RNA–Protein interactions for RNA: ENST00000588516.5

NEDD4L-223, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-223ENST00000588516 PPP4R2Q9NY27 417 aa19.06■□□□□ 0.64
NEDD4L-223ENST00000588516 FAM135AQ9P2D6 1515 aa19.06■□□□□ 0.64
NEDD4L-223ENST00000588516 HNRNPMP52272 730 aaKnown RBP eCLIP19.05■□□□□ 0.647e-7■■■■□ 23.1
NEDD4L-223ENST00000588516 FAM9BQ8IZU0 186 aa19.04■□□□□ 0.64
NEDD4L-223ENST00000588516 ANKLE2Q86XL3 938 aa19.03■□□□□ 0.64
NEDD4L-223ENST00000588516 DHX29Q7Z478 1369 aaKnown RBP19.03■□□□□ 0.64
NEDD4L-223ENST00000588516 CCDC144AA2RUR9 1427 aa19.03■□□□□ 0.64
NEDD4L-223ENST00000588516 LAMC1P11047 1609 aa19.03■□□□□ 0.64
NEDD4L-223ENST00000588516 RALBP1Q15311 655 aa19.02■□□□□ 0.64
NEDD4L-223ENST00000588516 ZNF326Q5BKZ1 582 aaKnown RBP19.02■□□□□ 0.64
NEDD4L-223ENST00000588516 RGS17Q9UGC6 210 aaPredicted RBP19.02■□□□□ 0.64
NEDD4L-223ENST00000588516 A2MP01023 1474 aa19.02■□□□□ 0.64
NEDD4L-223ENST00000588516 DUOX2Q9NRD8 1548 aa19.02■□□□□ 0.64
NEDD4L-223ENST00000588516 EIF2AK4Q9P2K8 1649 aaKnown RBP19.01■□□□□ 0.63
NEDD4L-223ENST00000588516 IQGAP3Q86VI3 1631 aa19■□□□□ 0.63
NEDD4L-223ENST00000588516 ERBINQ96RT1 1412 aa18.99■□□□□ 0.63
NEDD4L-223ENST00000588516 SYCP2Q9BX26 1530 aa18.99■□□□□ 0.63
NEDD4L-223ENST00000588516 STAC3Q96MF2 364 aa18.99■□□□□ 0.63
NEDD4L-223ENST00000588516 SMG6Q86US8 1419 aaKnown RBP18.98■□□□□ 0.63
NEDD4L-223ENST00000588516 NEURL4Q96JN8 1562 aa18.98■□□□□ 0.63
NEDD4L-223ENST00000588516 ATP7AQ04656 1500 aa18.98■□□□□ 0.63
NEDD4L-223ENST00000588516 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
NEDD4L-223ENST00000588516 ALKQ9UM73 1620 aa18.97■□□□□ 0.63
NEDD4L-223ENST00000588516 WASHC2CQ9Y4E1 1318 aa18.97■□□□□ 0.63
NEDD4L-223ENST00000588516 BRD4O60885 1362 aaPredicted RBP18.97■□□□□ 0.63
NEDD4L-223ENST00000588516 TNRQ92752 1358 aa18.97■□□□□ 0.63
NEDD4L-223ENST00000588516 FBXO31Q5XUX0 539 aaPredicted RBP18.97■□□□□ 0.63
NEDD4L-223ENST00000588516 THEMISQ8N1K5 641 aaPredicted RBP18.96■□□□□ 0.63
NEDD4L-223ENST00000588516 VWDEQ8N2E2 1590 aa18.95■□□□□ 0.62
NEDD4L-223ENST00000588516 TMC1Q8TDI8 760 aa18.95■□□□□ 0.62
NEDD4L-223ENST00000588516 GPRASP1Q5JY77 1395 aa18.94■□□□□ 0.62
NEDD4L-223ENST00000588516 TRPM1Q7Z4N2 1603 aa18.94■□□□□ 0.62
NEDD4L-223ENST00000588516 NPHP4O75161 1426 aaPredicted RBP18.94■□□□□ 0.62
NEDD4L-223ENST00000588516 CCDC184Q52MB2 194 aa18.94■□□□□ 0.62
NEDD4L-223ENST00000588516 PRAG1Q86YV5 1406 aa18.93■□□□□ 0.62
NEDD4L-223ENST00000588516 MYBBP1AQ9BQG0 1328 aaKnown RBP18.93■□□□□ 0.62
NEDD4L-223ENST00000588516 E9PCH4 1651 aa18.92■□□□□ 0.62
NEDD4L-223ENST00000588516 POTEAQ6S8J7 498 aa18.92■□□□□ 0.62
NEDD4L-223ENST00000588516 POLR3GLQ9BT43 218 aa18.92■□□□□ 0.62
NEDD4L-223ENST00000588516 RBM19Q9Y4C8 960 aaKnown RBP18.92■□□□□ 0.62
NEDD4L-223ENST00000588516 NUDCQ9Y266 331 aa18.91■□□□□ 0.62
NEDD4L-223ENST00000588516 KDM2AQ9Y2K7 1162 aa18.91■□□□□ 0.62
NEDD4L-223ENST00000588516 INSRP06213 1382 aa18.91■□□□□ 0.62
NEDD4L-223ENST00000588516 ST20-MTHFSA0A0A6YYL1 179 aa18.9■□□□□ 0.62
NEDD4L-223ENST00000588516 ANP32EQ9BTT0 268 aa18.9■□□□□ 0.62
NEDD4L-223ENST00000588516 INO80Q9ULG1 1556 aaPredicted RBP18.89■□□□□ 0.61
NEDD4L-223ENST00000588516 RTEL1-TNFRSF6BF6WH68 1400 aa18.89■□□□□ 0.61
NEDD4L-223ENST00000588516 LRRC7Q96NW7 1537 aa18.88■□□□□ 0.61
NEDD4L-223ENST00000588516 PNISRQ8TF01 805 aaKnown RBP18.88■□□□□ 0.61
NEDD4L-223ENST00000588516 KIF3BO15066 747 aa18.86■□□□□ 0.61
NEDD4L-223ENST00000588516 SLC24A1O60721 1099 aa18.86■□□□□ 0.61
NEDD4L-223ENST00000588516 MED14O60244 1454 aa18.86■□□□□ 0.61
NEDD4L-223ENST00000588516 RNF17Q9BXT8 1623 aaKnown RBP18.85■□□□□ 0.61
NEDD4L-223ENST00000588516 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
NEDD4L-223ENST00000588516 UGGT1Q9NYU2 1555 aa18.85■□□□□ 0.61
NEDD4L-223ENST00000588516 PDE3BQ13370 1112 aa18.85■□□□□ 0.61
NEDD4L-223ENST00000588516 PRDM15P57071 1507 aaPredicted RBP18.85■□□□□ 0.61
NEDD4L-223ENST00000588516 LRPPRCP42704 1394 aaKnown RBP18.85■□□□□ 0.61
NEDD4L-223ENST00000588516 NLRP13Q86W25 1043 aa18.84■□□□□ 0.61
NEDD4L-223ENST00000588516 RNF123Q5XPI4 1314 aa18.83■□□□□ 0.61
NEDD4L-223ENST00000588516 DEPDC5O75140 1603 aa18.83■□□□□ 0.6
NEDD4L-223ENST00000588516 IQGAP1P46940 1657 aa18.82■□□□□ 0.6
NEDD4L-223ENST00000588516 NLRP1Q9C000 1473 aa18.82■□□□□ 0.6
NEDD4L-223ENST00000588516 CDCA8Q53HL2 280 aa18.82■□□□□ 0.6
NEDD4L-223ENST00000588516 TMF1P82094 1093 aa18.81■□□□□ 0.6
NEDD4L-223ENST00000588516 STRCP1A6NGW2 1772 aa18.81■□□□□ 0.6
NEDD4L-223ENST00000588516 MSH5O43196 834 aa18.8■□□□□ 0.6
NEDD4L-223ENST00000588516 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.8■□□□□ 0.61e-8■■■■■ 27.4
NEDD4L-223ENST00000588516 KANK1Q14678 1352 aa18.79■□□□□ 0.6
NEDD4L-223ENST00000588516 PARD3Q8TEW0 1356 aa18.79■□□□□ 0.6
NEDD4L-223ENST00000588516 SYNMO15061 1565 aa18.79■□□□□ 0.6
NEDD4L-223ENST00000588516 IRX6P78412 446 aaPredicted RBP18.77■□□□□ 0.6
NEDD4L-223ENST00000588516 TRPM2O94759 1503 aa18.75■□□□□ 0.59
NEDD4L-223ENST00000588516 RGL3Q3MIN7 710 aa18.74■□□□□ 0.59
NEDD4L-223ENST00000588516 FAM135BQ49AJ0 1406 aa18.73■□□□□ 0.59
NEDD4L-223ENST00000588516 SETD1AO15047 1707 aaKnown RBP18.73■□□□□ 0.59
NEDD4L-223ENST00000588516 CEP152O94986 1710 aa18.73■□□□□ 0.59
NEDD4L-223ENST00000588516 TET3O43151 1660 aa18.72■□□□□ 0.59
NEDD4L-223ENST00000588516 KIAA1210Q9ULL0 1709 aa18.71■□□□□ 0.59
NEDD4L-223ENST00000588516 EIF3AQ14152 1382 aaKnown RBP18.71■□□□□ 0.59
NEDD4L-223ENST00000588516 SPHKAPQ2M3C7 1700 aa18.71■□□□□ 0.59
NEDD4L-223ENST00000588516 PER1O15534 1290 aaPredicted RBP18.7■□□□□ 0.58
NEDD4L-223ENST00000588516 TESK2Q96S53 571 aa18.7■□□□□ 0.58
NEDD4L-223ENST00000588516 ERICH6Q7L0X2 663 aa18.69■□□□□ 0.58
NEDD4L-223ENST00000588516 TXNDC2Q86VQ3 553 aa18.69■□□□□ 0.58
NEDD4L-223ENST00000588516 UPF1Q92900 1129 aaKnown RBP eCLIP18.69■□□□□ 0.58
NEDD4L-223ENST00000588516 CCDC136Q96JN2 1154 aa18.69■□□□□ 0.58
NEDD4L-223ENST00000588516 NBPF1Q3BBV0 1214 aa18.68■□□□□ 0.58
NEDD4L-223ENST00000588516 SCAF11Q99590 1463 aaKnown RBP18.67■□□□□ 0.58
NEDD4L-223ENST00000588516 LTKP29376 864 aa18.66■□□□□ 0.58
NEDD4L-223ENST00000588516 B4GALNT3Q6L9W6 998 aa18.66■□□□□ 0.58
NEDD4L-223ENST00000588516 ZC3H13Q5T200 1668 aaKnown RBP18.65■□□□□ 0.58
NEDD4L-223ENST00000588516 CNGB1Q14028 1251 aaPredicted RBP18.64■□□□□ 0.57
NEDD4L-223ENST00000588516 EID1Q9Y6B2 187 aa18.64■□□□□ 0.57
NEDD4L-223ENST00000588516 TMEM94Q12767 1356 aa18.63■□□□□ 0.57
NEDD4L-223ENST00000588516 PANK3Q9H999 370 aa18.63■□□□□ 0.57
NEDD4L-223ENST00000588516 BLMP54132 1417 aaPredicted RBP18.62■□□□□ 0.57
NEDD4L-223ENST00000588516 NPC1L1Q9UHC9 1359 aa18.62■□□□□ 0.57
NEDD4L-223ENST00000588516 XIRP1Q702N8 1843 aaKnown RBP18.62■□□□□ 0.57
NEDD4L-223ENST00000588516 KNSTRNQ9Y448 316 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms