RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 CFAP65Q6ZU64 1925 aaKnown RBP13.13□□□□□ -0.31
CIRBP-218ENST00000588344 SPATA31E1Q6ZUB1 1445 aa13.13□□□□□ -0.31
CIRBP-218ENST00000588344 RIMS2Q9UQ26 1411 aa13.13□□□□□ -0.31
CIRBP-218ENST00000588344 SCAF11Q99590 1463 aaKnown RBP13.12□□□□□ -0.31
CIRBP-218ENST00000588344 TMEM131LA2VDJ0 1609 aa13.12□□□□□ -0.31
CIRBP-218ENST00000588344 CLTCL1P53675 1640 aa13.12□□□□□ -0.31
CIRBP-218ENST00000588344 MED14O60244 1454 aa13.11□□□□□ -0.31
CIRBP-218ENST00000588344 BCANQ96GW7 911 aa13.11□□□□□ -0.31
CIRBP-218ENST00000588344 ZFYVE9O95405 1425 aa13.11□□□□□ -0.31
CIRBP-218ENST00000588344 UBR1Q8IWV7 1749 aa13.1□□□□□ -0.31
CIRBP-218ENST00000588344 NEUROD1Q13562 356 aa13.1□□□□□ -0.31
CIRBP-218ENST00000588344 TIMELESSQ9UNS1 1208 aa13.1□□□□□ -0.31
CIRBP-218ENST00000588344 PLEKHG1Q9ULL1 1385 aa13.09□□□□□ -0.31
CIRBP-218ENST00000588344 NPHP4O75161 1426 aaPredicted RBP13.09□□□□□ -0.31
CIRBP-218ENST00000588344 SIN3AQ96ST3 1273 aa13.09□□□□□ -0.31
CIRBP-218ENST00000588344 TBX22Q9Y458 520 aa13.09□□□□□ -0.31
CIRBP-218ENST00000588344 DCAF11Q8TEB1 546 aa13.08□□□□□ -0.32
CIRBP-218ENST00000588344 NUTM2DQ5VT03 806 aaPredicted RBP13.06□□□□□ -0.32
CIRBP-218ENST00000588344 KIF1BO60333 1816 aa13.05□□□□□ -0.32
CIRBP-218ENST00000588344 L3MBTL2Q969R5 705 aa13.04□□□□□ -0.32
CIRBP-218ENST00000588344 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
CIRBP-218ENST00000588344 TONSLQ96HA7 1378 aa13.04□□□□□ -0.32
CIRBP-218ENST00000588344 PIK3R4Q99570 1358 aa13.04□□□□□ -0.32
CIRBP-218ENST00000588344 KDM2AQ9Y2K7 1162 aa13.03□□□□□ -0.32
CIRBP-218ENST00000588344 ADGRF5Q8IZF2 1346 aa13.03□□□□□ -0.32
CIRBP-218ENST00000588344 NEXMIFQ5QGS0 1516 aa13.03□□□□□ -0.32
CIRBP-218ENST00000588344 C14orf93Q9H972 538 aaKnown RBP13.02□□□□□ -0.33
CIRBP-218ENST00000588344 KCNA6P17658 529 aa13.01□□□□□ -0.33
CIRBP-218ENST00000588344 MYOM2P54296 1465 aa13.01□□□□□ -0.33
CIRBP-218ENST00000588344 STRCQ7RTU9 1775 aa13.01□□□□□ -0.33
CIRBP-218ENST00000588344 ADAMTS13Q76LX8 1427 aa12.99□□□□□ -0.33
CIRBP-218ENST00000588344 SETBP1Q9Y6X0 1596 aa12.98□□□□□ -0.33
CIRBP-218ENST00000588344 PIK3C2GO75747 1445 aa12.98□□□□□ -0.33
CIRBP-218ENST00000588344 NRXN1Q9ULB1 1477 aa12.97□□□□□ -0.33
CIRBP-218ENST00000588344 POLR1AO95602 1720 aaPredicted RBP12.97□□□□□ -0.33
CIRBP-218ENST00000588344 IQGAP1P46940 1657 aa12.97□□□□□ -0.33
CIRBP-218ENST00000588344 AMOTL2Q9Y2J4 779 aa12.97□□□□□ -0.33
CIRBP-218ENST00000588344 DIP2AQ14689 1571 aa12.97□□□□□ -0.33
CIRBP-218ENST00000588344 ZNF335Q9H4Z2 1342 aaPredicted RBP12.96□□□□□ -0.33
CIRBP-218ENST00000588344 CFAP70Q5T0N1 1121 aa12.96□□□□□ -0.33
CIRBP-218ENST00000588344 SENP3Q9H4L4 574 aaPredicted RBP12.96□□□□□ -0.33
CIRBP-218ENST00000588344 SIRT1Q96EB6 747 aa12.95□□□□□ -0.34
CIRBP-218ENST00000588344 MYO5BQ9ULV0 1848 aa12.95□□□□□ -0.34
CIRBP-218ENST00000588344 METP08581 1390 aa12.94□□□□□ -0.34
CIRBP-218ENST00000588344 PRAG1Q86YV5 1406 aa12.94□□□□□ -0.34
CIRBP-218ENST00000588344 PPLO60437 1756 aa12.94□□□□□ -0.34
CIRBP-218ENST00000588344 ALKQ9UM73 1620 aa12.93□□□□□ -0.34
CIRBP-218ENST00000588344 PROSER2Q86WR7 435 aaPredicted RBP12.93□□□□□ -0.34
CIRBP-218ENST00000588344 ABCC11Q96J66 1382 aa12.93□□□□□ -0.34
CIRBP-218ENST00000588344 TMEM132EQ6IEE7 984 aa12.92□□□□□ -0.34
CIRBP-218ENST00000588344 NCOA3Q9Y6Q9 1424 aa12.92□□□□□ -0.34
CIRBP-218ENST00000588344 CPS1P31327 1500 aa12.92□□□□□ -0.34
CIRBP-218ENST00000588344 LRPPRCP42704 1394 aaKnown RBP12.92□□□□□ -0.34
CIRBP-218ENST00000588344 CERKQ8TCT0 537 aa12.9□□□□□ -0.34
CIRBP-218ENST00000588344 IFT172Q9UG01 1749 aa12.89□□□□□ -0.35
CIRBP-218ENST00000588344 NBPF8Q3BBV2 869 aa12.89□□□□□ -0.35
CIRBP-218ENST00000588344 STK26Q9P289 416 aa12.89□□□□□ -0.35
CIRBP-218ENST00000588344 NKTRP30414 1462 aaKnown RBP12.89□□□□□ -0.35
CIRBP-218ENST00000588344 PTPRUQ92729 1446 aa12.88□□□□□ -0.35
CIRBP-218ENST00000588344 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
CIRBP-218ENST00000588344 NBPF1Q3BBV0 1214 aa12.88□□□□□ -0.35
CIRBP-218ENST00000588344 NRXN3Q9Y4C0 1643 aa12.88□□□□□ -0.35
CIRBP-218ENST00000588344 ROCK2O75116 1388 aaKnown RBP12.87□□□□□ -0.35
CIRBP-218ENST00000588344 C19orf44Q9H6X5 657 aa12.87□□□□□ -0.35
CIRBP-218ENST00000588344 TRAK1Q9UPV9 953 aa12.87□□□□□ -0.35
CIRBP-218ENST00000588344 LAMC1P11047 1609 aa12.87□□□□□ -0.35
CIRBP-218ENST00000588344 LTBP4Q8N2S1 1624 aa12.87□□□□□ -0.35
CIRBP-218ENST00000588344 TECPR2O15040 1411 aa12.87□□□□□ -0.35
CIRBP-218ENST00000588344 PTCH1Q13635 1447 aa12.87□□□□□ -0.35
CIRBP-218ENST00000588344 IQSEC2Q5JU85 1478 aa12.86□□□□□ -0.35
CIRBP-218ENST00000588344 TMEM94Q12767 1356 aa12.86□□□□□ -0.35
CIRBP-218ENST00000588344 SLC24A1O60721 1099 aa12.86□□□□□ -0.35
CIRBP-218ENST00000588344 C14orf37Q86TY3 774 aa12.86□□□□□ -0.35
CIRBP-218ENST00000588344 CARD11Q9BXL7 1154 aa12.86□□□□□ -0.35
CIRBP-218ENST00000588344 POGKQ9P215 609 aa12.86□□□□□ -0.35
CIRBP-218ENST00000588344 FAM135BQ49AJ0 1406 aa12.86□□□□□ -0.35
CIRBP-218ENST00000588344 NWD1Q149M9 1564 aa12.85□□□□□ -0.35
CIRBP-218ENST00000588344 GPRASP1Q5JY77 1395 aa12.84□□□□□ -0.35
CIRBP-218ENST00000588344 LRRC7Q96NW7 1537 aa12.84□□□□□ -0.35
CIRBP-218ENST00000588344 TOM1O60784 492 aa12.84□□□□□ -0.35
CIRBP-218ENST00000588344 ZEB1P37275 1124 aaPredicted RBP12.84□□□□□ -0.35
CIRBP-218ENST00000588344 MSH6P52701 1360 aa12.83□□□□□ -0.36
CIRBP-218ENST00000588344 ROBO2Q9HCK4 1378 aa12.83□□□□□ -0.36
CIRBP-218ENST00000588344 KIAA1210Q9ULL0 1709 aa12.83□□□□□ -0.36
CIRBP-218ENST00000588344 ADGRB1O14514 1584 aa12.83□□□□□ -0.36
CIRBP-218ENST00000588344 ATF3P18847 181 aa12.83□□□□□ -0.36
CIRBP-218ENST00000588344 CADPS2Q86UW7 1296 aa12.83□□□□□ -0.36
CIRBP-218ENST00000588344 PRAM1Q96QH2 718 aa12.83□□□□□ -0.36
CIRBP-218ENST00000588344 EIF3AQ14152 1382 aaKnown RBP12.82□□□□□ -0.36
CIRBP-218ENST00000588344 WAPLQ7Z5K2 1190 aa12.82□□□□□ -0.36
CIRBP-218ENST00000588344 CHD2O14647 1828 aaKnown RBP12.82□□□□□ -0.36
CIRBP-218ENST00000588344 RALGAPBQ86X10 1494 aa12.82□□□□□ -0.36
CIRBP-218ENST00000588344 DLC1Q96QB1 1528 aa12.82□□□□□ -0.36
CIRBP-218ENST00000588344 RBM33Q96EV2 1170 aaKnown RBP12.8□□□□□ -0.36
CIRBP-218ENST00000588344 SETD1AO15047 1707 aaKnown RBP12.79□□□□□ -0.36
CIRBP-218ENST00000588344 ASXL1Q8IXJ9 1541 aa12.79□□□□□ -0.36
CIRBP-218ENST00000588344 CENPJQ9HC77 1338 aaPredicted RBP12.79□□□□□ -0.36
CIRBP-218ENST00000588344 XRN1Q8IZH2 1706 aaKnown RBP12.79□□□□□ -0.36
CIRBP-218ENST00000588344 DCCP43146 1447 aa12.79□□□□□ -0.36
CIRBP-218ENST00000588344 UBAP1LF5GYI3 381 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms