RNA–Protein interactions for RNA: ENST00000588195.5

PCSK4-207, Transcript of proprotein convertase subtilisin/kexin type 4, humanhuman

TSL 2

Gene PCSK4, Length 1,806 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK4-207ENST00000588195 SCAF11Q99590 1463 aaKnown RBP28.17■■■□□ 2.1
PCSK4-207ENST00000588195 SYNMO15061 1565 aa28.17■■■□□ 2.1
PCSK4-207ENST00000588195 DISP3Q9P2K9 1392 aa28.17■■■□□ 2.1
PCSK4-207ENST00000588195 MRS2Q9HD23 443 aa28.11■■■□□ 2.09
PCSK4-207ENST00000588195 ADGRF5Q8IZF2 1346 aa28.11■■■□□ 2.09
PCSK4-207ENST00000588195 PREX1Q8TCU6 1659 aa28.1■■■□□ 2.09
PCSK4-207ENST00000588195 TMF1P82094 1093 aa28.09■■■□□ 2.09
PCSK4-207ENST00000588195 AGLP35573 1532 aa28.08■■■□□ 2.09
PCSK4-207ENST00000588195 SETBP1Q9Y6X0 1596 aa28.06■■■□□ 2.08
PCSK4-207ENST00000588195 EIF3AQ14152 1382 aaKnown RBP28.05■■■□□ 2.08
PCSK4-207ENST00000588195 KTN1Q86UP2 1357 aaKnown RBP28.05■■■□□ 2.08
PCSK4-207ENST00000588195 CHGAP10645 457 aaKnown RBP28.04■■■□□ 2.08
PCSK4-207ENST00000588195 HNRNPUQ00839 825 aaKnown RBP eCLIP28.04■■■□□ 2.08
PCSK4-207ENST00000588195 MYO3AQ8NEV4 1616 aa28.03■■■□□ 2.08
PCSK4-207ENST00000588195 CFAP70Q5T0N1 1121 aa28.03■■■□□ 2.08
PCSK4-207ENST00000588195 ARHGEF40Q8TER5 1519 aa28.03■■■□□ 2.08
PCSK4-207ENST00000588195 PIK3C2GO75747 1445 aa28.02■■■□□ 2.08
PCSK4-207ENST00000588195 RPGRIP1LQ68CZ1 1315 aa28.02■■■□□ 2.08
PCSK4-207ENST00000588195 MYO5BQ9ULV0 1848 aa28.02■■■□□ 2.08
PCSK4-207ENST00000588195 NEXMIFQ5QGS0 1516 aa28■■■□□ 2.07
PCSK4-207ENST00000588195 FAM9BQ8IZU0 186 aa27.98■■■□□ 2.07
PCSK4-207ENST00000588195 KDM5AP29375 1690 aaKnown RBP27.98■■■□□ 2.07
PCSK4-207ENST00000588195 MYOM1P52179 1685 aa27.98■■■□□ 2.07
PCSK4-207ENST00000588195 PER1O15534 1290 aaPredicted RBP27.97■■■□□ 2.07
PCSK4-207ENST00000588195 CNGB1Q14028 1251 aaPredicted RBP27.97■■■□□ 2.07
PCSK4-207ENST00000588195 RALBP1Q15311 655 aa27.97■■■□□ 2.07
PCSK4-207ENST00000588195 CLTCQ00610 1675 aaKnown RBP27.96■■■□□ 2.07
PCSK4-207ENST00000588195 TMEM131LA2VDJ0 1609 aa27.95■■■□□ 2.06
PCSK4-207ENST00000588195 ADGRB1O14514 1584 aa27.94■■■□□ 2.06
PCSK4-207ENST00000588195 PARD3Q8TEW0 1356 aa27.94■■■□□ 2.06
PCSK4-207ENST00000588195 MYBBP1AQ9BQG0 1328 aaKnown RBP27.93■■■□□ 2.06
PCSK4-207ENST00000588195 SLC52A1Q9NWF4 448 aa27.92■■■□□ 2.06
PCSK4-207ENST00000588195 CDCA8Q53HL2 280 aa27.92■■■□□ 2.06
PCSK4-207ENST00000588195 PPP6R1Q9UPN7 881 aa27.92■■■□□ 2.06
PCSK4-207ENST00000588195 ERVK-7P63135 1459 aa27.91■■■□□ 2.06
PCSK4-207ENST00000588195 C14orf93Q9H972 538 aaKnown RBP27.91■■■□□ 2.06
PCSK4-207ENST00000588195 IDI1Q13907 227 aa27.9■■■□□ 2.06
PCSK4-207ENST00000588195 PANK3Q9H999 370 aa27.9■■■□□ 2.06
PCSK4-207ENST00000588195 BRD4O60885 1362 aaPredicted RBP27.9■■■□□ 2.06
PCSK4-207ENST00000588195 SUPT16HQ9Y5B9 1047 aaKnown RBP27.88■■■□□ 2.05
PCSK4-207ENST00000588195 QRICH2Q9H0J4 1663 aa27.88■■■□□ 2.05
PCSK4-207ENST00000588195 SBNO2Q9Y2G9 1366 aa27.87■■■□□ 2.05
PCSK4-207ENST00000588195 ZFYVE9O95405 1425 aa27.86■■■□□ 2.05
PCSK4-207ENST00000588195 SLC24A1O60721 1099 aa27.85■■■□□ 2.05
PCSK4-207ENST00000588195 ZBED9Q6R2W3 1325 aa27.85■■■□□ 2.05
PCSK4-207ENST00000588195 SPATA31D1Q6ZQQ2 1576 aa27.84■■■□□ 2.05
PCSK4-207ENST00000588195 VGFO15240 615 aaPredicted RBP27.83■■■□□ 2.05
PCSK4-207ENST00000588195 TMC1Q8TDI8 760 aa27.83■■■□□ 2.05
PCSK4-207ENST00000588195 ARHGEF28Q8N1W1 1705 aaKnown RBP27.83■■■□□ 2.05
PCSK4-207ENST00000588195 PNISRQ8TF01 805 aaKnown RBP27.83■■■□□ 2.05
PCSK4-207ENST00000588195 FBXO31Q5XUX0 539 aaPredicted RBP27.8■■■□□ 2.04
PCSK4-207ENST00000588195 LRPPRCP42704 1394 aaKnown RBP27.79■■■□□ 2.04
PCSK4-207ENST00000588195 NLRP13Q86W25 1043 aa27.79■■■□□ 2.04
PCSK4-207ENST00000588195 CENPJQ9HC77 1338 aaPredicted RBP27.78■■■□□ 2.04
PCSK4-207ENST00000588195 CC2D1BQ5T0F9 858 aaKnown RBP27.76■■■□□ 2.04
PCSK4-207ENST00000588195 NUTM2DQ5VT03 806 aaPredicted RBP27.76■■■□□ 2.03
PCSK4-207ENST00000588195 ASXL1Q8IXJ9 1541 aa27.75■■■□□ 2.03
PCSK4-207ENST00000588195 TMEM132EQ6IEE7 984 aa27.74■■■□□ 2.03
PCSK4-207ENST00000588195 TRAK1Q9UPV9 953 aa27.74■■■□□ 2.03
PCSK4-207ENST00000588195 KNSTRNQ9Y448 316 aa27.71■■■□□ 2.03
PCSK4-207ENST00000588195 MLECQ14165 292 aa27.71■■■□□ 2.03
PCSK4-207ENST00000588195 AMER1Q5JTC6 1135 aaPredicted RBP27.69■■■□□ 2.02
PCSK4-207ENST00000588195 NPC1L1Q9UHC9 1359 aa27.69■■■□□ 2.02
PCSK4-207ENST00000588195 FKBP8Q14318 412 aa27.68■■■□□ 2.02
PCSK4-207ENST00000588195 A2ML1A8K2U0 1454 aa27.68■■■□□ 2.02
PCSK4-207ENST00000588195 NEFLP07196 543 aa27.67■■■□□ 2.02
PCSK4-207ENST00000588195 ALKQ9UM73 1620 aa27.64■■■□□ 2.01
PCSK4-207ENST00000588195 TULP4Q9NRJ4 1543 aa27.63■■■□□ 2.01
PCSK4-207ENST00000588195 ZMYM3Q14202 1370 aa27.62■■■□□ 2.01
PCSK4-207ENST00000588195 SETD1AO15047 1707 aaKnown RBP27.61■■■□□ 2.01
PCSK4-207ENST00000588195 STAG3Q9UJ98 1225 aa27.61■■■□□ 2.01
PCSK4-207ENST00000588195 INSRP06213 1382 aa27.6■■■□□ 2.01
PCSK4-207ENST00000588195 PTPRMP28827 1452 aa27.59■■■□□ 2.01
PCSK4-207ENST00000588195 ESF1Q9H501 851 aaKnown RBP27.58■■■□□ 2.01
PCSK4-207ENST00000588195 SMG6Q86US8 1419 aaKnown RBP27.58■■■□□ 2.01
PCSK4-207ENST00000588195 RIMS2Q9UQ26 1411 aa27.57■■■□□ 2
PCSK4-207ENST00000588195 PPP2R1AP30153 589 aa27.56■■■□□ 2
PCSK4-207ENST00000588195 YTHDC2Q9H6S0 1430 aaKnown RBP27.56■■■□□ 2
PCSK4-207ENST00000588195 USP32Q8NFA0 1604 aa27.56■■■□□ 2
PCSK4-207ENST00000588195 PUS7Q96PZ0 661 aaKnown RBP27.55■■■□□ 2
PCSK4-207ENST00000588195 CARD14Q9BXL6 1004 aa27.55■■■□□ 2
PCSK4-207ENST00000588195 BLMP54132 1417 aaPredicted RBP27.55■■■□□ 2
PCSK4-207ENST00000588195 EVC2Q86UK5 1308 aa27.53■■■□□ 2
PCSK4-207ENST00000588195 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
PCSK4-207ENST00000588195 UBR1Q8IWV7 1749 aa27.51■■□□□ 1.99
PCSK4-207ENST00000588195 SENP3Q9H4L4 574 aaPredicted RBP27.5■■□□□ 1.99
PCSK4-207ENST00000588195 TNRQ92752 1358 aa27.49■■□□□ 1.99
PCSK4-207ENST00000588195 BCANQ96GW7 911 aa27.49■■□□□ 1.99
PCSK4-207ENST00000588195 STK26Q9P289 416 aa27.49■■□□□ 1.99
PCSK4-207ENST00000588195 NSD3Q9BZ95 1437 aa27.49■■□□□ 1.99
PCSK4-207ENST00000588195 NUDCQ9Y266 331 aa27.48■■□□□ 1.99
PCSK4-207ENST00000588195 DLC1Q96QB1 1528 aa27.48■■□□□ 1.99
PCSK4-207ENST00000588195 SLC12A5Q9H2X9 1139 aa27.47■■□□□ 1.99
PCSK4-207ENST00000588195 SENP3-EIF4A1A0A087X0R7 540 aa27.45■■□□□ 1.98
PCSK4-207ENST00000588195 SAFB2Q14151 953 aaKnown RBP eCLIP27.43■■□□□ 1.98
PCSK4-207ENST00000588195 FER1L4A9Z1Z3 1794 aa27.43■■□□□ 1.98
PCSK4-207ENST00000588195 PRAM1Q96QH2 718 aa27.42■■□□□ 1.98
PCSK4-207ENST00000588195 C3P01024 1663 aa27.42■■□□□ 1.98
PCSK4-207ENST00000588195 ANKRD36BQ8N2N9 1353 aa27.42■■□□□ 1.98
PCSK4-207ENST00000588195 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms