RNA–Protein interactions for RNA: ENST00000587263.5

RANBP3-208, Transcript of RAN binding protein 3, humanhuman

TSL 5

Gene RANBP3, Length 579 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-208ENST00000587263 KANK4Q5T7N3 995 aaPredicted RBP23.23■■□□□ 1.31
RANBP3-208ENST00000587263 ZNF772Q68DY9 489 aaPredicted RBP23.23■■□□□ 1.31
RANBP3-208ENST00000587263 UPF1Q92900 1129 aaKnown RBP eCLIP23.22■■□□□ 1.31
RANBP3-208ENST00000587263 SLC52A1Q9NWF4 448 aa23.22■■□□□ 1.31
RANBP3-208ENST00000587263 MEX3CQ5U5Q3 659 aaKnown RBP23.21■■□□□ 1.31
RANBP3-208ENST00000587263 LRP6O75581 1613 aa23.21■■□□□ 1.31
RANBP3-208ENST00000587263 DAPK1P53355 1430 aa23.19■■□□□ 1.3
RANBP3-208ENST00000587263 NCOA3Q9Y6Q9 1424 aa23.18■■□□□ 1.3
RANBP3-208ENST00000587263 PLEKHG1Q9ULL1 1385 aa23.18■■□□□ 1.3
RANBP3-208ENST00000587263 PTPN23Q9H3S7 1636 aa23.18■■□□□ 1.3
RANBP3-208ENST00000587263 CHD2O14647 1828 aaKnown RBP23.17■■□□□ 1.3
RANBP3-208ENST00000587263 ANKRD30AQ9BXX3 1397 aa23.17■■□□□ 1.3
RANBP3-208ENST00000587263 TRIM52Q96A61 297 aa23.17■■□□□ 1.3
RANBP3-208ENST00000587263 ZFYVE9O95405 1425 aa23.16■■□□□ 1.3
RANBP3-208ENST00000587263 PPP1R15AO75807 674 aaPredicted RBP23.15■■□□□ 1.3
RANBP3-208ENST00000587263 HDGFP51858 240 aaKnown RBP23.15■■□□□ 1.3
RANBP3-208ENST00000587263 AHDC1Q5TGY3 1603 aaPredicted RBP23.15■■□□□ 1.3
RANBP3-208ENST00000587263 SHPRHQ149N8 1683 aa23.14■■□□□ 1.29
RANBP3-208ENST00000587263 RPRD2Q5VT52 1461 aaKnown RBP23.13■■□□□ 1.29
RANBP3-208ENST00000587263 C14orf37Q86TY3 774 aa23.13■■□□□ 1.29
RANBP3-208ENST00000587263 CADPS2Q86UW7 1296 aa23.12■■□□□ 1.29
RANBP3-208ENST00000587263 RIMS2Q9UQ26 1411 aa23.12■■□□□ 1.29
RANBP3-208ENST00000587263 RXRBP28702 533 aa23.11■■□□□ 1.29
RANBP3-208ENST00000587263 TBX22Q9Y458 520 aa23.11■■□□□ 1.29
RANBP3-208ENST00000587263 CDK12Q9NYV4 1490 aaPredicted RBP23.11■■□□□ 1.29
RANBP3-208ENST00000587263 CHIC2Q9UKJ5 165 aa23.09■■□□□ 1.29
RANBP3-208ENST00000587263 ATF3P18847 181 aa23.08■■□□□ 1.29
RANBP3-208ENST00000587263 GCC2Q8IWJ2 1684 aa23.07■■□□□ 1.28
RANBP3-208ENST00000587263 C19orf44Q9H6X5 657 aa23.07■■□□□ 1.28
RANBP3-208ENST00000587263 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.07■■□□□ 1.28
RANBP3-208ENST00000587263 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.06■■□□□ 1.28
RANBP3-208ENST00000587263 DIP2AQ14689 1571 aa23.06■■□□□ 1.28
RANBP3-208ENST00000587263 TMEM131LA2VDJ0 1609 aa23.05■■□□□ 1.28
RANBP3-208ENST00000587263 PIK3R4Q99570 1358 aa23.05■■□□□ 1.28
RANBP3-208ENST00000587263 MYO5BQ9ULV0 1848 aa23.05■■□□□ 1.28
RANBP3-208ENST00000587263 ADAMTS13Q76LX8 1427 aa23.02■■□□□ 1.28
RANBP3-208ENST00000587263 ADGRL2O95490 1459 aa23.02■■□□□ 1.28
RANBP3-208ENST00000587263 NUTM2BA6NNL0 878 aaPredicted RBP23.01■■□□□ 1.27
RANBP3-208ENST00000587263 NUTM2EB1AL46 878 aaPredicted RBP23.01■■□□□ 1.27
RANBP3-208ENST00000587263 NUTM2AQ8IVF1 878 aaPredicted RBP23.01■■□□□ 1.27
RANBP3-208ENST00000587263 APLP2Q06481 763 aa23■■□□□ 1.27
RANBP3-208ENST00000587263 BRINP3Q76B58 766 aa23■■□□□ 1.27
RANBP3-208ENST00000587263 AFF2P51816 1311 aa22.99■■□□□ 1.27
RANBP3-208ENST00000587263 DCCP43146 1447 aa22.99■■□□□ 1.27
RANBP3-208ENST00000587263 CHGAP10645 457 aaKnown RBP22.98■■□□□ 1.27
RANBP3-208ENST00000587263 ANKRD50Q9ULJ7 1429 aa22.98■■□□□ 1.27
RANBP3-208ENST00000587263 TRPM2O94759 1503 aa22.98■■□□□ 1.27
RANBP3-208ENST00000587263 SETD5Q9C0A6 1442 aa22.96■■□□□ 1.27
RANBP3-208ENST00000587263 ASXL1Q8IXJ9 1541 aa22.95■■□□□ 1.26
RANBP3-208ENST00000587263 AMOTL2Q9Y2J4 779 aa22.94■■□□□ 1.26
RANBP3-208ENST00000587263 RGS12O14924 1447 aa22.93■■□□□ 1.26
RANBP3-208ENST00000587263 NUTM2DQ5VT03 806 aaPredicted RBP22.93■■□□□ 1.26
RANBP3-208ENST00000587263 RBM6P78332 1123 aaKnown RBP22.91■■□□□ 1.26
RANBP3-208ENST00000587263 LRRC59Q96AG4 307 aaKnown RBP22.91■■□□□ 1.26
RANBP3-208ENST00000587263 NHSL1Q5SYE7 1610 aa22.9■■□□□ 1.26
RANBP3-208ENST00000587263 LOC105371045A0A1W2PR82 267 aa22.9■■□□□ 1.26
RANBP3-208ENST00000587263 PTPRUQ92729 1446 aa22.9■■□□□ 1.26
RANBP3-208ENST00000587263 MST1RQ04912 1400 aa22.89■■□□□ 1.25
RANBP3-208ENST00000587263 UNC13BO14795 1591 aa22.89■■□□□ 1.25
RANBP3-208ENST00000587263 C8orf37Q96NL8 207 aa22.88■■□□□ 1.25
RANBP3-208ENST00000587263 QTRT2Q9H974 415 aaKnown RBP22.88■■□□□ 1.25
RANBP3-208ENST00000587263 XRN1Q8IZH2 1706 aaKnown RBP22.86■■□□□ 1.25
RANBP3-208ENST00000587263 E9PCH4 1651 aa22.86■■□□□ 1.25
RANBP3-208ENST00000587263 PNPLA6Q8IY17 1366 aa22.86■■□□□ 1.25
RANBP3-208ENST00000587263 FAM50AQ14320 339 aaKnown RBP22.84■■□□□ 1.25
RANBP3-208ENST00000587263 NGLY1Q96IV0 654 aa22.84■■□□□ 1.25
RANBP3-208ENST00000587263 ATAD2Q6PL18 1390 aa22.83■■□□□ 1.25
RANBP3-208ENST00000587263 FOXD1Q16676 465 aa22.82■■□□□ 1.24
RANBP3-208ENST00000587263 SETBP1Q9Y6X0 1596 aa22.8■■□□□ 1.24
RANBP3-208ENST00000587263 SRCAPQ6ZRS2 3230 aa22.8■■□□□ 1.24
RANBP3-208ENST00000587263 ADGRL3Q9HAR2 1447 aa22.8■■□□□ 1.24
RANBP3-208ENST00000587263 IQGAP3Q86VI3 1631 aa22.79■■□□□ 1.24
RANBP3-208ENST00000587263 NRXN3Q9Y4C0 1643 aa22.79■■□□□ 1.24
RANBP3-208ENST00000587263 ADAMTS2O95450 1211 aa22.76■■□□□ 1.23
RANBP3-208ENST00000587263 DDX17Q92841 729 aaKnown RBP22.76■■□□□ 1.23
RANBP3-208ENST00000587263 ZRANB1Q9UGI0 708 aa22.74■■□□□ 1.23
RANBP3-208ENST00000587263 METP08581 1390 aa22.74■■□□□ 1.23
RANBP3-208ENST00000587263 TRPC5Q9UL62 973 aaPredicted RBP22.73■■□□□ 1.23
RANBP3-208ENST00000587263 NALCNQ8IZF0 1738 aa22.73■■□□□ 1.23
RANBP3-208ENST00000587263 USP21Q9UK80 565 aa22.72■■□□□ 1.23
RANBP3-208ENST00000587263 NUP155O75694 1391 aa22.71■■□□□ 1.23
RANBP3-208ENST00000587263 LAMC1P11047 1609 aa22.71■■□□□ 1.23
RANBP3-208ENST00000587263 ROCK1Q13464 1354 aa22.7■■□□□ 1.22
RANBP3-208ENST00000587263 PTCH1Q13635 1447 aa22.7■■□□□ 1.22
RANBP3-208ENST00000587263 C1orf167Q5SNV9 1468 aa22.7■■□□□ 1.22
RANBP3-208ENST00000587263 ZNF326Q5BKZ1 582 aaKnown RBP22.69■■□□□ 1.22
RANBP3-208ENST00000587263 SOS2Q07890 1332 aaPredicted RBP22.67■■□□□ 1.22
RANBP3-208ENST00000587263 FNBP4Q8N3X1 1017 aaPredicted RBP22.67■■□□□ 1.22
RANBP3-208ENST00000587263 CCDC125Q86Z20 511 aa22.66■■□□□ 1.22
RANBP3-208ENST00000587263 ATRNO75882 1429 aa22.65■■□□□ 1.22
RANBP3-208ENST00000587263 SPHKAPQ2M3C7 1700 aa22.65■■□□□ 1.22
RANBP3-208ENST00000587263 NEXMIFQ5QGS0 1516 aa22.62■■□□□ 1.21
RANBP3-208ENST00000587263 COL22A1Q8NFW1 1626 aaPredicted RBP22.61■■□□□ 1.21
RANBP3-208ENST00000587263 ORAI2Q96SN7 254 aa22.61■■□□□ 1.21
RANBP3-208ENST00000587263 MYOM2P54296 1465 aa22.57■■□□□ 1.2
RANBP3-208ENST00000587263 EP400Q96L91 3159 aa22.57■■□□□ 1.2
RANBP3-208ENST00000587263 PRAG1Q86YV5 1406 aa22.56■■□□□ 1.2
RANBP3-208ENST00000587263 ROBO2Q9HCK4 1378 aa22.55■■□□□ 1.2
RANBP3-208ENST00000587263 BCL9LQ86UU0 1499 aa22.54■■□□□ 1.2
RANBP3-208ENST00000587263 CLTCL1P53675 1640 aa22.54■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms