RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 ZNF777Q9ULD5 760 aaPredicted RBP10.89□□□□□ -0.67
SMAD4-210ENST00000590061 CDC42BPAQ5VT25 1732 aa10.89□□□□□ -0.67
SMAD4-210ENST00000590061 MARVELD3Q96A59 401 aa10.88□□□□□ -0.67
SMAD4-210ENST00000590061 PCDH10Q9P2E7 1040 aa10.88□□□□□ -0.67
SMAD4-210ENST00000590061 ROCK1Q13464 1354 aa10.88□□□□□ -0.67
SMAD4-210ENST00000590061 FANCAO15360 1455 aa10.87□□□□□ -0.67
SMAD4-210ENST00000590061 DOK7Q18PE1 504 aa10.87□□□□□ -0.67
SMAD4-210ENST00000590061 CAMSAP2Q08AD1 1489 aa10.87□□□□□ -0.67
SMAD4-210ENST00000590061 ARHGEF5Q12774 1597 aa10.86□□□□□ -0.67
SMAD4-210ENST00000590061 TTC37Q6PGP7 1564 aa10.86□□□□□ -0.67
SMAD4-210ENST00000590061 AKNAQ7Z591 1439 aa10.86□□□□□ -0.67
SMAD4-210ENST00000590061 C2orf72A6NCS6 295 aa10.86□□□□□ -0.67
SMAD4-210ENST00000590061 AMER1Q5JTC6 1135 aaPredicted RBP10.86□□□□□ -0.67
SMAD4-210ENST00000590061 ANKRD30AQ9BXX3 1397 aa10.86□□□□□ -0.67
SMAD4-210ENST00000590061 SHANK2Q9UPX8 1470 aa10.86□□□□□ -0.67
SMAD4-210ENST00000590061 RTN4Q9NQC3 1192 aaKnown RBP10.85□□□□□ -0.67
SMAD4-210ENST00000590061 CDC42BPBQ9Y5S2 1711 aa10.84□□□□□ -0.67
SMAD4-210ENST00000590061 HOXB1P14653 301 aaPredicted RBP10.84□□□□□ -0.67
SMAD4-210ENST00000590061 CCDC141Q6ZP82 1450 aa10.84□□□□□ -0.67
SMAD4-210ENST00000590061 DIP2BQ9P265 1576 aa10.84□□□□□ -0.67
SMAD4-210ENST00000590061 DAPK1P53355 1430 aa10.84□□□□□ -0.67
SMAD4-210ENST00000590061 GTPBP6O43824 516 aaPredicted RBP10.83□□□□□ -0.68
SMAD4-210ENST00000590061 DNMT1P26358 1616 aaKnown RBP10.83□□□□□ -0.68
SMAD4-210ENST00000590061 MAP3K4Q9Y6R4 1608 aa10.83□□□□□ -0.68
SMAD4-210ENST00000590061 RTEL1-TNFRSF6BF6WH68 1400 aa10.83□□□□□ -0.68
SMAD4-210ENST00000590061 ADGRL1O94910 1474 aa10.82□□□□□ -0.68
SMAD4-210ENST00000590061 POTEB3A0JP26 581 aa10.82□□□□□ -0.68
SMAD4-210ENST00000590061 ITGAEP38570 1179 aa10.82□□□□□ -0.68
SMAD4-210ENST00000590061 EMP3P54852 163 aa10.82□□□□□ -0.68
SMAD4-210ENST00000590061 POTEBQ6S5H4 581 aa10.82□□□□□ -0.68
SMAD4-210ENST00000590061 ZNF518AQ6AHZ1 1483 aa10.81□□□□□ -0.68
SMAD4-210ENST00000590061 CDAN1Q8IWY9 1227 aa10.81□□□□□ -0.68
SMAD4-210ENST00000590061 ZSWIM6Q9HCJ5 1215 aa10.81□□□□□ -0.68
SMAD4-210ENST00000590061 HFM1A2PYH4 1435 aa10.81□□□□□ -0.68
SMAD4-210ENST00000590061 ABCC5O15440 1437 aa10.81□□□□□ -0.68
SMAD4-210ENST00000590061 SETD5Q9C0A6 1442 aa10.81□□□□□ -0.68
SMAD4-210ENST00000590061 SPAG9O60271 1321 aaKnown RBP10.81□□□□□ -0.68
SMAD4-210ENST00000590061 MBD5Q9P267 1494 aa10.81□□□□□ -0.68
SMAD4-210ENST00000590061 ABCC1P33527 1531 aa10.8□□□□□ -0.68
SMAD4-210ENST00000590061 HNRNPMP52272 730 aaKnown RBP eCLIP10.8□□□□□ -0.683e-7■□□□□ 10.2
SMAD4-210ENST00000590061 GPR153Q6NV75 609 aa10.8□□□□□ -0.68
SMAD4-210ENST00000590061 RYDENQ9NUL5 291 aaKnown RBP10.8□□□□□ -0.68
SMAD4-210ENST00000590061 SCAPERQ9BY12 1400 aa10.8□□□□□ -0.68
SMAD4-210ENST00000590061 SAMD9LQ8IVG5 1584 aa10.8□□□□□ -0.68
SMAD4-210ENST00000590061 ZNF644Q9H582 1327 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-210ENST00000590061 DENND4BO75064 1496 aaPredicted RBP10.8□□□□□ -0.68
SMAD4-210ENST00000590061 ADGRL2O95490 1459 aa10.8□□□□□ -0.68
SMAD4-210ENST00000590061 C9orf84Q5VXU9 1444 aa10.79□□□□□ -0.68
SMAD4-210ENST00000590061 ZNF710Q8N1W2 664 aa10.79□□□□□ -0.68
SMAD4-210ENST00000590061 MAST1Q9Y2H9 1570 aa10.78□□□□□ -0.68
SMAD4-210ENST00000590061 NCOA1Q15788 1441 aa10.78□□□□□ -0.68
SMAD4-210ENST00000590061 MAGI2Q86UL8 1455 aa10.78□□□□□ -0.68
SMAD4-210ENST00000590061 CLSPNQ9HAW4 1339 aa10.78□□□□□ -0.68
SMAD4-210ENST00000590061 RIMBP2O15034 1052 aa10.77□□□□□ -0.69
SMAD4-210ENST00000590061 HS3ST6Q96QI5 342 aa10.77□□□□□ -0.69
SMAD4-210ENST00000590061 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.69
SMAD4-210ENST00000590061 SYCP2Q9BX26 1530 aa10.77□□□□□ -0.69
SMAD4-210ENST00000590061 ADGBQ8N7X0 1667 aa10.76□□□□□ -0.69
SMAD4-210ENST00000590061 TMC2Q8TDI7 906 aa10.76□□□□□ -0.69
SMAD4-210ENST00000590061 POGZQ7Z3K3 1410 aa10.75□□□□□ -0.69
SMAD4-210ENST00000590061 MLH3Q9UHC1 1453 aa10.75□□□□□ -0.69
SMAD4-210ENST00000590061 SLC34A2O95436 690 aa10.75□□□□□ -0.69
SMAD4-210ENST00000590061 ZEB1P37275 1124 aaPredicted RBP10.75□□□□□ -0.69
SMAD4-210ENST00000590061 CHIC2Q9UKJ5 165 aa10.75□□□□□ -0.69
SMAD4-210ENST00000590061 CROCC2H7BZ55 1655 aa10.75□□□□□ -0.69
SMAD4-210ENST00000590061 KIF13AQ9H1H9 1805 aa10.74□□□□□ -0.69
SMAD4-210ENST00000590061 FAM205CA6NFA0 338 aa10.74□□□□□ -0.69
SMAD4-210ENST00000590061 GPHNQ9NQX3 736 aaPredicted RBP10.74□□□□□ -0.69
SMAD4-210ENST00000590061 KIF15Q9NS87 1388 aa10.74□□□□□ -0.69
SMAD4-210ENST00000590061 NAIPQ13075 1403 aa10.74□□□□□ -0.69
SMAD4-210ENST00000590061 PLXNC1O60486 1568 aa10.73□□□□□ -0.69
SMAD4-210ENST00000590061 FOXK1P85037 733 aa10.73□□□□□ -0.69
SMAD4-210ENST00000590061 AFAP1Q8N556 730 aa10.73□□□□□ -0.69
SMAD4-210ENST00000590061 CRISPLD2Q9H0B8 497 aa10.73□□□□□ -0.69
SMAD4-210ENST00000590061 ANKRD50Q9ULJ7 1429 aa10.73□□□□□ -0.69
SMAD4-210ENST00000590061 DUOX2Q9NRD8 1548 aa10.73□□□□□ -0.69
SMAD4-210ENST00000590061 KDM4FA0A1W2PPD8 638 aa10.72□□□□□ -0.69
SMAD4-210ENST00000590061 RRP7BPQ9NSQ0 103 aa10.72□□□□□ -0.69
SMAD4-210ENST00000590061 RAB3GAP2Q9H2M9 1393 aa10.72□□□□□ -0.69
SMAD4-210ENST00000590061 ERBINQ96RT1 1412 aa10.72□□□□□ -0.69
SMAD4-210ENST00000590061 TRAPPC8Q9Y2L5 1435 aa10.72□□□□□ -0.69
SMAD4-210ENST00000590061 KDM5CP41229 1560 aa10.71□□□□□ -0.69
SMAD4-210ENST00000590061 PTPRKQ15262 1439 aa10.71□□□□□ -0.69
SMAD4-210ENST00000590061 ARSIQ5FYB1 569 aa10.71□□□□□ -0.69
SMAD4-210ENST00000590061 GCC2Q8IWJ2 1684 aa10.71□□□□□ -0.69
SMAD4-210ENST00000590061 KHSRPQ92945 711 aaKnown RBP eCLIP10.71□□□□□ -0.697e-7■■■□□ 16.1
SMAD4-210ENST00000590061 TSPOAP1O95153 1857 aa10.7□□□□□ -0.7
SMAD4-210ENST00000590061 ATP7AQ04656 1500 aa10.7□□□□□ -0.7
SMAD4-210ENST00000590061 ARHGEF12Q9NZN5 1544 aa10.7□□□□□ -0.7
SMAD4-210ENST00000590061 DHX29Q7Z478 1369 aaKnown RBP10.7□□□□□ -0.7
SMAD4-210ENST00000590061 NCKAP5LQ9HCH0 1330 aa10.7□□□□□ -0.7
SMAD4-210ENST00000590061 DSG2Q14126 1118 aa10.7□□□□□ -0.7
SMAD4-210ENST00000590061 CCER1Q8TC90 406 aaPredicted RBP10.7□□□□□ -0.7
SMAD4-210ENST00000590061 KRTAP3-3Q9BYR6 98 aa10.7□□□□□ -0.7
SMAD4-210ENST00000590061 KRTAP3-2Q9BYR7 98 aa10.7□□□□□ -0.7
SMAD4-210ENST00000590061 ZMYM4Q5VZL5 1548 aa10.69□□□□□ -0.7
SMAD4-210ENST00000590061 KANK1Q14678 1352 aa10.69□□□□□ -0.7
SMAD4-210ENST00000590061 HECW2Q9P2P5 1572 aa10.69□□□□□ -0.7
SMAD4-210ENST00000590061 TRIM52Q96A61 297 aa10.68□□□□□ -0.7
SMAD4-210ENST00000590061 INO80Q9ULG1 1556 aaPredicted RBP10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms