ENST00000590371 PIP4K2BP78356 416 aa27.18■■□□□ 1.94
LDLRAD4-215ENST00000590371 ADAMTS13Q76LX8 1427 aa27.17■■□□□ 1.94
LDLRAD4-215ENST00000590371 PROSER2Q86WR7 435 aaPredicted RBP27.17■■□□□ 1.94
LDLRAD4-215ENST00000590371 CHD2O14647 1828 aaKnown RBP27.17■■□□□ 1.94
LDLRAD4-215ENST00000590371 NKTRP30414 1462 aaKnown RBP27.16■■□□□ 1.94
LDLRAD4-215ENST00000590371 XIRP1Q702N8 1843 aaKnown RBP27.16■■□□□ 1.94
LDLRAD4-215ENST00000590371 TMEM94Q12767 1356 aa27.13■■□□□ 1.93
LDLRAD4-215ENST00000590371 SETBP1Q9Y6X0 1596 aa27.12■■□□□ 1.93
LDLRAD4-215ENST00000590371 NRXN3Q9Y4C0 1643 aa27.11■■□□□ 1.93
LDLRAD4-215ENST00000590371 RPGRIP1LQ68CZ1 1315 aa27.11■■□□□ 1.93
LDLRAD4-215ENST00000590371 PIK3R4Q99570 1358 aa27.1■■□□□ 1.93
LDLRAD4-215ENST00000590371 VGFO15240 615 aaPredicted RBP27.1■■□□□ 1.93
LDLRAD4-215ENST00000590371 RBM33Q96EV2 1170 aaKnown RBP27.1■■□□□ 1.93
LDLRAD4-215ENST00000590371 PPLO60437 1756 aa27.08■■□□□ 1.93
LDLRAD4-215ENST00000590371 HRCP23327 699 aa27.07■■□□□ 1.92
LDLRAD4-215ENST00000590371 RGL3Q3MIN7 710 aa27.07■■□□□ 1.92
LDLRAD4-215ENST00000590371 ALKQ9UM73 1620 aa27.05■■□□□ 1.92
LDLRAD4-215ENST00000590371 AMOTL2Q9Y2J4 779 aa27.04■■□□□ 1.92
LDLRAD4-215ENST00000590371 MSH6P52701 1360 aa27.03■■□□□ 1.92
LDLRAD4-215ENST00000590371 C14orf37Q86TY3 774 aa27.03■■□□□ 1.92
LDLRAD4-215ENST00000590371 SPATA31E1Q6ZUB1 1445 aa27.01■■□□□ 1.91
LDLRAD4-215ENST00000590371 PTPRUQ92729 1446 aa27.01■■□□□ 1.91
LDLRAD4-215ENST00000590371 METP08581 1390 aa26.99■■□□□ 1.91
LDLRAD4-215ENST00000590371 XRN1Q8IZH2 1706 aaKnown RBP26.97■■□□□ 1.91
LDLRAD4-215ENST00000590371 IFT172Q9UG01 1749 aa26.97■■□□□ 1.91
LDLRAD4-215ENST00000590371 HSPA1LP34931 641 aa26.97■■□□□ 1.91
LDLRAD4-215ENST00000590371 ANKRD30BQ9BXX2 1392 aa26.97■■□□□ 1.91
LDLRAD4-215ENST00000590371 NCOA3Q9Y6Q9 1424 aa26.96■■□□□ 1.91
LDLRAD4-215ENST00000590371 SETD1AO15047 1707 aaKnown RBP26.93■■□□□ 1.9
LDLRAD4-215ENST00000590371 ADGRF5Q8IZF2 1346 aa26.92■■□□□ 1.9
LDLRAD4-215ENST00000590371 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.89■■□□□ 1.9
LDLRAD4-215ENST00000590371 ATF3P18847 181 aa26.88■■□□□ 1.89
LDLRAD4-215ENST00000590371 C19orf44Q9H6X5 657 aa26.88■■□□□ 1.89
LDLRAD4-215ENST00000590371 ROBO1Q9Y6N7 1651 aa26.86■■□□□ 1.89
LDLRAD4-215ENST00000590371 FAM135BQ49AJ0 1406 aa26.86■■□□□ 1.89
LDLRAD4-215ENST00000590371 SLAIN2Q9P270 581 aa26.86■■□□□ 1.89
LDLRAD4-215ENST00000590371 CADPS2Q86UW7 1296 aa26.85■■□□□ 1.89
LDLRAD4-215ENST00000590371 PIK3C2GO75747 1445 aa26.83■■□□□ 1.89
LDLRAD4-215ENST00000590371 PTCH1Q13635 1447 aa26.82■■□□□ 1.88
LDLRAD4-215ENST00000590371 MYOM2P54296 1465 aa26.81■■□□□ 1.88
LDLRAD4-215ENST00000590371 DISP3Q9P2K9 1392 aa26.79■■□□□ 1.88
LDLRAD4-215ENST00000590371 DCCP43146 1447 aa26.79■■□□□ 1.88
LDLRAD4-215ENST00000590371 ROBO2Q9HCK4 1378 aa26.78■■□□□ 1.88
LDLRAD4-215ENST00000590371 ADGRL3Q9HAR2 1447 aa26.78■■□□□ 1.88
LDLRAD4-215ENST00000590371 NALCNQ8IZF0 1738 aa26.78■■□□□ 1.88
LDLRAD4-215ENST00000590371 STK26Q9P289 416 aa26.77■■□□□ 1.88
LDLRAD4-215ENST00000590371 KDM2AQ9Y2K7 1162 aa26.77■■□□□ 1.88
LDLRAD4-215ENST00000590371 TMEM132EQ6IEE7 984 aa26.76■■□□□ 1.87
LDLRAD4-215ENST00000590371 DCAF11Q8TEB1 546 aa26.76■■□□□ 1.87
LDLRAD4-215ENST00000590371 LAMC1P11047 1609 aa26.76■■□□□ 1.87
LDLRAD4-215ENST00000590371 NRXN1Q9ULB1 1477 aa26.75■■□□□ 1.87
LDLRAD4-215ENST00000590371 PRAG1Q86YV5 1406 aa26.74■■□□□ 1.87
LDLRAD4-215ENST00000590371 TRIM26Q12899 539 aaPredicted RBP26.74■■□□□ 1.87
LDLRAD4-215ENST00000590371 ASXL1Q8IXJ9 1541 aa26.73■■□□□ 1.87
LDLRAD4-215ENST00000590371 PHLPP1O60346 1717 aa26.73■■□□□ 1.87
LDLRAD4-215ENST00000590371 LRPPRCP42704 1394 aaKnown RBP26.72■■□□□ 1.87
LDLRAD4-215ENST00000590371 CFAP70Q5T0N1 1121 aa26.72■■□□□ 1.87
LDLRAD4-215ENST00000590371 C14orf93Q9H972 538 aaKnown RBP26.72■■□□□ 1.87
LDLRAD4-215ENST00000590371 KNDC1Q76NI1 1749 aa26.7■■□□□ 1.87
LDLRAD4-215ENST00000590371 YTHDC2Q9H6S0 1430 aaKnown RBP26.7■■□□□ 1.86
LDLRAD4-215ENST00000590371 DHX57Q6P158 1386 aaKnown RBP26.69■■□□□ 1.86
LDLRAD4-215ENST00000590371 TECPR2O15040 1411 aa26.68■■□□□ 1.86
LDLRAD4-215ENST00000590371 MST1RQ04912 1400 aa26.68■■□□□ 1.86
LDLRAD4-215ENST00000590371 STAC3Q96MF2 364 aa26.68■■□□□ 1.86
LDLRAD4-215ENST00000590371 ABCC11Q96J66 1382 aa26.68■■□□□ 1.86
LDLRAD4-215ENST00000590371 MED1Q15648 1581 aaPredicted RBP26.67■■□□□ 1.86
LDLRAD4-215ENST00000590371 BRINP3Q76B58 766 aa26.65■■□□□ 1.86
LDLRAD4-215ENST00000590371 WAPLQ7Z5K2 1190 aa26.65■■□□□ 1.86
LDLRAD4-215ENST00000590371 AHDC1Q5TGY3 1603 aaPredicted RBP26.61■■□□□ 1.85
LDLRAD4-215ENST00000590371 PLEKHH1Q9ULM0 1364 aa26.6■■□□□ 1.85
LDLRAD4-215ENST00000590371 COL16A1Q07092 1604 aaPredicted RBP26.6■■□□□ 1.85
LDLRAD4-215ENST00000590371 C1orf167Q5SNV9 1468 aa26.6■■□□□ 1.85
LDLRAD4-215ENST00000590371 CDC42BPGQ6DT37 1551 aa26.59■■□□□ 1.85
LDLRAD4-215ENST00000590371 PHF23Q9BUL5 403 aaPredicted RBP26.58■■□□□ 1.85
LDLRAD4-215ENST00000590371 SIRT1Q96EB6 747 aa26.57■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms