RNA–Protein interactions for RNA: ENST00000586080.1

R3HDM4-202, Transcript of R3H domain containing 4, humanhuman

TSL 4

Gene R3HDM4, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-202ENST00000586080 RAB3GAP2Q9H2M9 1393 aa32.25■■■□□ 2.75
R3HDM4-202ENST00000586080 FOXD1Q16676 465 aa32.25■■■□□ 2.75
R3HDM4-202ENST00000586080 NUTM2DQ5VT03 806 aaPredicted RBP32.25■■■□□ 2.75
R3HDM4-202ENST00000586080 MYO5BQ9ULV0 1848 aa32.25■■■□□ 2.75
R3HDM4-202ENST00000586080 CPS1P31327 1500 aa32.25■■■□□ 2.75
R3HDM4-202ENST00000586080 IQSEC2Q5JU85 1478 aa32.24■■■□□ 2.75
R3HDM4-202ENST00000586080 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.24■■■□□ 2.75
R3HDM4-202ENST00000586080 ZNF326Q5BKZ1 582 aaKnown RBP32.23■■■□□ 2.75
R3HDM4-202ENST00000586080 SLC26A8Q96RN1 970 aa32.23■■■□□ 2.75
R3HDM4-202ENST00000586080 MPHOSPH9Q99550 1183 aa32.23■■■□□ 2.75
R3HDM4-202ENST00000586080 CLTCL1P53675 1640 aa32.22■■■□□ 2.75
R3HDM4-202ENST00000586080 ACIN1Q9UKV3 1341 aaKnown RBP32.2■■■□□ 2.74
R3HDM4-202ENST00000586080 PLEKHG1Q9ULL1 1385 aa32.19■■■□□ 2.74
R3HDM4-202ENST00000586080 UBAP1LF5GYI3 381 aa32.12■■■□□ 2.73
R3HDM4-202ENST00000586080 STRCP1A6NGW2 1772 aa32.09■■■□□ 2.73
R3HDM4-202ENST00000586080 CCDC144AA2RUR9 1427 aa32.09■■■□□ 2.73
R3HDM4-202ENST00000586080 LRRC7Q96NW7 1537 aa32.08■■■□□ 2.73
R3HDM4-202ENST00000586080 KCNA6P17658 529 aa32.06■■■□□ 2.72
R3HDM4-202ENST00000586080 KIF1BO60333 1816 aa32.05■■■□□ 2.72
R3HDM4-202ENST00000586080 ADAMTS13Q76LX8 1427 aa32.02■■■□□ 2.72
R3HDM4-202ENST00000586080 TBX22Q9Y458 520 aa32.02■■■□□ 2.72
R3HDM4-202ENST00000586080 NEXMIFQ5QGS0 1516 aa32.01■■■□□ 2.72
R3HDM4-202ENST00000586080 SCAF1Q9H7N4 1312 aaKnown RBP31.99■■■□□ 2.71
R3HDM4-202ENST00000586080 TOM1O60784 492 aa31.98■■■□□ 2.71
R3HDM4-202ENST00000586080 DIP2AQ14689 1571 aa31.98■■■□□ 2.71
R3HDM4-202ENST00000586080 HRCP23327 699 aa31.97■■■□□ 2.71
R3HDM4-202ENST00000586080 PROSER2Q86WR7 435 aaPredicted RBP31.97■■■□□ 2.71
R3HDM4-202ENST00000586080 NWD1Q149M9 1564 aa31.96■■■□□ 2.71
R3HDM4-202ENST00000586080 TMEM94Q12767 1356 aa31.95■■■□□ 2.71
R3HDM4-202ENST00000586080 PIP4K2BP78356 416 aa31.95■■■□□ 2.71
R3HDM4-202ENST00000586080 RGL3Q3MIN7 710 aa31.95■■■□□ 2.71
R3HDM4-202ENST00000586080 NKTRP30414 1462 aaKnown RBP31.95■■■□□ 2.7
R3HDM4-202ENST00000586080 RPGRIP1LQ68CZ1 1315 aa31.95■■■□□ 2.7
R3HDM4-202ENST00000586080 RBM33Q96EV2 1170 aaKnown RBP31.94■■■□□ 2.7
R3HDM4-202ENST00000586080 VGFO15240 615 aaPredicted RBP31.93■■■□□ 2.7
R3HDM4-202ENST00000586080 SETBP1Q9Y6X0 1596 aa31.93■■■□□ 2.7
R3HDM4-202ENST00000586080 PIK3R4Q99570 1358 aa31.9■■■□□ 2.7
R3HDM4-202ENST00000586080 NRXN3Q9Y4C0 1643 aa31.89■■■□□ 2.7
R3HDM4-202ENST00000586080 SPATA31E1Q6ZUB1 1445 aa31.89■■■□□ 2.7
R3HDM4-202ENST00000586080 CHD2O14647 1828 aaKnown RBP31.85■■■□□ 2.69
R3HDM4-202ENST00000586080 AMOTL2Q9Y2J4 779 aa31.85■■■□□ 2.69
R3HDM4-202ENST00000586080 PTPRUQ92729 1446 aa31.84■■■□□ 2.69
R3HDM4-202ENST00000586080 METP08581 1390 aa31.83■■■□□ 2.69
R3HDM4-202ENST00000586080 ANKRD30BQ9BXX2 1392 aa31.82■■■□□ 2.69
R3HDM4-202ENST00000586080 C14orf37Q86TY3 774 aa31.81■■■□□ 2.68
R3HDM4-202ENST00000586080 XIRP1Q702N8 1843 aaKnown RBP31.81■■■□□ 2.68
R3HDM4-202ENST00000586080 ALKQ9UM73 1620 aa31.81■■■□□ 2.68
R3HDM4-202ENST00000586080 PPLO60437 1756 aa31.81■■■□□ 2.68
R3HDM4-202ENST00000586080 MSH6P52701 1360 aa31.79■■■□□ 2.68
R3HDM4-202ENST00000586080 ADGRF5Q8IZF2 1346 aa31.78■■■□□ 2.68
R3HDM4-202ENST00000586080 XRN1Q8IZH2 1706 aaKnown RBP31.72■■■□□ 2.67
R3HDM4-202ENST00000586080 HSPA1LP34931 641 aa31.71■■■□□ 2.67
R3HDM4-202ENST00000586080 NCOA3Q9Y6Q9 1424 aa31.7■■■□□ 2.67
R3HDM4-202ENST00000586080 IFT172Q9UG01 1749 aa31.69■■■□□ 2.66
R3HDM4-202ENST00000586080 TRIM26Q12899 539 aaPredicted RBP31.68■■■□□ 2.66
R3HDM4-202ENST00000586080 SETD1AO15047 1707 aaKnown RBP31.65■■■□□ 2.66
R3HDM4-202ENST00000586080 PIK3C2GO75747 1445 aa31.65■■■□□ 2.66
R3HDM4-202ENST00000586080 C19orf44Q9H6X5 657 aa31.63■■■□□ 2.65
R3HDM4-202ENST00000586080 MYOM2P54296 1465 aa31.63■■■□□ 2.65
R3HDM4-202ENST00000586080 ATF3P18847 181 aa31.62■■■□□ 2.65
R3HDM4-202ENST00000586080 SLAIN2Q9P270 581 aa31.6■■■□□ 2.65
R3HDM4-202ENST00000586080 PTCH1Q13635 1447 aa31.59■■■□□ 2.65
R3HDM4-202ENST00000586080 ROBO2Q9HCK4 1378 aa31.59■■■□□ 2.65
R3HDM4-202ENST00000586080 CADPS2Q86UW7 1296 aa31.59■■■□□ 2.65
R3HDM4-202ENST00000586080 KDM2AQ9Y2K7 1162 aa31.59■■■□□ 2.65
R3HDM4-202ENST00000586080 FAM135BQ49AJ0 1406 aa31.58■■■□□ 2.65
R3HDM4-202ENST00000586080 DCAF11Q8TEB1 546 aa31.58■■■□□ 2.65
R3HDM4-202ENST00000586080 STK26Q9P289 416 aa31.58■■■□□ 2.65
R3HDM4-202ENST00000586080 TMEM132EQ6IEE7 984 aa31.57■■■□□ 2.64
R3HDM4-202ENST00000586080 NRXN1Q9ULB1 1477 aa31.57■■■□□ 2.64
R3HDM4-202ENST00000586080 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.55■■■□□ 2.64
R3HDM4-202ENST00000586080 CFAP70Q5T0N1 1121 aa31.54■■■□□ 2.64
R3HDM4-202ENST00000586080 ADGRL3Q9HAR2 1447 aa31.54■■■□□ 2.64
R3HDM4-202ENST00000586080 C14orf93Q9H972 538 aaKnown RBP31.53■■■□□ 2.64
R3HDM4-202ENST00000586080 ASXL1Q8IXJ9 1541 aa31.53■■■□□ 2.64
R3HDM4-202ENST00000586080 DCCP43146 1447 aa31.52■■■□□ 2.64
R3HDM4-202ENST00000586080 PRAG1Q86YV5 1406 aa31.52■■■□□ 2.64
R3HDM4-202ENST00000586080 ROBO1Q9Y6N7 1651 aa31.52■■■□□ 2.64
R3HDM4-202ENST00000586080 LRPPRCP42704 1394 aaKnown RBP31.52■■■□□ 2.64
R3HDM4-202ENST00000586080 DHX57Q6P158 1386 aaKnown RBP31.5■■■□□ 2.63
R3HDM4-202ENST00000586080 YTHDC2Q9H6S0 1430 aaKnown RBP31.48■■■□□ 2.63
R3HDM4-202ENST00000586080 NALCNQ8IZF0 1738 aa31.46■■■□□ 2.63
R3HDM4-202ENST00000586080 LAMC1P11047 1609 aa31.46■■■□□ 2.63
R3HDM4-202ENST00000586080 ABCC11Q96J66 1382 aa31.45■■■□□ 2.63
R3HDM4-202ENST00000586080 TECPR2O15040 1411 aa31.45■■■□□ 2.63
R3HDM4-202ENST00000586080 STAC3Q96MF2 364 aa31.45■■■□□ 2.63
R3HDM4-202ENST00000586080 WAPLQ7Z5K2 1190 aa31.43■■■□□ 2.62
R3HDM4-202ENST00000586080 MST1RQ04912 1400 aa31.42■■■□□ 2.62
R3HDM4-202ENST00000586080 DISP3Q9P2K9 1392 aa31.42■■■□□ 2.62
R3HDM4-202ENST00000586080 SIN3AQ96ST3 1273 aa31.4■■■□□ 2.62
R3HDM4-202ENST00000586080 NEUROD1Q13562 356 aa31.39■■■□□ 2.62
R3HDM4-202ENST00000586080 PLEKHH1Q9ULM0 1364 aa31.39■■■□□ 2.62
R3HDM4-202ENST00000586080 BRINP3Q76B58 766 aa31.38■■■□□ 2.61
R3HDM4-202ENST00000586080 KNDC1Q76NI1 1749 aa31.38■■■□□ 2.61
R3HDM4-202ENST00000586080 ADGRB1O14514 1584 aa31.33■■■□□ 2.61
R3HDM4-202ENST00000586080 SAFB2Q14151 953 aaKnown RBP eCLIP31.32■■■□□ 2.6
R3HDM4-202ENST00000586080 PRAM1Q96QH2 718 aa31.32■■■□□ 2.6
R3HDM4-202ENST00000586080 TRAK1Q9UPV9 953 aa31.32■■■□□ 2.6
R3HDM4-202ENST00000586080 C1orf167Q5SNV9 1468 aa31.32■■■□□ 2.6
R3HDM4-202ENST00000586080 PHLPP1O60346 1717 aa31.32■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms