RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 NKX2-3Q8TAU0 364 aa9.16□□□□□ -0.94
SMAD4-207ENST00000589076 TSHZ2Q9NRE2 1034 aa9.16□□□□□ -0.94
SMAD4-207ENST00000589076 KCNV2Q8TDN2 545 aa9.15□□□□□ -0.94
SMAD4-207ENST00000589076 PDZRN3Q9UPQ7 1066 aa9.15□□□□□ -0.94
SMAD4-207ENST00000589076 FCHSD2O94868 740 aa9.13□□□□□ -0.95
SMAD4-207ENST00000589076 RSPH4AQ5TD94 716 aa9.13□□□□□ -0.95
SMAD4-207ENST00000589076 TMEM134Q9H6X4 195 aa9.12□□□□□ -0.95
SMAD4-207ENST00000589076 ADGRG1Q9Y653 693 aa9.11□□□□□ -0.95
SMAD4-207ENST00000589076 BLOC1S3Q6QNY0 202 aa9.1□□□□□ -0.95
SMAD4-207ENST00000589076 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.09□□□□□ -0.95
SMAD4-207ENST00000589076 RCCD1A6NED2 376 aa9.09□□□□□ -0.95
SMAD4-207ENST00000589076 ACTN4O43707 911 aaKnown RBP9.09□□□□□ -0.95
SMAD4-207ENST00000589076 OATP04181 439 aa9.09□□□□□ -0.95
SMAD4-207ENST00000589076 NR1I2O75469 434 aa9.08□□□□□ -0.96
SMAD4-207ENST00000589076 CFHP08603 1231 aa9.08□□□□□ -0.96
SMAD4-207ENST00000589076 SLC19A1P41440 591 aa9.08□□□□□ -0.96
SMAD4-207ENST00000589076 SMYD5Q6GMV2 418 aa9.08□□□□□ -0.96
SMAD4-207ENST00000589076 RNF223E7ERA6 249 aa9.06□□□□□ -0.96
SMAD4-207ENST00000589076 ANKLE1Q8NAG6 615 aa9.05□□□□□ -0.96
SMAD4-207ENST00000589076 HIC1Q14526 733 aa9.03□□□□□ -0.96
SMAD4-207ENST00000589076 ZNF787Q6DD87 383 aa9.03□□□□□ -0.96
SMAD4-207ENST00000589076 SEMA3EO15041 775 aa9.02□□□□□ -0.97
SMAD4-207ENST00000589076 TLL1O43897 1013 aa9.02□□□□□ -0.97
SMAD4-207ENST00000589076 S1PR4O95977 384 aa9.02□□□□□ -0.97
SMAD4-207ENST00000589076 ADH1BP00325 375 aa9.02□□□□□ -0.97
SMAD4-207ENST00000589076 FAM161AQ3B820 660 aa9.02□□□□□ -0.97
SMAD4-207ENST00000589076 PKDCCQ504Y2 493 aa9.02□□□□□ -0.97
SMAD4-207ENST00000589076 SPRYD7Q5W111 196 aa9.01□□□□□ -0.97
SMAD4-207ENST00000589076 ZNF598Q86UK7 904 aaKnown RBP9.01□□□□□ -0.97
SMAD4-207ENST00000589076 LCE2BO14633 110 aa9□□□□□ -0.97
SMAD4-207ENST00000589076 PXYLP1Q8TE99 480 aa9□□□□□ -0.97
SMAD4-207ENST00000589076 SLC6A16Q9GZN6 736 aa9□□□□□ -0.97
SMAD4-207ENST00000589076 DGAT1O75907 488 aa8.98□□□□□ -0.97
SMAD4-207ENST00000589076 SLC10A3P09131 477 aa8.98□□□□□ -0.97
SMAD4-207ENST00000589076 ZNF697Q5TEC3 545 aa8.98□□□□□ -0.97
SMAD4-207ENST00000589076 PRR20EP86478 221 aa8.97□□□□□ -0.97
SMAD4-207ENST00000589076 PRR20CP86479 221 aa8.97□□□□□ -0.97
SMAD4-207ENST00000589076 PRR20DP86480 221 aa8.97□□□□□ -0.97
SMAD4-207ENST00000589076 PRR20BP86481 221 aa8.97□□□□□ -0.97
SMAD4-207ENST00000589076 PRR20AP86496 221 aa8.97□□□□□ -0.97
SMAD4-207ENST00000589076 METTL3Q86U44 580 aaKnown RBP8.97□□□□□ -0.97
SMAD4-207ENST00000589076 RDH13Q8NBN7 331 aa8.97□□□□□ -0.97
SMAD4-207ENST00000589076 PPEF1O14829 653 aaPredicted RBP8.96□□□□□ -0.98
SMAD4-207ENST00000589076 SCUBE3Q8IX30 993 aa8.96□□□□□ -0.98
SMAD4-207ENST00000589076 SPSB2Q99619 263 aa8.96□□□□□ -0.98
SMAD4-207ENST00000589076 GNPATO15228 680 aa8.95□□□□□ -0.98
SMAD4-207ENST00000589076 SULF1Q8IWU6 871 aa8.94□□□□□ -0.98
SMAD4-207ENST00000589076 DAXXQ9UER7 740 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-207ENST00000589076 TESPA1A2RU30 521 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-207ENST00000589076 RBM26Q5T8P6 1007 aaKnown RBP8.93□□□□□ -0.98
SMAD4-207ENST00000589076 LIAT1Q6ZQX7 453 aa8.93□□□□□ -0.98
SMAD4-207ENST00000589076 TRIM67Q6ZTA4 783 aa8.93□□□□□ -0.98
SMAD4-207ENST00000589076 FAM187AA6NFU0 413 aa8.92□□□□□ -0.98
SMAD4-207ENST00000589076 PUS10Q3MIT2 529 aaKnown RBP8.92□□□□□ -0.98
SMAD4-207ENST00000589076 DDX11L8A8MPP1 907 aa8.91□□□□□ -0.98
SMAD4-207ENST00000589076 TNFRSF10AO00220 468 aa8.91□□□□□ -0.98
SMAD4-207ENST00000589076 LMOD2Q6P5Q4 547 aa8.91□□□□□ -0.98
SMAD4-207ENST00000589076 CD2BP2O95400 341 aaKnown RBP8.9□□□□□ -0.98
SMAD4-207ENST00000589076 FMNL1O95466 1100 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-207ENST00000589076 ATP6V1AP38606 617 aa8.9□□□□□ -0.98
SMAD4-207ENST00000589076 MYT1Q01538 1121 aa8.9□□□□□ -0.98
SMAD4-207ENST00000589076 GRIPAP1Q4V328 841 aa8.9□□□□□ -0.98
SMAD4-207ENST00000589076 EMID1Q96A84 441 aaPredicted RBP8.9□□□□□ -0.98
SMAD4-207ENST00000589076 GDF9O60383 454 aa8.88□□□□□ -0.99
SMAD4-207ENST00000589076 RPIAP49247 311 aa8.88□□□□□ -0.99
SMAD4-207ENST00000589076 PLCB2Q00722 1185 aa8.88□□□□□ -0.99
SMAD4-207ENST00000589076 TULP1O00294 542 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-207ENST00000589076 ZBTB24O43167 697 aaPredicted RBP8.87□□□□□ -0.99
SMAD4-207ENST00000589076 FUT2Q10981 343 aa8.87□□□□□ -0.99
SMAD4-207ENST00000589076 FOXC1Q12948 553 aa8.87□□□□□ -0.99
SMAD4-207ENST00000589076 MORN1Q5T089 497 aa8.86□□□□□ -0.99
SMAD4-207ENST00000589076 GCGRP47871 477 aa8.85□□□□□ -0.99
SMAD4-207ENST00000589076 GPIHBP1Q8IV16 184 aa8.85□□□□□ -0.99
SMAD4-207ENST00000589076 ZNF775Q96BV0 537 aaPredicted RBP8.85□□□□□ -0.99
SMAD4-207ENST00000589076 FECHP22830 423 aa8.84□□□□□ -0.99
SMAD4-207ENST00000589076 PLA2G2CQ5R387 149 aa8.84□□□□□ -0.99
SMAD4-207ENST00000589076 FCF1Q9Y324 198 aaKnown RBP8.84□□□□□ -0.99
SMAD4-207ENST00000589076 SALL2Q9Y467 1007 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-207ENST00000589076 CYP4X1Q8N118 509 aa8.83□□□□□ -1
SMAD4-207ENST00000589076 SLC27A5Q9Y2P5 690 aa8.83□□□□□ -1
SMAD4-207ENST00000589076 Q3C1V9 767 aa8.82□□□□□ -1
SMAD4-207ENST00000589076 THAP11Q96EK4 314 aa8.81□□□□□ -1
SMAD4-207ENST00000589076 GPR37O15354 613 aa8.79□□□□□ -1
SMAD4-207ENST00000589076 HAP1P54257 671 aaPredicted RBP8.79□□□□□ -1
SMAD4-207ENST00000589076 MSS51Q4VC12 460 aa8.79□□□□□ -1
SMAD4-207ENST00000589076 BRICD5Q6PL45 260 aa8.79□□□□□ -1
SMAD4-207ENST00000589076 NLRP7Q8WX94 980 aa8.79□□□□□ -1
SMAD4-207ENST00000589076 AAASQ9NRG9 546 aa8.79□□□□□ -1
SMAD4-207ENST00000589076 PKD2L1Q9P0L9 805 aa8.79□□□□□ -1
SMAD4-207ENST00000589076 TTC24A2A3L6 582 aaPredicted RBP8.78□□□□□ -1
SMAD4-207ENST00000589076 FAM160A2Q8N612 972 aaPredicted RBP8.78□□□□□ -1
SMAD4-207ENST00000589076 ST8SIA5O15466 376 aa8.77□□□□□ -1.01
SMAD4-207ENST00000589076 CTC1Q2NKJ3 1217 aa8.77□□□□□ -1.01
SMAD4-207ENST00000589076 AXIN1O15169 862 aa8.76□□□□□ -1.01
SMAD4-207ENST00000589076 CRIPAKQ8N1N5 446 aa8.76□□□□□ -1.01
SMAD4-207ENST00000589076 TOR4AQ9NXH8 423 aa8.75□□□□□ -1.01
SMAD4-207ENST00000589076 POTECB2RU33 542 aa8.74□□□□□ -1.01
SMAD4-207ENST00000589076 MAP2K5Q13163 448 aa8.74□□□□□ -1.01
SMAD4-207ENST00000589076 PHOX2BQ99453 314 aa8.74□□□□□ -1.01
SMAD4-207ENST00000589076 PRDM9Q9NQV7 894 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms