RNA–Protein interactions for RNA: ENST00000587368.1

CHAF1A-204, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-204ENST00000587368 SPHKAPQ2M3C7 1700 aa20.3■□□□□ 0.84
CHAF1A-204ENST00000587368 ZFYVE9O95405 1425 aa20.29■□□□□ 0.84
CHAF1A-204ENST00000587368 TRPM2O94759 1503 aa20.29■□□□□ 0.84
CHAF1A-204ENST00000587368 HRCP23327 699 aa20.29■□□□□ 0.84
CHAF1A-204ENST00000587368 FOXD1Q16676 465 aa20.28■□□□□ 0.84
CHAF1A-204ENST00000587368 ZNF326Q5BKZ1 582 aaKnown RBP20.28■□□□□ 0.84
CHAF1A-204ENST00000587368 SLC26A8Q96RN1 970 aa20.27■□□□□ 0.84
CHAF1A-204ENST00000587368 IQSEC2Q5JU85 1478 aa20.26■□□□□ 0.83
CHAF1A-204ENST00000587368 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
CHAF1A-204ENST00000587368 NUTM2DQ5VT03 806 aaPredicted RBP20.26■□□□□ 0.83
CHAF1A-204ENST00000587368 CPS1P31327 1500 aa20.26■□□□□ 0.83
CHAF1A-204ENST00000587368 MYO5BQ9ULV0 1848 aa20.24■□□□□ 0.83
CHAF1A-204ENST00000587368 SENP3Q9H4L4 574 aaPredicted RBP20.23■□□□□ 0.83
CHAF1A-204ENST00000587368 CLTCL1P53675 1640 aa20.22■□□□□ 0.83
CHAF1A-204ENST00000587368 TBX22Q9Y458 520 aa20.21■□□□□ 0.83
CHAF1A-204ENST00000587368 CCDC144AA2RUR9 1427 aa20.2■□□□□ 0.82
CHAF1A-204ENST00000587368 KCNA6P17658 529 aa20.2■□□□□ 0.82
CHAF1A-204ENST00000587368 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
CHAF1A-204ENST00000587368 UBAP1LF5GYI3 381 aa20.17■□□□□ 0.82
CHAF1A-204ENST00000587368 VGFO15240 615 aaPredicted RBP20.16■□□□□ 0.82
CHAF1A-204ENST00000587368 KIF1BO60333 1816 aa20.16■□□□□ 0.82
CHAF1A-204ENST00000587368 LRRC7Q96NW7 1537 aa20.14■□□□□ 0.81
CHAF1A-204ENST00000587368 ADAMTS13Q76LX8 1427 aa20.14■□□□□ 0.81
CHAF1A-204ENST00000587368 TOM1O60784 492 aa20.13■□□□□ 0.81
CHAF1A-204ENST00000587368 RGL3Q3MIN7 710 aa20.13■□□□□ 0.81
CHAF1A-204ENST00000587368 PROSER2Q86WR7 435 aaPredicted RBP20.13■□□□□ 0.81
CHAF1A-204ENST00000587368 PIK3R4Q99570 1358 aa20.12■□□□□ 0.81
CHAF1A-204ENST00000587368 STRCP1A6NGW2 1772 aa20.11■□□□□ 0.81
CHAF1A-204ENST00000587368 NEXMIFQ5QGS0 1516 aa20.11■□□□□ 0.81
CHAF1A-204ENST00000587368 DIP2AQ14689 1571 aa20.09■□□□□ 0.81
CHAF1A-204ENST00000587368 SPATA31E1Q6ZUB1 1445 aa20.09■□□□□ 0.81
CHAF1A-204ENST00000587368 ANKRD30BQ9BXX2 1392 aa20.08■□□□□ 0.81
CHAF1A-204ENST00000587368 TMEM94Q12767 1356 aa20.08■□□□□ 0.8
CHAF1A-204ENST00000587368 NKTRP30414 1462 aaKnown RBP20.07■□□□□ 0.8
CHAF1A-204ENST00000587368 TRIM26Q12899 539 aaPredicted RBP20.07■□□□□ 0.8
CHAF1A-204ENST00000587368 SETBP1Q9Y6X0 1596 aa20.07■□□□□ 0.8
CHAF1A-204ENST00000587368 AMOTL2Q9Y2J4 779 aa20.06■□□□□ 0.8
CHAF1A-204ENST00000587368 NWD1Q149M9 1564 aa20.05■□□□□ 0.8
CHAF1A-204ENST00000587368 PIP4K2BP78356 416 aa20.04■□□□□ 0.8
CHAF1A-204ENST00000587368 RBM33Q96EV2 1170 aaKnown RBP20.04■□□□□ 0.8
CHAF1A-204ENST00000587368 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
CHAF1A-204ENST00000587368 CHD2O14647 1828 aaKnown RBP20.02■□□□□ 0.8
CHAF1A-204ENST00000587368 METP08581 1390 aa20.02■□□□□ 0.8
CHAF1A-204ENST00000587368 ADGRF5Q8IZF2 1346 aa20.02■□□□□ 0.79
CHAF1A-204ENST00000587368 NRXN3Q9Y4C0 1643 aa20.01■□□□□ 0.79
CHAF1A-204ENST00000587368 C14orf37Q86TY3 774 aa20■□□□□ 0.79
CHAF1A-204ENST00000587368 PTPRUQ92729 1446 aa20■□□□□ 0.79
CHAF1A-204ENST00000587368 MSH6P52701 1360 aa19.99■□□□□ 0.79
CHAF1A-204ENST00000587368 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
CHAF1A-204ENST00000587368 PPLO60437 1756 aa19.98■□□□□ 0.79
CHAF1A-204ENST00000587368 ALKQ9UM73 1620 aa19.95■□□□□ 0.78
CHAF1A-204ENST00000587368 C19orf44Q9H6X5 657 aa19.95■□□□□ 0.78
CHAF1A-204ENST00000587368 STAC3Q96MF2 364 aa19.94■□□□□ 0.78
CHAF1A-204ENST00000587368 XIRP1Q702N8 1843 aaKnown RBP19.94■□□□□ 0.78
CHAF1A-204ENST00000587368 DCAF11Q8TEB1 546 aa19.92■□□□□ 0.78
CHAF1A-204ENST00000587368 PIK3C2GO75747 1445 aa19.92■□□□□ 0.78
CHAF1A-204ENST00000587368 ATF3P18847 181 aa19.91■□□□□ 0.78
CHAF1A-204ENST00000587368 CADPS2Q86UW7 1296 aa19.91■□□□□ 0.78
CHAF1A-204ENST00000587368 C14orf93Q9H972 538 aaKnown RBP19.91■□□□□ 0.78
CHAF1A-204ENST00000587368 XRN1Q8IZH2 1706 aaKnown RBP19.9■□□□□ 0.78
CHAF1A-204ENST00000587368 HSPA1LP34931 641 aa19.9■□□□□ 0.78
CHAF1A-204ENST00000587368 SLAIN2Q9P270 581 aa19.9■□□□□ 0.78
CHAF1A-204ENST00000587368 KDM2AQ9Y2K7 1162 aa19.9■□□□□ 0.78
CHAF1A-204ENST00000587368 MYOM2P54296 1465 aa19.9■□□□□ 0.78
CHAF1A-204ENST00000587368 IFT172Q9UG01 1749 aa19.9■□□□□ 0.78
CHAF1A-204ENST00000587368 NRXN1Q9ULB1 1477 aa19.88■□□□□ 0.77
CHAF1A-204ENST00000587368 FAM135BQ49AJ0 1406 aa19.88■□□□□ 0.77
CHAF1A-204ENST00000587368 CFAP70Q5T0N1 1121 aa19.88■□□□□ 0.77
CHAF1A-204ENST00000587368 TMEM132EQ6IEE7 984 aa19.88■□□□□ 0.77
CHAF1A-204ENST00000587368 PTCH1Q13635 1447 aa19.87■□□□□ 0.77
CHAF1A-204ENST00000587368 STK26Q9P289 416 aa19.87■□□□□ 0.77
CHAF1A-204ENST00000587368 PRAG1Q86YV5 1406 aa19.86■□□□□ 0.77
CHAF1A-204ENST00000587368 ROBO2Q9HCK4 1378 aa19.86■□□□□ 0.77
CHAF1A-204ENST00000587368 SETD1AO15047 1707 aaKnown RBP19.86■□□□□ 0.77
CHAF1A-204ENST00000587368 LRPPRCP42704 1394 aaKnown RBP19.85■□□□□ 0.77
CHAF1A-204ENST00000587368 DHX57Q6P158 1386 aaKnown RBP19.85■□□□□ 0.77
CHAF1A-204ENST00000587368 ABCC11Q96J66 1382 aa19.84■□□□□ 0.77
CHAF1A-204ENST00000587368 DCCP43146 1447 aa19.84■□□□□ 0.77
CHAF1A-204ENST00000587368 ADGRL3Q9HAR2 1447 aa19.83■□□□□ 0.76
CHAF1A-204ENST00000587368 SIN3AQ96ST3 1273 aa19.81■□□□□ 0.76
CHAF1A-204ENST00000587368 YTHDC2Q9H6S0 1430 aaKnown RBP19.81■□□□□ 0.76
CHAF1A-204ENST00000587368 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.8■□□□□ 0.76
CHAF1A-204ENST00000587368 TECPR2O15040 1411 aa19.8■□□□□ 0.76
CHAF1A-204ENST00000587368 SIRT1Q96EB6 747 aa19.8■□□□□ 0.76
CHAF1A-204ENST00000587368 NEUROD1Q13562 356 aa19.79■□□□□ 0.76
CHAF1A-204ENST00000587368 WAPLQ7Z5K2 1190 aa19.79■□□□□ 0.76
CHAF1A-204ENST00000587368 ASXL1Q8IXJ9 1541 aa19.78■□□□□ 0.76
CHAF1A-204ENST00000587368 LAMC1P11047 1609 aa19.78■□□□□ 0.76
CHAF1A-204ENST00000587368 ROBO1Q9Y6N7 1651 aa19.75■□□□□ 0.75
CHAF1A-204ENST00000587368 L3MBTL2Q969R5 705 aa19.75■□□□□ 0.75
CHAF1A-204ENST00000587368 BRINP3Q76B58 766 aa19.74■□□□□ 0.75
CHAF1A-204ENST00000587368 MST1RQ04912 1400 aa19.74■□□□□ 0.75
CHAF1A-204ENST00000587368 PCGF6Q9BYE7 350 aa19.73■□□□□ 0.75
CHAF1A-204ENST00000587368 POGKQ9P215 609 aa19.73■□□□□ 0.75
CHAF1A-204ENST00000587368 PLEKHH1Q9ULM0 1364 aa19.72■□□□□ 0.75
CHAF1A-204ENST00000587368 PRAM1Q96QH2 718 aa19.72■□□□□ 0.75
CHAF1A-204ENST00000587368 TRAK1Q9UPV9 953 aa19.72■□□□□ 0.75
CHAF1A-204ENST00000587368 NALCNQ8IZF0 1738 aa19.71■□□□□ 0.75
CHAF1A-204ENST00000587368 KNDC1Q76NI1 1749 aa19.71■□□□□ 0.75
CHAF1A-204ENST00000587368 ADGRB1O14514 1584 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms