RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.16■■■□□ 2.1
ATG4D-203ENST00000585752 TMEM131LA2VDJ0 1609 aa28.16■■■□□ 2.1
ATG4D-203ENST00000585752 SENP3Q9H4L4 574 aaPredicted RBP28.14■■■□□ 2.1
ATG4D-203ENST00000585752 RIMS2Q9UQ26 1411 aa28.14■■■□□ 2.1
ATG4D-203ENST00000585752 KCNA6P17658 529 aa28.11■■■□□ 2.09
ATG4D-203ENST00000585752 TRIM52Q96A61 297 aa28.11■■■□□ 2.09
ATG4D-203ENST00000585752 SPHKAPQ2M3C7 1700 aa28.11■■■□□ 2.09
ATG4D-203ENST00000585752 PROSER2Q86WR7 435 aaPredicted RBP28.08■■■□□ 2.09
ATG4D-203ENST00000585752 HSPA1LP34931 641 aa28.07■■■□□ 2.08
ATG4D-203ENST00000585752 PLEKHG1Q9ULL1 1385 aa28.07■■■□□ 2.08
ATG4D-203ENST00000585752 XIRP1Q702N8 1843 aaKnown RBP28.06■■■□□ 2.08
ATG4D-203ENST00000585752 ZFYVE9O95405 1425 aa28.06■■■□□ 2.08
ATG4D-203ENST00000585752 NAIPQ13075 1403 aa28.06■■■□□ 2.08
ATG4D-203ENST00000585752 NUTM2DQ5VT03 806 aaPredicted RBP28.05■■■□□ 2.08
ATG4D-203ENST00000585752 ZNF326Q5BKZ1 582 aaKnown RBP28.04■■■□□ 2.08
ATG4D-203ENST00000585752 CHD2O14647 1828 aaKnown RBP28.01■■■□□ 2.07
ATG4D-203ENST00000585752 KIF1BO60333 1816 aa28■■■□□ 2.07
ATG4D-203ENST00000585752 HFM1A2PYH4 1435 aa28■■■□□ 2.07
ATG4D-203ENST00000585752 TMEM94Q12767 1356 aa27.99■■■□□ 2.07
ATG4D-203ENST00000585752 NKTRP30414 1462 aaKnown RBP27.98■■■□□ 2.07
ATG4D-203ENST00000585752 TBX22Q9Y458 520 aa27.98■■■□□ 2.07
ATG4D-203ENST00000585752 NWD1Q149M9 1564 aa27.97■■■□□ 2.07
ATG4D-203ENST00000585752 ALKQ9UM73 1620 aa27.96■■■□□ 2.07
ATG4D-203ENST00000585752 RBM33Q96EV2 1170 aaKnown RBP27.95■■■□□ 2.06
ATG4D-203ENST00000585752 SLC4A1APQ9BWU0 796 aaKnown RBP27.95■■■□□ 2.06
ATG4D-203ENST00000585752 C14orf37Q86TY3 774 aa27.94■■■□□ 2.06
ATG4D-203ENST00000585752 DIP2AQ14689 1571 aa27.94■■■□□ 2.06
ATG4D-203ENST00000585752 MSH6P52701 1360 aa27.93■■■□□ 2.06
ATG4D-203ENST00000585752 TRPM2O94759 1503 aa27.9■■■□□ 2.06
ATG4D-203ENST00000585752 CLTCL1P53675 1640 aa27.89■■■□□ 2.06
ATG4D-203ENST00000585752 PIK3R4Q99570 1358 aa27.87■■■□□ 2.05
ATG4D-203ENST00000585752 ADAMTS13Q76LX8 1427 aa27.86■■■□□ 2.05
ATG4D-203ENST00000585752 PHF23Q9BUL5 403 aaPredicted RBP27.83■■■□□ 2.05
ATG4D-203ENST00000585752 FAM135BQ49AJ0 1406 aa27.83■■■□□ 2.05
ATG4D-203ENST00000585752 MED1Q15648 1581 aaPredicted RBP27.82■■■□□ 2.04
ATG4D-203ENST00000585752 ILDR2Q71H61 639 aa27.82■■■□□ 2.04
ATG4D-203ENST00000585752 AMOTL2Q9Y2J4 779 aa27.82■■■□□ 2.04
ATG4D-203ENST00000585752 ROBO1Q9Y6N7 1651 aa27.81■■■□□ 2.04
ATG4D-203ENST00000585752 ACIN1Q9UKV3 1341 aaKnown RBP27.81■■■□□ 2.04
ATG4D-203ENST00000585752 NCOA3Q9Y6Q9 1424 aa27.8■■■□□ 2.04
ATG4D-203ENST00000585752 SLAIN2Q9P270 581 aa27.79■■■□□ 2.04
ATG4D-203ENST00000585752 VGFO15240 615 aaPredicted RBP27.78■■■□□ 2.04
ATG4D-203ENST00000585752 ATF3P18847 181 aa27.78■■■□□ 2.04
ATG4D-203ENST00000585752 SETBP1Q9Y6X0 1596 aa27.77■■■□□ 2.04
ATG4D-203ENST00000585752 NEXMIFQ5QGS0 1516 aa27.77■■■□□ 2.04
ATG4D-203ENST00000585752 CADPS2Q86UW7 1296 aa27.75■■■□□ 2.03
ATG4D-203ENST00000585752 NRXN3Q9Y4C0 1643 aa27.74■■■□□ 2.03
ATG4D-203ENST00000585752 C19orf44Q9H6X5 657 aa27.74■■■□□ 2.03
ATG4D-203ENST00000585752 RPGRIP1LQ68CZ1 1315 aa27.73■■■□□ 2.03
ATG4D-203ENST00000585752 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.73■■■□□ 2.03
ATG4D-203ENST00000585752 FOXD1Q16676 465 aa27.73■■■□□ 2.03
ATG4D-203ENST00000585752 MPHOSPH9Q99550 1183 aa27.73■■■□□ 2.03
ATG4D-203ENST00000585752 PHLPP1O60346 1717 aa27.7■■■□□ 2.03
ATG4D-203ENST00000585752 CCDC144AA2RUR9 1427 aa27.7■■■□□ 2.03
ATG4D-203ENST00000585752 PTPRUQ92729 1446 aa27.69■■■□□ 2.02
ATG4D-203ENST00000585752 SOCS7O14512 581 aa27.69■■■□□ 2.02
ATG4D-203ENST00000585752 PPLO60437 1756 aa27.68■■■□□ 2.02
ATG4D-203ENST00000585752 SETD5Q9C0A6 1442 aa27.68■■■□□ 2.02
ATG4D-203ENST00000585752 XRN1Q8IZH2 1706 aaKnown RBP27.67■■■□□ 2.02
ATG4D-203ENST00000585752 METP08581 1390 aa27.66■■■□□ 2.02
ATG4D-203ENST00000585752 RGL3Q3MIN7 710 aa27.63■■■□□ 2.01
ATG4D-203ENST00000585752 DCCP43146 1447 aa27.58■■■□□ 2
ATG4D-203ENST00000585752 RAB3GAP2Q9H2M9 1393 aa27.55■■■□□ 2
ATG4D-203ENST00000585752 JCADQ9P266 1359 aa27.55■■■□□ 2
ATG4D-203ENST00000585752 SETD1AO15047 1707 aaKnown RBP27.54■■■□□ 2
ATG4D-203ENST00000585752 ANKRD30BQ9BXX2 1392 aa27.53■■■□□ 2
ATG4D-203ENST00000585752 ADGRL3Q9HAR2 1447 aa27.51■■□□□ 1.99
ATG4D-203ENST00000585752 NALCNQ8IZF0 1738 aa27.5■■□□□ 1.99
ATG4D-203ENST00000585752 IFT172Q9UG01 1749 aa27.5■■□□□ 1.99
ATG4D-203ENST00000585752 COL16A1Q07092 1604 aaPredicted RBP27.49■■□□□ 1.99
ATG4D-203ENST00000585752 BRINP3Q76B58 766 aa27.49■■□□□ 1.99
ATG4D-203ENST00000585752 PTCH1Q13635 1447 aa27.49■■□□□ 1.99
ATG4D-203ENST00000585752 SPATA31E1Q6ZUB1 1445 aa27.48■■□□□ 1.99
ATG4D-203ENST00000585752 AHDC1Q5TGY3 1603 aaPredicted RBP27.48■■□□□ 1.99
ATG4D-203ENST00000585752 ADGRF5Q8IZF2 1346 aa27.47■■□□□ 1.99
ATG4D-203ENST00000585752 TRIM26Q12899 539 aaPredicted RBP27.46■■□□□ 1.99
ATG4D-203ENST00000585752 MEX3CQ5U5Q3 659 aaKnown RBP27.46■■□□□ 1.99
ATG4D-203ENST00000585752 MST1RQ04912 1400 aa27.46■■□□□ 1.99
ATG4D-203ENST00000585752 STK26Q9P289 416 aa27.44■■□□□ 1.98
ATG4D-203ENST00000585752 ASXL1Q8IXJ9 1541 aa27.44■■□□□ 1.98
ATG4D-203ENST00000585752 SPATA31A6Q5VVP1 1343 aa27.43■■□□□ 1.98
ATG4D-203ENST00000585752 ROBO2Q9HCK4 1378 aa27.43■■□□□ 1.98
ATG4D-203ENST00000585752 SHPRHQ149N8 1683 aa27.4■■□□□ 1.98
ATG4D-203ENST00000585752 LRRC59Q96AG4 307 aaKnown RBP27.39■■□□□ 1.98
ATG4D-203ENST00000585752 NHSL1Q5SYE7 1610 aa27.38■■□□□ 1.97
ATG4D-203ENST00000585752 HRCP23327 699 aa27.37■■□□□ 1.97
ATG4D-203ENST00000585752 RGS17Q9UGC6 210 aaPredicted RBP27.37■■□□□ 1.97
ATG4D-203ENST00000585752 PRAG1Q86YV5 1406 aa27.36■■□□□ 1.97
ATG4D-203ENST00000585752 TMEM132EQ6IEE7 984 aa27.36■■□□□ 1.97
ATG4D-203ENST00000585752 C1orf167Q5SNV9 1468 aa27.36■■□□□ 1.97
ATG4D-203ENST00000585752 PIK3C2GO75747 1445 aa27.35■■□□□ 1.97
ATG4D-203ENST00000585752 NUTM2BA6NNL0 878 aaPredicted RBP27.35■■□□□ 1.97
ATG4D-203ENST00000585752 NUTM2EB1AL46 878 aaPredicted RBP27.35■■□□□ 1.97
ATG4D-203ENST00000585752 NUTM2AQ8IVF1 878 aaPredicted RBP27.35■■□□□ 1.97
ATG4D-203ENST00000585752 LRPPRCP42704 1394 aaKnown RBP27.34■■□□□ 1.97
ATG4D-203ENST00000585752 KNDC1Q76NI1 1749 aa27.33■■□□□ 1.97
ATG4D-203ENST00000585752 LAMC1P11047 1609 aa27.33■■□□□ 1.97
ATG4D-203ENST00000585752 DHX57Q6P158 1386 aaKnown RBP27.32■■□□□ 1.96
ATG4D-203ENST00000585752 WAPLQ7Z5K2 1190 aa27.3■■□□□ 1.96
ATG4D-203ENST00000585752 DDX17Q92841 729 aaKnown RBP27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms