RNA–Protein interactions for RNA: ENST00000588138.1

ATP6V0A1-217, Transcript of ATPase H+ transporting V0 subunit a1, humanhuman

TSL 5

Gene ATP6V0A1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A1-217ENST00000588138 KDM2AQ9Y2K7 1162 aa16.91■□□□□ 0.3
ATP6V0A1-217ENST00000588138 STRCQ7RTU9 1775 aa16.91■□□□□ 0.3
ATP6V0A1-217ENST00000588138 STAG3Q9UJ98 1225 aa16.89■□□□□ 0.29
ATP6V0A1-217ENST00000588138 NBPF8Q3BBV2 869 aa16.88■□□□□ 0.29
ATP6V0A1-217ENST00000588138 MYO5BQ9ULV0 1848 aa16.88■□□□□ 0.29
ATP6V0A1-217ENST00000588138 MYOM2P54296 1465 aa16.87■□□□□ 0.29
ATP6V0A1-217ENST00000588138 PRAG1Q86YV5 1406 aa16.87■□□□□ 0.29
ATP6V0A1-217ENST00000588138 SLIT1O75093 1534 aa16.86■□□□□ 0.29
ATP6V0A1-217ENST00000588138 THEMISQ8N1K5 641 aaPredicted RBP16.86■□□□□ 0.29
ATP6V0A1-217ENST00000588138 DMRT2Q9Y5R5 561 aa16.86■□□□□ 0.29
ATP6V0A1-217ENST00000588138 ARHGAP23Q9P227 1491 aa16.86■□□□□ 0.29
ATP6V0A1-217ENST00000588138 IFT172Q9UG01 1749 aa16.85■□□□□ 0.29
ATP6V0A1-217ENST00000588138 PPLO60437 1756 aa16.84■□□□□ 0.29
ATP6V0A1-217ENST00000588138 NEXMIFQ5QGS0 1516 aa16.83■□□□□ 0.28
ATP6V0A1-217ENST00000588138 RALGAPBQ86X10 1494 aa16.83■□□□□ 0.28
ATP6V0A1-217ENST00000588138 ZFYVE9O95405 1425 aa16.82■□□□□ 0.28
ATP6V0A1-217ENST00000588138 TMEM2Q9UHN6 1383 aa16.82■□□□□ 0.28
ATP6V0A1-217ENST00000588138 VGFO15240 615 aaPredicted RBP16.82■□□□□ 0.28
ATP6V0A1-217ENST00000588138 FBXO41Q8TF61 875 aa16.82■□□□□ 0.28
ATP6V0A1-217ENST00000588138 NRXN1Q9ULB1 1477 aa16.81■□□□□ 0.28
ATP6V0A1-217ENST00000588138 ADGRF5Q8IZF2 1346 aa16.79■□□□□ 0.28
ATP6V0A1-217ENST00000588138 TRPM1Q7Z4N2 1603 aa16.79■□□□□ 0.28
ATP6V0A1-217ENST00000588138 HDGFP51858 240 aaKnown RBP16.79■□□□□ 0.28
ATP6V0A1-217ENST00000588138 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.79■□□□□ 0.28
ATP6V0A1-217ENST00000588138 RIMS2Q9UQ26 1411 aa16.79■□□□□ 0.28
ATP6V0A1-217ENST00000588138 CERKQ8TCT0 537 aa16.78■□□□□ 0.28
ATP6V0A1-217ENST00000588138 PIK3C2GO75747 1445 aa16.78■□□□□ 0.28
ATP6V0A1-217ENST00000588138 ROCK2O75116 1388 aaKnown RBP16.77■□□□□ 0.28
ATP6V0A1-217ENST00000588138 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
ATP6V0A1-217ENST00000588138 KIAA1210Q9ULL0 1709 aa16.76■□□□□ 0.27
ATP6V0A1-217ENST00000588138 MED14O60244 1454 aa16.76■□□□□ 0.27
ATP6V0A1-217ENST00000588138 GPRASP1Q5JY77 1395 aa16.76■□□□□ 0.27
ATP6V0A1-217ENST00000588138 NCKAP5LQ9HCH0 1330 aa16.75■□□□□ 0.27
ATP6V0A1-217ENST00000588138 ZNF316A6NFI3 1004 aaPredicted RBP16.75■□□□□ 0.27
ATP6V0A1-217ENST00000588138 CARD11Q9BXL7 1154 aa16.75■□□□□ 0.27
ATP6V0A1-217ENST00000588138 SCAF11Q99590 1463 aaKnown RBP16.74■□□□□ 0.27
ATP6V0A1-217ENST00000588138 EIF4G2P78344 907 aaKnown RBP eCLIP16.74■□□□□ 0.27
ATP6V0A1-217ENST00000588138 NUTM2DQ5VT03 806 aaPredicted RBP16.74■□□□□ 0.27
ATP6V0A1-217ENST00000588138 ANKLE2Q86XL3 938 aa16.74■□□□□ 0.27
ATP6V0A1-217ENST00000588138 EID1Q9Y6B2 187 aa16.74■□□□□ 0.27
ATP6V0A1-217ENST00000588138 LAMC1P11047 1609 aa16.74■□□□□ 0.27
ATP6V0A1-217ENST00000588138 LTKP29376 864 aa16.73■□□□□ 0.27
ATP6V0A1-217ENST00000588138 NBPF1Q3BBV0 1214 aa16.73■□□□□ 0.27
ATP6V0A1-217ENST00000588138 CFAP70Q5T0N1 1121 aa16.72■□□□□ 0.27
ATP6V0A1-217ENST00000588138 C14orf93Q9H972 538 aaKnown RBP16.72■□□□□ 0.27
ATP6V0A1-217ENST00000588138 PLEKHG1Q9ULL1 1385 aa16.72■□□□□ 0.27
ATP6V0A1-217ENST00000588138 TXNDC2Q86VQ3 553 aa16.71■□□□□ 0.27
ATP6V0A1-217ENST00000588138 SETBP1Q9Y6X0 1596 aa16.71■□□□□ 0.27
ATP6V0A1-217ENST00000588138 USP47Q96K76 1375 aa16.7■□□□□ 0.26
ATP6V0A1-217ENST00000588138 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
ATP6V0A1-217ENST00000588138 LTBP4Q8N2S1 1624 aa16.7■□□□□ 0.26
ATP6V0A1-217ENST00000588138 NRXN3Q9Y4C0 1643 aa16.68■□□□□ 0.26
ATP6V0A1-217ENST00000588138 IQGAP1P46940 1657 aa16.68■□□□□ 0.26
ATP6V0A1-217ENST00000588138 DIP2AQ14689 1571 aa16.67■□□□□ 0.26
ATP6V0A1-217ENST00000588138 NPHP4O75161 1426 aaPredicted RBP16.66■□□□□ 0.26
ATP6V0A1-217ENST00000588138 ALKQ9UM73 1620 aa16.66■□□□□ 0.26
ATP6V0A1-217ENST00000588138 SETD1AO15047 1707 aaKnown RBP16.65■□□□□ 0.26
ATP6V0A1-217ENST00000588138 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
ATP6V0A1-217ENST00000588138 EIF3AQ14152 1382 aaKnown RBP16.64■□□□□ 0.26
ATP6V0A1-217ENST00000588138 ADAMTS13Q76LX8 1427 aa16.64■□□□□ 0.25
ATP6V0A1-217ENST00000588138 HIRIP3Q9BW71 556 aaPredicted RBP16.64■□□□□ 0.25
ATP6V0A1-217ENST00000588138 ZNF335Q9H4Z2 1342 aaPredicted RBP16.64■□□□□ 0.25
ATP6V0A1-217ENST00000588138 BCANQ96GW7 911 aa16.63■□□□□ 0.25
ATP6V0A1-217ENST00000588138 TBX22Q9Y458 520 aa16.63■□□□□ 0.25
ATP6V0A1-217ENST00000588138 IQSEC2Q5JU85 1478 aa16.61■□□□□ 0.25
ATP6V0A1-217ENST00000588138 ST20-MTHFSA0A0A6YYL1 179 aa16.61■□□□□ 0.25
ATP6V0A1-217ENST00000588138 TMEM132EQ6IEE7 984 aa16.61■□□□□ 0.25
ATP6V0A1-217ENST00000588138 PIK3R4Q99570 1358 aa16.61■□□□□ 0.25
ATP6V0A1-217ENST00000588138 SENP3Q9H4L4 574 aaPredicted RBP16.6■□□□□ 0.25
ATP6V0A1-217ENST00000588138 ASXL1Q8IXJ9 1541 aa16.6■□□□□ 0.25
ATP6V0A1-217ENST00000588138 CHD2O14647 1828 aaKnown RBP16.57■□□□□ 0.24
ATP6V0A1-217ENST00000588138 YTHDC2Q9H6S0 1430 aaKnown RBP16.57■□□□□ 0.24
ATP6V0A1-217ENST00000588138 SLC24A1O60721 1099 aa16.57■□□□□ 0.24
ATP6V0A1-217ENST00000588138 TRAK1Q9UPV9 953 aa16.57■□□□□ 0.24
ATP6V0A1-217ENST00000588138 LRPPRCP42704 1394 aaKnown RBP16.56■□□□□ 0.24
ATP6V0A1-217ENST00000588138 METP08581 1390 aa16.55■□□□□ 0.24
ATP6V0A1-217ENST00000588138 SLC26A8Q96RN1 970 aa16.55■□□□□ 0.24
ATP6V0A1-217ENST00000588138 ABCC11Q96J66 1382 aa16.54■□□□□ 0.24
ATP6V0A1-217ENST00000588138 CENPJQ9HC77 1338 aaPredicted RBP16.54■□□□□ 0.24
ATP6V0A1-217ENST00000588138 TESK2Q96S53 571 aa16.54■□□□□ 0.24
ATP6V0A1-217ENST00000588138 NWD1Q149M9 1564 aa16.54■□□□□ 0.24
ATP6V0A1-217ENST00000588138 TECPR2O15040 1411 aa16.53■□□□□ 0.24
ATP6V0A1-217ENST00000588138 SBNO2Q9Y2G9 1366 aa16.53■□□□□ 0.24
ATP6V0A1-217ENST00000588138 STK26Q9P289 416 aa16.53■□□□□ 0.24
ATP6V0A1-217ENST00000588138 CPS1P31327 1500 aa16.53■□□□□ 0.24
ATP6V0A1-217ENST00000588138 DLC1Q96QB1 1528 aa16.53■□□□□ 0.24
ATP6V0A1-217ENST00000588138 KNDC1Q76NI1 1749 aa16.53■□□□□ 0.24
ATP6V0A1-217ENST00000588138 XRN1Q8IZH2 1706 aaKnown RBP16.53■□□□□ 0.24
ATP6V0A1-217ENST00000588138 TMF1P82094 1093 aa16.52■□□□□ 0.24
ATP6V0A1-217ENST00000588138 ARHGEF28Q8N1W1 1705 aaKnown RBP16.52■□□□□ 0.24
ATP6V0A1-217ENST00000588138 CCDC7Q96M83 1385 aa16.51■□□□□ 0.23
ATP6V0A1-217ENST00000588138 WASHC2AQ641Q2 1341 aa16.51■□□□□ 0.23
ATP6V0A1-217ENST00000588138 C11orf95C9JLR9 678 aaPredicted RBP16.51■□□□□ 0.23
ATP6V0A1-217ENST00000588138 PTPRUQ92729 1446 aa16.51■□□□□ 0.23
ATP6V0A1-217ENST00000588138 KIF7Q2M1P5 1343 aa16.5■□□□□ 0.23
ATP6V0A1-217ENST00000588138 KCNA6P17658 529 aa16.5■□□□□ 0.23
ATP6V0A1-217ENST00000588138 SIRT1Q96EB6 747 aa16.5■□□□□ 0.23
ATP6V0A1-217ENST00000588138 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
ATP6V0A1-217ENST00000588138 STRCP1A6NGW2 1772 aa16.49■□□□□ 0.23
ATP6V0A1-217ENST00000588138 NKTRP30414 1462 aaKnown RBP16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms