RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 EIF4G2P78344 907 aaKnown RBP eCLIP28.87■■■□□ 2.21
ATG4D-204ENST00000586417 CEP170BQ9Y4F5 1589 aaPredicted RBP28.86■■■□□ 2.21
ATG4D-204ENST00000586417 KDM5AP29375 1690 aaKnown RBP28.85■■■□□ 2.21
ATG4D-204ENST00000586417 IFT172Q9UG01 1749 aa28.84■■■□□ 2.21
ATG4D-204ENST00000586417 NUTM2DQ5VT03 806 aaPredicted RBP28.83■■■□□ 2.21
ATG4D-204ENST00000586417 PPLO60437 1756 aa28.83■■■□□ 2.21
ATG4D-204ENST00000586417 ZNF142P52746 1687 aaPredicted RBP28.83■■■□□ 2.21
ATG4D-204ENST00000586417 PRAG1Q86YV5 1406 aa28.83■■■□□ 2.2
ATG4D-204ENST00000586417 NEXMIFQ5QGS0 1516 aa28.81■■■□□ 2.2
ATG4D-204ENST00000586417 MIER1Q8N108 512 aa28.8■■■□□ 2.2
ATG4D-204ENST00000586417 TRPM1Q7Z4N2 1603 aa28.78■■■□□ 2.2
ATG4D-204ENST00000586417 RPGRIP1LQ68CZ1 1315 aa28.77■■■□□ 2.2
ATG4D-204ENST00000586417 RIMS2Q9UQ26 1411 aa28.75■■■□□ 2.19
ATG4D-204ENST00000586417 TMEM2Q9UHN6 1383 aa28.75■■■□□ 2.19
ATG4D-204ENST00000586417 ADGRF5Q8IZF2 1346 aa28.75■■■□□ 2.19
ATG4D-204ENST00000586417 ZFYVE9O95405 1425 aa28.75■■■□□ 2.19
ATG4D-204ENST00000586417 THEMISQ8N1K5 641 aaPredicted RBP28.75■■■□□ 2.19
ATG4D-204ENST00000586417 DDX10Q13206 875 aaKnown RBP28.73■■■□□ 2.19
ATG4D-204ENST00000586417 SENP3Q9H4L4 574 aaPredicted RBP28.73■■■□□ 2.19
ATG4D-204ENST00000586417 USP47Q96K76 1375 aa28.72■■■□□ 2.19
ATG4D-204ENST00000586417 MYOM2P54296 1465 aa28.72■■■□□ 2.19
ATG4D-204ENST00000586417 SLIT1O75093 1534 aa28.7■■■□□ 2.19
ATG4D-204ENST00000586417 ARHGAP23Q9P227 1491 aa28.7■■■□□ 2.18
ATG4D-204ENST00000586417 LTKP29376 864 aa28.7■■■□□ 2.18
ATG4D-204ENST00000586417 VGFO15240 615 aaPredicted RBP28.69■■■□□ 2.18
ATG4D-204ENST00000586417 WASHC2AQ641Q2 1341 aa28.69■■■□□ 2.18
ATG4D-204ENST00000586417 STAC3Q96MF2 364 aa28.67■■■□□ 2.18
ATG4D-204ENST00000586417 GPRASP1Q5JY77 1395 aa28.67■■■□□ 2.18
ATG4D-204ENST00000586417 NRXN1Q9ULB1 1477 aa28.67■■■□□ 2.18
ATG4D-204ENST00000586417 CARD11Q9BXL7 1154 aa28.67■■■□□ 2.18
ATG4D-204ENST00000586417 LMTK3Q96Q04 1460 aa28.66■■■□□ 2.18
ATG4D-204ENST00000586417 ROCK2O75116 1388 aaKnown RBP28.66■■■□□ 2.18
ATG4D-204ENST00000586417 LAMC1P11047 1609 aa28.66■■■□□ 2.18
ATG4D-204ENST00000586417 TXNDC2Q86VQ3 553 aa28.65■■■□□ 2.18
ATG4D-204ENST00000586417 POLR1AO95602 1720 aaPredicted RBP28.65■■■□□ 2.18
ATG4D-204ENST00000586417 C11orf95C9JLR9 678 aaPredicted RBP28.64■■■□□ 2.18
ATG4D-204ENST00000586417 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.64■■■□□ 2.18
ATG4D-204ENST00000586417 PIK3C2GO75747 1445 aa28.63■■■□□ 2.17
ATG4D-204ENST00000586417 HSPA2P54652 639 aa28.63■■■□□ 2.17
ATG4D-204ENST00000586417 HDGFP51858 240 aaKnown RBP28.61■■■□□ 2.17
ATG4D-204ENST00000586417 EID1Q9Y6B2 187 aa28.61■■■□□ 2.17
ATG4D-204ENST00000586417 CCDC7Q96M83 1385 aa28.61■■■□□ 2.17
ATG4D-204ENST00000586417 NBPF1Q3BBV0 1214 aa28.6■■■□□ 2.17
ATG4D-204ENST00000586417 CFAP70Q5T0N1 1121 aa28.6■■■□□ 2.17
ATG4D-204ENST00000586417 SCAF11Q99590 1463 aaKnown RBP28.59■■■□□ 2.17
ATG4D-204ENST00000586417 ANKLE2Q86XL3 938 aa28.57■■■□□ 2.16
ATG4D-204ENST00000586417 NRXN3Q9Y4C0 1643 aa28.56■■■□□ 2.16
ATG4D-204ENST00000586417 IQGAP1P46940 1657 aa28.55■■■□□ 2.16
ATG4D-204ENST00000586417 C14orf93Q9H972 538 aaKnown RBP28.55■■■□□ 2.16
ATG4D-204ENST00000586417 PLEKHG1Q9ULL1 1385 aa28.54■■■□□ 2.16
ATG4D-204ENST00000586417 KIF7Q2M1P5 1343 aa28.54■■■□□ 2.16
ATG4D-204ENST00000586417 NCKAP5LQ9HCH0 1330 aa28.53■■■□□ 2.16
ATG4D-204ENST00000586417 KIAA1210Q9ULL0 1709 aa28.53■■■□□ 2.16
ATG4D-204ENST00000586417 BCANQ96GW7 911 aa28.52■■■□□ 2.16
ATG4D-204ENST00000586417 ALKQ9UM73 1620 aa28.52■■■□□ 2.16
ATG4D-204ENST00000586417 SETBP1Q9Y6X0 1596 aa28.52■■■□□ 2.16
ATG4D-204ENST00000586417 ST20-MTHFSA0A0A6YYL1 179 aa28.5■■■□□ 2.15
ATG4D-204ENST00000586417 SETD1AO15047 1707 aaKnown RBP28.49■■■□□ 2.15
ATG4D-204ENST00000586417 TMEM132EQ6IEE7 984 aa28.49■■■□□ 2.15
ATG4D-204ENST00000586417 ADAMTS13Q76LX8 1427 aa28.48■■■□□ 2.15
ATG4D-204ENST00000586417 SLC26A8Q96RN1 970 aa28.47■■■□□ 2.15
ATG4D-204ENST00000586417 ASXL1Q8IXJ9 1541 aa28.46■■■□□ 2.15
ATG4D-204ENST00000586417 ADGRB1O14514 1584 aa28.46■■■□□ 2.15
ATG4D-204ENST00000586417 STRCQ7RTU9 1775 aa28.45■■■□□ 2.15
ATG4D-204ENST00000586417 MED14O60244 1454 aa28.44■■■□□ 2.14
ATG4D-204ENST00000586417 NPHP4O75161 1426 aaPredicted RBP28.43■■■□□ 2.14
ATG4D-204ENST00000586417 METP08581 1390 aa28.43■■■□□ 2.14
ATG4D-204ENST00000586417 AEBP2Q6ZN18 517 aaPredicted RBP28.37■■■□□ 2.13
ATG4D-204ENST00000586417 TBX22Q9Y458 520 aa28.37■■■□□ 2.13
ATG4D-204ENST00000586417 ANP32CO43423 234 aa28.37■■■□□ 2.13
ATG4D-204ENST00000586417 TESK2Q96S53 571 aa28.36■■■□□ 2.13
ATG4D-204ENST00000586417 STK26Q9P289 416 aa28.36■■■□□ 2.13
ATG4D-204ENST00000586417 DIP2AQ14689 1571 aa28.35■■■□□ 2.13
ATG4D-204ENST00000586417 TRAK1Q9UPV9 953 aa28.34■■■□□ 2.13
ATG4D-204ENST00000586417 YTHDC2Q9H6S0 1430 aaKnown RBP28.33■■■□□ 2.13
ATG4D-204ENST00000586417 PTPRUQ92729 1446 aa28.32■■■□□ 2.12
ATG4D-204ENST00000586417 LRPPRCP42704 1394 aaKnown RBP28.28■■■□□ 2.12
ATG4D-204ENST00000586417 DISP3Q9P2K9 1392 aa28.27■■■□□ 2.12
ATG4D-204ENST00000586417 ARHGEF28Q8N1W1 1705 aaKnown RBP28.27■■■□□ 2.12
ATG4D-204ENST00000586417 CCER2I3L3R5 266 aa28.26■■■□□ 2.11
ATG4D-204ENST00000586417 POLR3GLQ9BT43 218 aa28.26■■■□□ 2.11
ATG4D-204ENST00000586417 CHD2O14647 1828 aaKnown RBP28.25■■■□□ 2.11
ATG4D-204ENST00000586417 YTHDC1Q96MU7 727 aaKnown RBP28.24■■■□□ 2.11
ATG4D-204ENST00000586417 AMOTL2Q9Y2J4 779 aa28.24■■■□□ 2.11
ATG4D-204ENST00000586417 EIF3AQ14152 1382 aaKnown RBP28.24■■■□□ 2.11
ATG4D-204ENST00000586417 ABCC11Q96J66 1382 aa28.24■■■□□ 2.11
ATG4D-204ENST00000586417 PIK3R4Q99570 1358 aa28.22■■■□□ 2.11
ATG4D-204ENST00000586417 KNDC1Q76NI1 1749 aa28.21■■■□□ 2.11
ATG4D-204ENST00000586417 XRN1Q8IZH2 1706 aaKnown RBP28.21■■■□□ 2.11
ATG4D-204ENST00000586417 TMF1P82094 1093 aa28.2■■■□□ 2.11
ATG4D-204ENST00000586417 TECPR2O15040 1411 aa28.2■■■□□ 2.1
ATG4D-204ENST00000586417 ROBO2Q9HCK4 1378 aa28.19■■■□□ 2.1
ATG4D-204ENST00000586417 KCNA6P17658 529 aa28.19■■■□□ 2.1
ATG4D-204ENST00000586417 WAPLQ7Z5K2 1190 aa28.19■■■□□ 2.1
ATG4D-204ENST00000586417 PRAM1Q96QH2 718 aa28.19■■■□□ 2.1
ATG4D-204ENST00000586417 SAFB2Q14151 953 aaKnown RBP eCLIP28.19■■■□□ 2.1
ATG4D-204ENST00000586417 DLC1Q96QB1 1528 aa28.18■■■□□ 2.1
ATG4D-204ENST00000586417 PLEKHH1Q9ULM0 1364 aa28.18■■■□□ 2.1
ATG4D-204ENST00000586417 CPS1P31327 1500 aa28.18■■■□□ 2.1
ATG4D-204ENST00000586417 CENPJQ9HC77 1338 aaPredicted RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 547.5 ms