RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 NKTRP30414 1462 aaKnown RBP17.01■□□□□ 0.31
ACTN4-209ENST00000586538 RIMS2Q9UQ26 1411 aa17.01■□□□□ 0.31
ACTN4-209ENST00000586538 ZFYVE9O95405 1425 aa17■□□□□ 0.31
ACTN4-209ENST00000586538 CHGAP10645 457 aaKnown RBP17■□□□□ 0.31
ACTN4-209ENST00000586538 KCNA6P17658 529 aa17■□□□□ 0.31
ACTN4-209ENST00000586538 NWD1Q149M9 1564 aa16.98■□□□□ 0.31
ACTN4-209ENST00000586538 SPHKAPQ2M3C7 1700 aa16.98■□□□□ 0.31
ACTN4-209ENST00000586538 MYO5BQ9ULV0 1848 aa16.98■□□□□ 0.31
ACTN4-209ENST00000586538 DIP2AQ14689 1571 aa16.98■□□□□ 0.31
ACTN4-209ENST00000586538 HSPA1LP34931 641 aa16.96■□□□□ 0.31
ACTN4-209ENST00000586538 SLC26A8Q96RN1 970 aa16.96■□□□□ 0.31
ACTN4-209ENST00000586538 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
ACTN4-209ENST00000586538 NAIPQ13075 1403 aa16.95■□□□□ 0.3
ACTN4-209ENST00000586538 TMEM94Q12767 1356 aa16.94■□□□□ 0.3
ACTN4-209ENST00000586538 PIK3R4Q99570 1358 aa16.94■□□□□ 0.3
ACTN4-209ENST00000586538 PROSER2Q86WR7 435 aaPredicted RBP16.94■□□□□ 0.3
ACTN4-209ENST00000586538 ALKQ9UM73 1620 aa16.93■□□□□ 0.3
ACTN4-209ENST00000586538 TBX22Q9Y458 520 aa16.93■□□□□ 0.3
ACTN4-209ENST00000586538 MSH6P52701 1360 aa16.92■□□□□ 0.3
ACTN4-209ENST00000586538 XIRP1Q702N8 1843 aaKnown RBP16.92■□□□□ 0.3
ACTN4-209ENST00000586538 NCOA3Q9Y6Q9 1424 aa16.91■□□□□ 0.3
ACTN4-209ENST00000586538 ACIN1Q9UKV3 1341 aaKnown RBP16.91■□□□□ 0.3
ACTN4-209ENST00000586538 CHD2O14647 1828 aaKnown RBP16.91■□□□□ 0.3
ACTN4-209ENST00000586538 TRPM2O94759 1503 aa16.91■□□□□ 0.3
ACTN4-209ENST00000586538 FAM135BQ49AJ0 1406 aa16.88■□□□□ 0.29
ACTN4-209ENST00000586538 ZNF326Q5BKZ1 582 aaKnown RBP16.88■□□□□ 0.29
ACTN4-209ENST00000586538 TRIM52Q96A61 297 aa16.88■□□□□ 0.29
ACTN4-209ENST00000586538 MED1Q15648 1581 aaPredicted RBP16.87■□□□□ 0.29
ACTN4-209ENST00000586538 KIF1BO60333 1816 aa16.86■□□□□ 0.29
ACTN4-209ENST00000586538 ADAMTS13Q76LX8 1427 aa16.86■□□□□ 0.29
ACTN4-209ENST00000586538 SETBP1Q9Y6X0 1596 aa16.85■□□□□ 0.29
ACTN4-209ENST00000586538 C14orf37Q86TY3 774 aa16.84■□□□□ 0.29
ACTN4-209ENST00000586538 PHF23Q9BUL5 403 aaPredicted RBP16.84■□□□□ 0.29
ACTN4-209ENST00000586538 SLC4A1APQ9BWU0 796 aaKnown RBP16.84■□□□□ 0.29
ACTN4-209ENST00000586538 CLTCL1P53675 1640 aa16.84■□□□□ 0.29
ACTN4-209ENST00000586538 NUTM2DQ5VT03 806 aaPredicted RBP16.83■□□□□ 0.28
ACTN4-209ENST00000586538 ROBO1Q9Y6N7 1651 aa16.82■□□□□ 0.28
ACTN4-209ENST00000586538 SOCS7O14512 581 aa16.81■□□□□ 0.28
ACTN4-209ENST00000586538 SENP3Q9H4L4 574 aaPredicted RBP16.81■□□□□ 0.28
ACTN4-209ENST00000586538 ILDR2Q71H61 639 aa16.8■□□□□ 0.28
ACTN4-209ENST00000586538 CADPS2Q86UW7 1296 aa16.8■□□□□ 0.28
ACTN4-209ENST00000586538 RPGRIP1LQ68CZ1 1315 aa16.79■□□□□ 0.28
ACTN4-209ENST00000586538 VGFO15240 615 aaPredicted RBP16.79■□□□□ 0.28
ACTN4-209ENST00000586538 ATF3P18847 181 aa16.79■□□□□ 0.28
ACTN4-209ENST00000586538 C19orf44Q9H6X5 657 aa16.79■□□□□ 0.28
ACTN4-209ENST00000586538 SLAIN2Q9P270 581 aa16.79■□□□□ 0.28
ACTN4-209ENST00000586538 AMOTL2Q9Y2J4 779 aa16.79■□□□□ 0.28
ACTN4-209ENST00000586538 NEXMIFQ5QGS0 1516 aa16.79■□□□□ 0.28
ACTN4-209ENST00000586538 DCCP43146 1447 aa16.79■□□□□ 0.28
ACTN4-209ENST00000586538 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
ACTN4-209ENST00000586538 RBM33Q96EV2 1170 aaKnown RBP16.77■□□□□ 0.28
ACTN4-209ENST00000586538 XRN1Q8IZH2 1706 aaKnown RBP16.76■□□□□ 0.27
ACTN4-209ENST00000586538 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
ACTN4-209ENST00000586538 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.74■□□□□ 0.27
ACTN4-209ENST00000586538 PHLPP1O60346 1717 aa16.73■□□□□ 0.27
ACTN4-209ENST00000586538 PTPRUQ92729 1446 aa16.72■□□□□ 0.27
ACTN4-209ENST00000586538 JCADQ9P266 1359 aa16.71■□□□□ 0.27
ACTN4-209ENST00000586538 PPLO60437 1756 aa16.7■□□□□ 0.26
ACTN4-209ENST00000586538 METP08581 1390 aa16.7■□□□□ 0.26
ACTN4-209ENST00000586538 PTCH1Q13635 1447 aa16.7■□□□□ 0.26
ACTN4-209ENST00000586538 SETD5Q9C0A6 1442 aa16.7■□□□□ 0.26
ACTN4-209ENST00000586538 MPHOSPH9Q99550 1183 aa16.69■□□□□ 0.26
ACTN4-209ENST00000586538 AHDC1Q5TGY3 1603 aaPredicted RBP16.69■□□□□ 0.26
ACTN4-209ENST00000586538 ADGRL3Q9HAR2 1447 aa16.69■□□□□ 0.26
ACTN4-209ENST00000586538 ANKRD30BQ9BXX2 1392 aa16.68■□□□□ 0.26
ACTN4-209ENST00000586538 PRAG1Q86YV5 1406 aa16.67■□□□□ 0.26
ACTN4-209ENST00000586538 COL16A1Q07092 1604 aaPredicted RBP16.67■□□□□ 0.26
ACTN4-209ENST00000586538 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
ACTN4-209ENST00000586538 SETD1AO15047 1707 aaKnown RBP16.65■□□□□ 0.26
ACTN4-209ENST00000586538 MST1RQ04912 1400 aa16.62■□□□□ 0.25
ACTN4-209ENST00000586538 NALCNQ8IZF0 1738 aa16.62■□□□□ 0.25
ACTN4-209ENST00000586538 ASXL1Q8IXJ9 1541 aa16.62■□□□□ 0.25
ACTN4-209ENST00000586538 FOXD1Q16676 465 aa16.62■□□□□ 0.25
ACTN4-209ENST00000586538 BRINP3Q76B58 766 aa16.62■□□□□ 0.25
ACTN4-209ENST00000586538 SHPRHQ149N8 1683 aa16.62■□□□□ 0.25
ACTN4-209ENST00000586538 SPATA31E1Q6ZUB1 1445 aa16.62■□□□□ 0.25
ACTN4-209ENST00000586538 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
ACTN4-209ENST00000586538 RGL3Q3MIN7 710 aa16.6■□□□□ 0.25
ACTN4-209ENST00000586538 RAB3GAP2Q9H2M9 1393 aa16.6■□□□□ 0.25
ACTN4-209ENST00000586538 NHSL1Q5SYE7 1610 aa16.59■□□□□ 0.25
ACTN4-209ENST00000586538 MEX3CQ5U5Q3 659 aaKnown RBP16.58■□□□□ 0.24
ACTN4-209ENST00000586538 LAMC1P11047 1609 aa16.57■□□□□ 0.24
ACTN4-209ENST00000586538 PIK3C2GO75747 1445 aa16.57■□□□□ 0.24
ACTN4-209ENST00000586538 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
ACTN4-209ENST00000586538 LRRC59Q96AG4 307 aaKnown RBP16.57■□□□□ 0.24
ACTN4-209ENST00000586538 HRCP23327 699 aa16.56■□□□□ 0.24
ACTN4-209ENST00000586538 MYOM2P54296 1465 aa16.55■□□□□ 0.24
ACTN4-209ENST00000586538 C1orf167Q5SNV9 1468 aa16.55■□□□□ 0.24
ACTN4-209ENST00000586538 TECPR2O15040 1411 aa16.55■□□□□ 0.24
ACTN4-209ENST00000586538 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
ACTN4-209ENST00000586538 KNDC1Q76NI1 1749 aa16.55■□□□□ 0.24
ACTN4-209ENST00000586538 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
ACTN4-209ENST00000586538 ZNF772Q68DY9 489 aaPredicted RBP16.54■□□□□ 0.24
ACTN4-209ENST00000586538 LRPPRCP42704 1394 aaKnown RBP16.53■□□□□ 0.24
ACTN4-209ENST00000586538 RGS17Q9UGC6 210 aaPredicted RBP16.53■□□□□ 0.24
ACTN4-209ENST00000586538 ABCC11Q96J66 1382 aa16.52■□□□□ 0.24
ACTN4-209ENST00000586538 STAC3Q96MF2 364 aa16.52■□□□□ 0.24
ACTN4-209ENST00000586538 NRXN1Q9ULB1 1477 aa16.5■□□□□ 0.23
ACTN4-209ENST00000586538 DHX57Q6P158 1386 aaKnown RBP16.5■□□□□ 0.23
ACTN4-209ENST00000586538 LRP6O75581 1613 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms