RNA–Protein interactions for RNA: ENST00000585420.5

GCDH-203, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,730 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-203ENST00000585420 RIMS2Q9UQ26 1411 aa24.42■■□□□ 1.5
GCDH-203ENST00000585420 NUTM2DQ5VT03 806 aaPredicted RBP24.41■■□□□ 1.5
GCDH-203ENST00000585420 IQGAP1P46940 1657 aa24.4■■□□□ 1.5
GCDH-203ENST00000585420 CCDC144AA2RUR9 1427 aa24.39■■□□□ 1.49
GCDH-203ENST00000585420 ZNF326Q5BKZ1 582 aaKnown RBP24.38■■□□□ 1.49
GCDH-203ENST00000585420 ZNF335Q9H4Z2 1342 aaPredicted RBP24.38■■□□□ 1.49
GCDH-203ENST00000585420 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
GCDH-203ENST00000585420 HDGFP51858 240 aaKnown RBP24.37■■□□□ 1.49
GCDH-203ENST00000585420 KIF1BO60333 1816 aa24.36■■□□□ 1.49
GCDH-203ENST00000585420 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
GCDH-203ENST00000585420 CLSPNQ9HAW4 1339 aa24.35■■□□□ 1.49
GCDH-203ENST00000585420 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.35■■□□□ 1.49
GCDH-203ENST00000585420 ANKRD30BQ9BXX2 1392 aa24.33■■□□□ 1.49
GCDH-203ENST00000585420 BCANQ96GW7 911 aa24.32■■□□□ 1.48
GCDH-203ENST00000585420 LTBP4Q8N2S1 1624 aa24.31■■□□□ 1.48
GCDH-203ENST00000585420 PLEKHG1Q9ULL1 1385 aa24.31■■□□□ 1.48
GCDH-203ENST00000585420 SLC26A8Q96RN1 970 aa24.31■■□□□ 1.48
GCDH-203ENST00000585420 RGL3Q3MIN7 710 aa24.3■■□□□ 1.48
GCDH-203ENST00000585420 NEXMIFQ5QGS0 1516 aa24.29■■□□□ 1.48
GCDH-203ENST00000585420 SPATA31E1Q6ZUB1 1445 aa24.28■■□□□ 1.48
GCDH-203ENST00000585420 CERKQ8TCT0 537 aa24.27■■□□□ 1.48
GCDH-203ENST00000585420 RPGRIP1LQ68CZ1 1315 aa24.25■■□□□ 1.47
GCDH-203ENST00000585420 ADAMTS13Q76LX8 1427 aa24.22■■□□□ 1.47
GCDH-203ENST00000585420 SIN3AQ96ST3 1273 aa24.22■■□□□ 1.47
GCDH-203ENST00000585420 VGFO15240 615 aaPredicted RBP24.21■■□□□ 1.47
GCDH-203ENST00000585420 NEUROD1Q13562 356 aa24.21■■□□□ 1.47
GCDH-203ENST00000585420 TBX22Q9Y458 520 aa24.21■■□□□ 1.47
GCDH-203ENST00000585420 STRCP1A6NGW2 1772 aa24.2■■□□□ 1.46
GCDH-203ENST00000585420 ZEB1P37275 1124 aaPredicted RBP24.2■■□□□ 1.46
GCDH-203ENST00000585420 PPLO60437 1756 aa24.18■■□□□ 1.46
GCDH-203ENST00000585420 NRXN3Q9Y4C0 1643 aa24.18■■□□□ 1.46
GCDH-203ENST00000585420 SETBP1Q9Y6X0 1596 aa24.17■■□□□ 1.46
GCDH-203ENST00000585420 CPS1P31327 1500 aa24.17■■□□□ 1.46
GCDH-203ENST00000585420 KCNA6P17658 529 aa24.15■■□□□ 1.46
GCDH-203ENST00000585420 ADGRF5Q8IZF2 1346 aa24.15■■□□□ 1.46
GCDH-203ENST00000585420 DIP2AQ14689 1571 aa24.14■■□□□ 1.45
GCDH-203ENST00000585420 IFT172Q9UG01 1749 aa24.13■■□□□ 1.45
GCDH-203ENST00000585420 LRRC7Q96NW7 1537 aa24.11■■□□□ 1.45
GCDH-203ENST00000585420 METP08581 1390 aa24.1■■□□□ 1.45
GCDH-203ENST00000585420 PIK3R4Q99570 1358 aa24.09■■□□□ 1.45
GCDH-203ENST00000585420 CHD2O14647 1828 aaKnown RBP24.09■■□□□ 1.45
GCDH-203ENST00000585420 IQSEC2Q5JU85 1478 aa24.09■■□□□ 1.45
GCDH-203ENST00000585420 PTPRUQ92729 1446 aa24.09■■□□□ 1.45
GCDH-203ENST00000585420 NWD1Q149M9 1564 aa24.08■■□□□ 1.45
GCDH-203ENST00000585420 RBM33Q96EV2 1170 aaKnown RBP24.07■■□□□ 1.44
GCDH-203ENST00000585420 ALKQ9UM73 1620 aa24.07■■□□□ 1.44
GCDH-203ENST00000585420 DCAF11Q8TEB1 546 aa24.07■■□□□ 1.44
GCDH-203ENST00000585420 AMOTL2Q9Y2J4 779 aa24.07■■□□□ 1.44
GCDH-203ENST00000585420 FBXO41Q8TF61 875 aa24.06■■□□□ 1.44
GCDH-203ENST00000585420 TONSLQ96HA7 1378 aa24.06■■□□□ 1.44
GCDH-203ENST00000585420 PIK3C2GO75747 1445 aa24.05■■□□□ 1.44
GCDH-203ENST00000585420 PROSER2Q86WR7 435 aaPredicted RBP24.05■■□□□ 1.44
GCDH-203ENST00000585420 KDM2AQ9Y2K7 1162 aa24.05■■□□□ 1.44
GCDH-203ENST00000585420 MYOM2P54296 1465 aa24.04■■□□□ 1.44
GCDH-203ENST00000585420 TMEM94Q12767 1356 aa24.04■■□□□ 1.44
GCDH-203ENST00000585420 NKTRP30414 1462 aaKnown RBP24.04■■□□□ 1.44
GCDH-203ENST00000585420 SETD1AO15047 1707 aaKnown RBP24.03■■□□□ 1.44
GCDH-203ENST00000585420 NRXN1Q9ULB1 1477 aa24.03■■□□□ 1.44
GCDH-203ENST00000585420 ILDR1Q86SU0 546 aaPredicted RBP24.03■■□□□ 1.44
GCDH-203ENST00000585420 TIMELESSQ9UNS1 1208 aa24.01■■□□□ 1.43
GCDH-203ENST00000585420 XIRP1Q702N8 1843 aaKnown RBP23.99■■□□□ 1.43
GCDH-203ENST00000585420 UBAP1LF5GYI3 381 aa23.98■■□□□ 1.43
GCDH-203ENST00000585420 CFAP70Q5T0N1 1121 aa23.98■■□□□ 1.43
GCDH-203ENST00000585420 C14orf93Q9H972 538 aaKnown RBP23.98■■□□□ 1.43
GCDH-203ENST00000585420 TMEM132EQ6IEE7 984 aa23.98■■□□□ 1.43
GCDH-203ENST00000585420 XRN1Q8IZH2 1706 aaKnown RBP23.97■■□□□ 1.43
GCDH-203ENST00000585420 STAC3Q96MF2 364 aa23.97■■□□□ 1.43
GCDH-203ENST00000585420 L3MBTL2Q969R5 705 aa23.95■■□□□ 1.42
GCDH-203ENST00000585420 ASXL1Q8IXJ9 1541 aa23.93■■□□□ 1.42
GCDH-203ENST00000585420 TOM1O60784 492 aa23.92■■□□□ 1.42
GCDH-203ENST00000585420 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
GCDH-203ENST00000585420 STK26Q9P289 416 aa23.91■■□□□ 1.42
GCDH-203ENST00000585420 C14orf37Q86TY3 774 aa23.9■■□□□ 1.42
GCDH-203ENST00000585420 NCOA3Q9Y6Q9 1424 aa23.89■■□□□ 1.42
GCDH-203ENST00000585420 LAMC1P11047 1609 aa23.88■■□□□ 1.41
GCDH-203ENST00000585420 PIP4K2BP78356 416 aa23.88■■□□□ 1.41
GCDH-203ENST00000585420 PTCH1Q13635 1447 aa23.88■■□□□ 1.41
GCDH-203ENST00000585420 LRPPRCP42704 1394 aaKnown RBP23.88■■□□□ 1.41
GCDH-203ENST00000585420 MSH6P52701 1360 aa23.88■■□□□ 1.41
GCDH-203ENST00000585420 PRAG1Q86YV5 1406 aa23.87■■□□□ 1.41
GCDH-203ENST00000585420 YTHDC2Q9H6S0 1430 aaKnown RBP23.87■■□□□ 1.41
GCDH-203ENST00000585420 C19orf44Q9H6X5 657 aa23.86■■□□□ 1.41
GCDH-203ENST00000585420 ABCC11Q96J66 1382 aa23.86■■□□□ 1.41
GCDH-203ENST00000585420 SCAF1Q9H7N4 1312 aaKnown RBP23.85■■□□□ 1.41
GCDH-203ENST00000585420 ADGRB1O14514 1584 aa23.84■■□□□ 1.41
GCDH-203ENST00000585420 TECPR2O15040 1411 aa23.84■■□□□ 1.41
GCDH-203ENST00000585420 WAPLQ7Z5K2 1190 aa23.83■■□□□ 1.41
GCDH-203ENST00000585420 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.81■■□□□ 1.4
GCDH-203ENST00000585420 PLEKHH1Q9ULM0 1364 aa23.8■■□□□ 1.4
GCDH-203ENST00000585420 NBPF1Q3BBV0 1214 aa23.79■■□□□ 1.4
GCDH-203ENST00000585420 KNDC1Q76NI1 1749 aa23.79■■□□□ 1.4
GCDH-203ENST00000585420 ADGRL3Q9HAR2 1447 aa23.79■■□□□ 1.4
GCDH-203ENST00000585420 ATF3P18847 181 aa23.79■■□□□ 1.4
GCDH-203ENST00000585420 CADPS2Q86UW7 1296 aa23.79■■□□□ 1.4
GCDH-203ENST00000585420 TRAK1Q9UPV9 953 aa23.79■■□□□ 1.4
GCDH-203ENST00000585420 SLAIN2Q9P270 581 aa23.78■■□□□ 1.4
GCDH-203ENST00000585420 NALCNQ8IZF0 1738 aa23.78■■□□□ 1.4
GCDH-203ENST00000585420 SIRT1Q96EB6 747 aa23.76■■□□□ 1.39
GCDH-203ENST00000585420 FAM135BQ49AJ0 1406 aa23.75■■□□□ 1.39
GCDH-203ENST00000585420 DCCP43146 1447 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms