RNA–Protein interactions for RNA: ENST00000588879.5

RANBP3-215, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-215ENST00000588879 TRIM52Q96A61 297 aa27.67■■■□□ 2.02
RANBP3-215ENST00000588879 CHGAP10645 457 aaKnown RBP27.66■■■□□ 2.02
RANBP3-215ENST00000588879 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.66■■■□□ 2.02
RANBP3-215ENST00000588879 CLTCL1P53675 1640 aa27.63■■■□□ 2.01
RANBP3-215ENST00000588879 SLC26A8Q96RN1 970 aa27.62■■■□□ 2.01
RANBP3-215ENST00000588879 SLC4A1APQ9BWU0 796 aaKnown RBP27.61■■■□□ 2.01
RANBP3-215ENST00000588879 PPP1R15AO75807 674 aaPredicted RBP27.6■■■□□ 2.01
RANBP3-215ENST00000588879 KCNA6P17658 529 aa27.6■■■□□ 2.01
RANBP3-215ENST00000588879 NWD1Q149M9 1564 aa27.6■■■□□ 2.01
RANBP3-215ENST00000588879 TOM1O60784 492 aa27.58■■■□□ 2.01
RANBP3-215ENST00000588879 ALKQ9UM73 1620 aa27.58■■■□□ 2.01
RANBP3-215ENST00000588879 ACIN1Q9UKV3 1341 aaKnown RBP27.58■■■□□ 2.01
RANBP3-215ENST00000588879 XIRP1Q702N8 1843 aaKnown RBP27.57■■■□□ 2
RANBP3-215ENST00000588879 TBX22Q9Y458 520 aa27.56■■■□□ 2
RANBP3-215ENST00000588879 DIP2AQ14689 1571 aa27.56■■■□□ 2
RANBP3-215ENST00000588879 BCANQ96GW7 911 aa27.55■■■□□ 2
RANBP3-215ENST00000588879 ADAMTS13Q76LX8 1427 aa27.55■■■□□ 2
RANBP3-215ENST00000588879 SETD5Q9C0A6 1442 aa27.55■■■□□ 2
RANBP3-215ENST00000588879 KIF1BO60333 1816 aa27.55■■■□□ 2
RANBP3-215ENST00000588879 CHD2O14647 1828 aaKnown RBP27.54■■■□□ 2
RANBP3-215ENST00000588879 NKTRP30414 1462 aaKnown RBP27.54■■■□□ 2
RANBP3-215ENST00000588879 NUTM2DQ5VT03 806 aaPredicted RBP27.52■■■□□ 2
RANBP3-215ENST00000588879 MPHOSPH9Q99550 1183 aa27.5■■□□□ 1.99
RANBP3-215ENST00000588879 NEXMIFQ5QGS0 1516 aa27.5■■□□□ 1.99
RANBP3-215ENST00000588879 PIK3R4Q99570 1358 aa27.49■■□□□ 1.99
RANBP3-215ENST00000588879 SETBP1Q9Y6X0 1596 aa27.49■■□□□ 1.99
RANBP3-215ENST00000588879 ZNF326Q5BKZ1 582 aaKnown RBP27.48■■□□□ 1.99
RANBP3-215ENST00000588879 NRXN3Q9Y4C0 1643 aa27.48■■□□□ 1.99
RANBP3-215ENST00000588879 TMEM94Q12767 1356 aa27.48■■□□□ 1.99
RANBP3-215ENST00000588879 SENP3Q9H4L4 574 aaPredicted RBP27.46■■□□□ 1.99
RANBP3-215ENST00000588879 PROSER2Q86WR7 435 aaPredicted RBP27.45■■□□□ 1.98
RANBP3-215ENST00000588879 PIP4K2BP78356 416 aa27.44■■□□□ 1.98
RANBP3-215ENST00000588879 FOXD1Q16676 465 aa27.44■■□□□ 1.98
RANBP3-215ENST00000588879 RAB3GAP2Q9H2M9 1393 aa27.44■■□□□ 1.98
RANBP3-215ENST00000588879 RPGRIP1LQ68CZ1 1315 aa27.41■■□□□ 1.98
RANBP3-215ENST00000588879 SCAF1Q9H7N4 1312 aaKnown RBP27.4■■□□□ 1.98
RANBP3-215ENST00000588879 CCDC144AA2RUR9 1427 aa27.39■■□□□ 1.97
RANBP3-215ENST00000588879 NCOA3Q9Y6Q9 1424 aa27.39■■□□□ 1.97
RANBP3-215ENST00000588879 PTPRUQ92729 1446 aa27.37■■□□□ 1.97
RANBP3-215ENST00000588879 PPLO60437 1756 aa27.36■■□□□ 1.97
RANBP3-215ENST00000588879 HRCP23327 699 aa27.36■■□□□ 1.97
RANBP3-215ENST00000588879 HSPA1LP34931 641 aa27.36■■□□□ 1.97
RANBP3-215ENST00000588879 VGFO15240 615 aaPredicted RBP27.35■■□□□ 1.97
RANBP3-215ENST00000588879 SPATA31E1Q6ZUB1 1445 aa27.34■■□□□ 1.97
RANBP3-215ENST00000588879 XRN1Q8IZH2 1706 aaKnown RBP27.34■■□□□ 1.97
RANBP3-215ENST00000588879 RBM33Q96EV2 1170 aaKnown RBP27.34■■□□□ 1.97
RANBP3-215ENST00000588879 AMOTL2Q9Y2J4 779 aa27.32■■□□□ 1.96
RANBP3-215ENST00000588879 METP08581 1390 aa27.32■■□□□ 1.96
RANBP3-215ENST00000588879 MSH6P52701 1360 aa27.32■■□□□ 1.96
RANBP3-215ENST00000588879 FAM135BQ49AJ0 1406 aa27.31■■□□□ 1.96
RANBP3-215ENST00000588879 SETD1AO15047 1707 aaKnown RBP27.3■■□□□ 1.96
RANBP3-215ENST00000588879 IFT172Q9UG01 1749 aa27.27■■□□□ 1.96
RANBP3-215ENST00000588879 ANKRD30BQ9BXX2 1392 aa27.23■■□□□ 1.95
RANBP3-215ENST00000588879 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.23■■□□□ 1.95
RANBP3-215ENST00000588879 ROBO1Q9Y6N7 1651 aa27.22■■□□□ 1.95
RANBP3-215ENST00000588879 C19orf44Q9H6X5 657 aa27.22■■□□□ 1.95
RANBP3-215ENST00000588879 PRAG1Q86YV5 1406 aa27.22■■□□□ 1.95
RANBP3-215ENST00000588879 RGL3Q3MIN7 710 aa27.21■■□□□ 1.95
RANBP3-215ENST00000588879 SLAIN2Q9P270 581 aa27.21■■□□□ 1.95
RANBP3-215ENST00000588879 ADGRF5Q8IZF2 1346 aa27.18■■□□□ 1.94
RANBP3-215ENST00000588879 DCCP43146 1447 aa27.18■■□□□ 1.94
RANBP3-215ENST00000588879 C14orf37Q86TY3 774 aa27.18■■□□□ 1.94
RANBP3-215ENST00000588879 DISP3Q9P2K9 1392 aa27.18■■□□□ 1.94
RANBP3-215ENST00000588879 PTCH1Q13635 1447 aa27.17■■□□□ 1.94
RANBP3-215ENST00000588879 CADPS2Q86UW7 1296 aa27.17■■□□□ 1.94
RANBP3-215ENST00000588879 PIK3C2GO75747 1445 aa27.14■■□□□ 1.93
RANBP3-215ENST00000588879 ATF3P18847 181 aa27.13■■□□□ 1.93
RANBP3-215ENST00000588879 ADGRL3Q9HAR2 1447 aa27.12■■□□□ 1.93
RANBP3-215ENST00000588879 MYOM2P54296 1465 aa27.12■■□□□ 1.93
RANBP3-215ENST00000588879 NRXN1Q9ULB1 1477 aa27.12■■□□□ 1.93
RANBP3-215ENST00000588879 MED1Q15648 1581 aaPredicted RBP27.11■■□□□ 1.93
RANBP3-215ENST00000588879 NALCNQ8IZF0 1738 aa27.1■■□□□ 1.93
RANBP3-215ENST00000588879 ROBO2Q9HCK4 1378 aa27.09■■□□□ 1.93
RANBP3-215ENST00000588879 TECPR2O15040 1411 aa27.06■■□□□ 1.92
RANBP3-215ENST00000588879 ASXL1Q8IXJ9 1541 aa27.06■■□□□ 1.92
RANBP3-215ENST00000588879 MST1RQ04912 1400 aa27.05■■□□□ 1.92
RANBP3-215ENST00000588879 PHLPP1O60346 1717 aa27.04■■□□□ 1.92
RANBP3-215ENST00000588879 LAMC1P11047 1609 aa27.03■■□□□ 1.92
RANBP3-215ENST00000588879 LRPPRCP42704 1394 aaKnown RBP27.03■■□□□ 1.92
RANBP3-215ENST00000588879 AHDC1Q5TGY3 1603 aaPredicted RBP27.03■■□□□ 1.92
RANBP3-215ENST00000588879 C14orf93Q9H972 538 aaKnown RBP27.03■■□□□ 1.92
RANBP3-215ENST00000588879 KNDC1Q76NI1 1749 aa27.02■■□□□ 1.92
RANBP3-215ENST00000588879 ABCC11Q96J66 1382 aa27.01■■□□□ 1.91
RANBP3-215ENST00000588879 COL16A1Q07092 1604 aaPredicted RBP27.01■■□□□ 1.91
RANBP3-215ENST00000588879 BRINP3Q76B58 766 aa26.99■■□□□ 1.91
RANBP3-215ENST00000588879 STAC3Q96MF2 364 aa26.98■■□□□ 1.91
RANBP3-215ENST00000588879 TMEM132EQ6IEE7 984 aa26.97■■□□□ 1.91
RANBP3-215ENST00000588879 YTHDC2Q9H6S0 1430 aaKnown RBP26.97■■□□□ 1.91
RANBP3-215ENST00000588879 ILDR2Q71H61 639 aa26.95■■□□□ 1.9
RANBP3-215ENST00000588879 CFAP70Q5T0N1 1121 aa26.94■■□□□ 1.9
RANBP3-215ENST00000588879 SIRT1Q96EB6 747 aa26.94■■□□□ 1.9
RANBP3-215ENST00000588879 JCADQ9P266 1359 aa26.94■■□□□ 1.9
RANBP3-215ENST00000588879 CDC42BPGQ6DT37 1551 aa26.93■■□□□ 1.9
RANBP3-215ENST00000588879 STK26Q9P289 416 aa26.93■■□□□ 1.9
RANBP3-215ENST00000588879 NHSL1Q5SYE7 1610 aa26.93■■□□□ 1.9
RANBP3-215ENST00000588879 DHX57Q6P158 1386 aaKnown RBP26.93■■□□□ 1.9
RANBP3-215ENST00000588879 C1orf167Q5SNV9 1468 aa26.93■■□□□ 1.9
RANBP3-215ENST00000588879 DCAF11Q8TEB1 546 aa26.91■■□□□ 1.9
RANBP3-215ENST00000588879 ADGRB1O14514 1584 aa26.89■■□□□ 1.9
RANBP3-215ENST00000588879 WAPLQ7Z5K2 1190 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms