RNA–Protein interactions for RNA: ENST00000589253.1

TOMM40-204, Transcript of translocase of outer mitochondrial membrane 40, humanhuman

TSL 3

Gene TOMM40, Length 207 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40-204ENST00000589253 TET3O43151 1660 aa17.77■□□□□ 0.43
TOMM40-204ENST00000589253 NWD1Q149M9 1564 aa17.76■□□□□ 0.43
TOMM40-204ENST00000589253 RBM33Q96EV2 1170 aaKnown RBP17.76■□□□□ 0.43
TOMM40-204ENST00000589253 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
TOMM40-204ENST00000589253 SLC52A1Q9NWF4 448 aa17.75■□□□□ 0.43
TOMM40-204ENST00000589253 CHIC2Q9UKJ5 165 aa17.74■□□□□ 0.43
TOMM40-204ENST00000589253 JCADQ9P266 1359 aa17.74■□□□□ 0.43
TOMM40-204ENST00000589253 PPP1R15AO75807 674 aaPredicted RBP17.73■□□□□ 0.43
TOMM40-204ENST00000589253 HDGFP51858 240 aaKnown RBP17.73■□□□□ 0.43
TOMM40-204ENST00000589253 SLAIN2Q9P270 581 aa17.73■□□□□ 0.43
TOMM40-204ENST00000589253 NOS1P29475 1434 aa17.72■□□□□ 0.43
TOMM40-204ENST00000589253 GCC2Q8IWJ2 1684 aa17.72■□□□□ 0.43
TOMM40-204ENST00000589253 C14orf37Q86TY3 774 aa17.7■□□□□ 0.42
TOMM40-204ENST00000589253 RPRD2Q5VT52 1461 aaKnown RBP17.69■□□□□ 0.42
TOMM40-204ENST00000589253 MEX3CQ5U5Q3 659 aaKnown RBP17.69■□□□□ 0.42
TOMM40-204ENST00000589253 ROCK1Q13464 1354 aa17.68■□□□□ 0.42
TOMM40-204ENST00000589253 PLEKHG1Q9ULL1 1385 aa17.68■□□□□ 0.42
TOMM40-204ENST00000589253 SETD1AO15047 1707 aaKnown RBP17.68■□□□□ 0.42
TOMM40-204ENST00000589253 ITGAEP38570 1179 aa17.68■□□□□ 0.42
TOMM40-204ENST00000589253 SPATA31A6Q5VVP1 1343 aa17.66■□□□□ 0.42
TOMM40-204ENST00000589253 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
TOMM40-204ENST00000589253 RIMS2Q9UQ26 1411 aa17.65■□□□□ 0.42
TOMM40-204ENST00000589253 ZFYVE9O95405 1425 aa17.64■□□□□ 0.42
TOMM40-204ENST00000589253 NCOA3Q9Y6Q9 1424 aa17.64■□□□□ 0.42
TOMM40-204ENST00000589253 ZNF772Q68DY9 489 aaPredicted RBP17.64■□□□□ 0.41
TOMM40-204ENST00000589253 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.64■□□□□ 0.41
TOMM40-204ENST00000589253 COL16A1Q07092 1604 aaPredicted RBP17.64■□□□□ 0.41
TOMM40-204ENST00000589253 CHGAP10645 457 aaKnown RBP17.63■□□□□ 0.41
TOMM40-204ENST00000589253 ATF3P18847 181 aa17.63■□□□□ 0.41
TOMM40-204ENST00000589253 ANKRD50Q9ULJ7 1429 aa17.63■□□□□ 0.41
TOMM40-204ENST00000589253 CADPS2Q86UW7 1296 aa17.62■□□□□ 0.41
TOMM40-204ENST00000589253 TBX22Q9Y458 520 aa17.62■□□□□ 0.41
TOMM40-204ENST00000589253 MYO5BQ9ULV0 1848 aa17.62■□□□□ 0.41
TOMM40-204ENST00000589253 UNC13BO14795 1591 aa17.62■□□□□ 0.41
TOMM40-204ENST00000589253 NAIPQ13075 1403 aa17.61■□□□□ 0.41
TOMM40-204ENST00000589253 DIP2AQ14689 1571 aa17.61■□□□□ 0.41
TOMM40-204ENST00000589253 TMEM131LA2VDJ0 1609 aa17.61■□□□□ 0.41
TOMM40-204ENST00000589253 TRIM52Q96A61 297 aa17.59■□□□□ 0.41
TOMM40-204ENST00000589253 LRP6O75581 1613 aa17.58■□□□□ 0.41
TOMM40-204ENST00000589253 AHDC1Q5TGY3 1603 aaPredicted RBP17.58■□□□□ 0.41
TOMM40-204ENST00000589253 HFM1A2PYH4 1435 aa17.58■□□□□ 0.41
TOMM40-204ENST00000589253 C19orf44Q9H6X5 657 aa17.58■□□□□ 0.4
TOMM40-204ENST00000589253 SHPRHQ149N8 1683 aa17.58■□□□□ 0.4
TOMM40-204ENST00000589253 PIK3R4Q99570 1358 aa17.57■□□□□ 0.4
TOMM40-204ENST00000589253 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.57■□□□□ 0.4
TOMM40-204ENST00000589253 TRPM2O94759 1503 aa17.56■□□□□ 0.4
TOMM40-204ENST00000589253 RXRBP28702 533 aa17.54■□□□□ 0.4
TOMM40-204ENST00000589253 NUTM2DQ5VT03 806 aaPredicted RBP17.54■□□□□ 0.4
TOMM40-204ENST00000589253 UPF1Q92900 1129 aaKnown RBP eCLIP17.54■□□□□ 0.48e-7■■□□□ 14.2
TOMM40-204ENST00000589253 ADAMTS13Q76LX8 1427 aa17.54■□□□□ 0.4
TOMM40-204ENST00000589253 IQGAP3Q86VI3 1631 aa17.54■□□□□ 0.4
TOMM40-204ENST00000589253 NUTM2BA6NNL0 878 aaPredicted RBP17.52■□□□□ 0.4
TOMM40-204ENST00000589253 NUTM2EB1AL46 878 aaPredicted RBP17.52■□□□□ 0.4
TOMM40-204ENST00000589253 NUTM2AQ8IVF1 878 aaPredicted RBP17.52■□□□□ 0.4
TOMM40-204ENST00000589253 AMOTL2Q9Y2J4 779 aa17.51■□□□□ 0.39
TOMM40-204ENST00000589253 E9PCH4 1651 aa17.51■□□□□ 0.39
TOMM40-204ENST00000589253 DCCP43146 1447 aa17.5■□□□□ 0.39
TOMM40-204ENST00000589253 BRINP3Q76B58 766 aa17.49■□□□□ 0.39
TOMM40-204ENST00000589253 CDK12Q9NYV4 1490 aaPredicted RBP17.49■□□□□ 0.39
TOMM40-204ENST00000589253 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
TOMM40-204ENST00000589253 AFF2P51816 1311 aa17.47■□□□□ 0.39
TOMM40-204ENST00000589253 SETD5Q9C0A6 1442 aa17.45■□□□□ 0.38
TOMM40-204ENST00000589253 LRRC59Q96AG4 307 aaKnown RBP17.44■□□□□ 0.38
TOMM40-204ENST00000589253 PTPRUQ92729 1446 aa17.44■□□□□ 0.38
TOMM40-204ENST00000589253 NUP155O75694 1391 aa17.43■□□□□ 0.38
TOMM40-204ENST00000589253 NHSL1Q5SYE7 1610 aa17.43■□□□□ 0.38
TOMM40-204ENST00000589253 XRN1Q8IZH2 1706 aaKnown RBP17.42■□□□□ 0.38
TOMM40-204ENST00000589253 MST1RQ04912 1400 aa17.42■□□□□ 0.38
TOMM40-204ENST00000589253 ZNF326Q5BKZ1 582 aaKnown RBP17.42■□□□□ 0.38
TOMM40-204ENST00000589253 C8orf37Q96NL8 207 aa17.42■□□□□ 0.38
TOMM40-204ENST00000589253 RAB3GAP2Q9H2M9 1393 aa17.41■□□□□ 0.38
TOMM40-204ENST00000589253 SETBP1Q9Y6X0 1596 aa17.41■□□□□ 0.38
TOMM40-204ENST00000589253 TRIM26Q12899 539 aaPredicted RBP17.4■□□□□ 0.38
TOMM40-204ENST00000589253 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
TOMM40-204ENST00000589253 QTRT2Q9H974 415 aaKnown RBP17.39■□□□□ 0.37
TOMM40-204ENST00000589253 SPHKAPQ2M3C7 1700 aa17.38■□□□□ 0.37
TOMM40-204ENST00000589253 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
TOMM40-204ENST00000589253 ADGRL3Q9HAR2 1447 aa17.38■□□□□ 0.37
TOMM40-204ENST00000589253 NGLY1Q96IV0 654 aa17.37■□□□□ 0.37
TOMM40-204ENST00000589253 RGS12O14924 1447 aa17.37■□□□□ 0.37
TOMM40-204ENST00000589253 FOXD1Q16676 465 aa17.36■□□□□ 0.37
TOMM40-204ENST00000589253 PNPLA6Q8IY17 1366 aa17.36■□□□□ 0.37
TOMM40-204ENST00000589253 METP08581 1390 aa17.35■□□□□ 0.37
TOMM40-204ENST00000589253 NALCNQ8IZF0 1738 aa17.33■□□□□ 0.37
TOMM40-204ENST00000589253 ATAD2Q6PL18 1390 aa17.33■□□□□ 0.36
TOMM40-204ENST00000589253 ADAMTS2O95450 1211 aa17.33■□□□□ 0.36
TOMM40-204ENST00000589253 DDX17Q92841 729 aaKnown RBP17.33■□□□□ 0.36
TOMM40-204ENST00000589253 C1orf167Q5SNV9 1468 aa17.3■□□□□ 0.36
TOMM40-204ENST00000589253 USP21Q9UK80 565 aa17.29■□□□□ 0.36
TOMM40-204ENST00000589253 NEXMIFQ5QGS0 1516 aa17.29■□□□□ 0.36
TOMM40-204ENST00000589253 TRPC5Q9UL62 973 aaPredicted RBP17.28■□□□□ 0.36
TOMM40-204ENST00000589253 CLTCL1P53675 1640 aa17.28■□□□□ 0.36
TOMM40-204ENST00000589253 KIF1BO60333 1816 aa17.27■□□□□ 0.36
TOMM40-204ENST00000589253 HRCP23327 699 aa17.27■□□□□ 0.36
TOMM40-204ENST00000589253 PTCH1Q13635 1447 aa17.27■□□□□ 0.35
TOMM40-204ENST00000589253 LAMC1P11047 1609 aa17.26■□□□□ 0.35
TOMM40-204ENST00000589253 VGFO15240 615 aaPredicted RBP17.25■□□□□ 0.35
TOMM40-204ENST00000589253 SLC4A1APQ9BWU0 796 aaKnown RBP17.25■□□□□ 0.35
TOMM40-204ENST00000589253 SOS2Q07890 1332 aaPredicted RBP17.24■□□□□ 0.35
TOMM40-204ENST00000589253 MPHOSPH9Q99550 1183 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms