RNA–Protein interactions for RNA: ENST00000585388.1

LSM12-202, Transcript of LSM12 homolog, humanhuman

TSL 3 BASIC

Gene LSM12, Length 942 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-202ENST00000585388 ZFYVE9O95405 1425 aa25.13■■□□□ 1.61
LSM12-202ENST00000585388 KCNA6P17658 529 aa25.12■■□□□ 1.61
LSM12-202ENST00000585388 SLC26A8Q96RN1 970 aa25.12■■□□□ 1.61
LSM12-202ENST00000585388 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
LSM12-202ENST00000585388 PLEKHG1Q9ULL1 1385 aa25.1■■□□□ 1.61
LSM12-202ENST00000585388 RIMS2Q9UQ26 1411 aa25.1■■□□□ 1.61
LSM12-202ENST00000585388 HDGFP51858 240 aaKnown RBP25.08■■□□□ 1.61
LSM12-202ENST00000585388 BCANQ96GW7 911 aa25.08■■□□□ 1.61
LSM12-202ENST00000585388 PPP1R15AO75807 674 aaPredicted RBP25.07■■□□□ 1.6
LSM12-202ENST00000585388 ITGAEP38570 1179 aa25.05■■□□□ 1.6
LSM12-202ENST00000585388 SENP3Q9H4L4 574 aaPredicted RBP25.05■■□□□ 1.6
LSM12-202ENST00000585388 CHD2O14647 1828 aaKnown RBP25.05■■□□□ 1.6
LSM12-202ENST00000585388 NUP155O75694 1391 aa25.05■■□□□ 1.6
LSM12-202ENST00000585388 PROSER2Q86WR7 435 aaPredicted RBP25.04■■□□□ 1.6
LSM12-202ENST00000585388 FAM135BQ49AJ0 1406 aa25.03■■□□□ 1.6
LSM12-202ENST00000585388 DIP2AQ14689 1571 aa25.03■■□□□ 1.6
LSM12-202ENST00000585388 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.03■■□□□ 1.6
LSM12-202ENST00000585388 PHF23Q9BUL5 403 aaPredicted RBP25.03■■□□□ 1.6
LSM12-202ENST00000585388 CHGAP10645 457 aaKnown RBP25.01■■□□□ 1.59
LSM12-202ENST00000585388 ROBO1Q9Y6N7 1651 aa25.01■■□□□ 1.59
LSM12-202ENST00000585388 MSH6P52701 1360 aa25■■□□□ 1.59
LSM12-202ENST00000585388 SPHKAPQ2M3C7 1700 aa25■■□□□ 1.59
LSM12-202ENST00000585388 PPARGC1BQ86YN6 1023 aaKnown RBP24.98■■□□□ 1.59
LSM12-202ENST00000585388 TBX22Q9Y458 520 aa24.95■■□□□ 1.58
LSM12-202ENST00000585388 RRBP1Q9P2E9 1410 aaKnown RBP24.95■■□□□ 1.58
LSM12-202ENST00000585388 RBM33Q96EV2 1170 aaKnown RBP24.94■■□□□ 1.58
LSM12-202ENST00000585388 ADAMTS13Q76LX8 1427 aa24.94■■□□□ 1.58
LSM12-202ENST00000585388 PIK3R4Q99570 1358 aa24.93■■□□□ 1.58
LSM12-202ENST00000585388 TRPM2O94759 1503 aa24.92■■□□□ 1.58
LSM12-202ENST00000585388 NCOA3Q9Y6Q9 1424 aa24.92■■□□□ 1.58
LSM12-202ENST00000585388 NUTM2DQ5VT03 806 aaPredicted RBP24.88■■□□□ 1.57
LSM12-202ENST00000585388 PHLPP1O60346 1717 aa24.87■■□□□ 1.57
LSM12-202ENST00000585388 SETBP1Q9Y6X0 1596 aa24.86■■□□□ 1.57
LSM12-202ENST00000585388 SLAIN2Q9P270 581 aa24.85■■□□□ 1.57
LSM12-202ENST00000585388 NAIPQ13075 1403 aa24.85■■□□□ 1.57
LSM12-202ENST00000585388 NRXN3Q9Y4C0 1643 aa24.84■■□□□ 1.57
LSM12-202ENST00000585388 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.83■■□□□ 1.57
LSM12-202ENST00000585388 CLTCL1P53675 1640 aa24.83■■□□□ 1.57
LSM12-202ENST00000585388 C14orf37Q86TY3 774 aa24.83■■□□□ 1.57
LSM12-202ENST00000585388 XRN1Q8IZH2 1706 aaKnown RBP24.81■■□□□ 1.56
LSM12-202ENST00000585388 KIF1BO60333 1816 aa24.81■■□□□ 1.56
LSM12-202ENST00000585388 ZNF326Q5BKZ1 582 aaKnown RBP24.79■■□□□ 1.56
LSM12-202ENST00000585388 COL16A1Q07092 1604 aaPredicted RBP24.79■■□□□ 1.56
LSM12-202ENST00000585388 HFM1A2PYH4 1435 aa24.78■■□□□ 1.56
LSM12-202ENST00000585388 PTPRUQ92729 1446 aa24.78■■□□□ 1.56
LSM12-202ENST00000585388 NEXMIFQ5QGS0 1516 aa24.78■■□□□ 1.56
LSM12-202ENST00000585388 CADPS2Q86UW7 1296 aa24.78■■□□□ 1.56
LSM12-202ENST00000585388 C19orf44Q9H6X5 657 aa24.78■■□□□ 1.56
LSM12-202ENST00000585388 AMOTL2Q9Y2J4 779 aa24.77■■□□□ 1.56
LSM12-202ENST00000585388 ATF3P18847 181 aa24.76■■□□□ 1.55
LSM12-202ENST00000585388 JCADQ9P266 1359 aa24.76■■□□□ 1.55
LSM12-202ENST00000585388 DCCP43146 1447 aa24.76■■□□□ 1.55
LSM12-202ENST00000585388 AHDC1Q5TGY3 1603 aaPredicted RBP24.75■■□□□ 1.55
LSM12-202ENST00000585388 RGS17Q9UGC6 210 aaPredicted RBP24.74■■□□□ 1.55
LSM12-202ENST00000585388 TRIM52Q96A61 297 aa24.69■■□□□ 1.54
LSM12-202ENST00000585388 SHPRHQ149N8 1683 aa24.69■■□□□ 1.54
LSM12-202ENST00000585388 METP08581 1390 aa24.68■■□□□ 1.54
LSM12-202ENST00000585388 SPATA31A6Q5VVP1 1343 aa24.64■■□□□ 1.54
LSM12-202ENST00000585388 NALCNQ8IZF0 1738 aa24.64■■□□□ 1.54
LSM12-202ENST00000585388 ADGRL3Q9HAR2 1447 aa24.64■■□□□ 1.54
LSM12-202ENST00000585388 SLC4A1APQ9BWU0 796 aaKnown RBP24.64■■□□□ 1.54
LSM12-202ENST00000585388 ASXL1Q8IXJ9 1541 aa24.64■■□□□ 1.53
LSM12-202ENST00000585388 SETD1AO15047 1707 aaKnown RBP24.64■■□□□ 1.53
LSM12-202ENST00000585388 MST1RQ04912 1400 aa24.62■■□□□ 1.53
LSM12-202ENST00000585388 BRINP3Q76B58 766 aa24.62■■□□□ 1.53
LSM12-202ENST00000585388 PPLO60437 1756 aa24.62■■□□□ 1.53
LSM12-202ENST00000585388 NHSL1Q5SYE7 1610 aa24.61■■□□□ 1.53
LSM12-202ENST00000585388 VGFO15240 615 aaPredicted RBP24.61■■□□□ 1.53
LSM12-202ENST00000585388 POTEAQ6S8J7 498 aa24.61■■□□□ 1.53
LSM12-202ENST00000585388 LRP6O75581 1613 aa24.6■■□□□ 1.53
LSM12-202ENST00000585388 PTCH1Q13635 1447 aa24.6■■□□□ 1.53
LSM12-202ENST00000585388 RPGRIP1LQ68CZ1 1315 aa24.6■■□□□ 1.53
LSM12-202ENST00000585388 PRAG1Q86YV5 1406 aa24.57■■□□□ 1.52
LSM12-202ENST00000585388 MEX3CQ5U5Q3 659 aaKnown RBP24.55■■□□□ 1.52
LSM12-202ENST00000585388 SETD5Q9C0A6 1442 aa24.54■■□□□ 1.52
LSM12-202ENST00000585388 CCDC144AA2RUR9 1427 aa24.52■■□□□ 1.52
LSM12-202ENST00000585388 ROBO2Q9HCK4 1378 aa24.49■■□□□ 1.51
LSM12-202ENST00000585388 IFT172Q9UG01 1749 aa24.49■■□□□ 1.51
LSM12-202ENST00000585388 LAMC1P11047 1609 aa24.48■■□□□ 1.51
LSM12-202ENST00000585388 C1orf167Q5SNV9 1468 aa24.48■■□□□ 1.51
LSM12-202ENST00000585388 ZNF772Q68DY9 489 aaPredicted RBP24.48■■□□□ 1.51
LSM12-202ENST00000585388 FOXD1Q16676 465 aa24.46■■□□□ 1.51
LSM12-202ENST00000585388 LRRC59Q96AG4 307 aaKnown RBP24.46■■□□□ 1.51
LSM12-202ENST00000585388 SPATA31E1Q6ZUB1 1445 aa24.44■■□□□ 1.5
LSM12-202ENST00000585388 ACIN1Q9UKV3 1341 aaKnown RBP24.44■■□□□ 1.5
LSM12-202ENST00000585388 CDC42BPGQ6DT37 1551 aa24.43■■□□□ 1.5
LSM12-202ENST00000585388 NUTM2BA6NNL0 878 aaPredicted RBP24.43■■□□□ 1.5
LSM12-202ENST00000585388 NUTM2EB1AL46 878 aaPredicted RBP24.43■■□□□ 1.5
LSM12-202ENST00000585388 NUTM2AQ8IVF1 878 aaPredicted RBP24.43■■□□□ 1.5
LSM12-202ENST00000585388 ANKRD30BQ9BXX2 1392 aa24.42■■□□□ 1.5
LSM12-202ENST00000585388 MPHOSPH9Q99550 1183 aa24.42■■□□□ 1.5
LSM12-202ENST00000585388 PNPLA6Q8IY17 1366 aa24.42■■□□□ 1.5
LSM12-202ENST00000585388 KNDC1Q76NI1 1749 aa24.39■■□□□ 1.5
LSM12-202ENST00000585388 DDX17Q92841 729 aaKnown RBP24.39■■□□□ 1.49
LSM12-202ENST00000585388 ADGRF5Q8IZF2 1346 aa24.38■■□□□ 1.49
LSM12-202ENST00000585388 TECPR2O15040 1411 aa24.38■■□□□ 1.49
LSM12-202ENST00000585388 RGL3Q3MIN7 710 aa24.37■■□□□ 1.49
LSM12-202ENST00000585388 PIK3C2GO75747 1445 aa24.35■■□□□ 1.49
LSM12-202ENST00000585388 CDK12Q9NYV4 1490 aaPredicted RBP24.35■■□□□ 1.49
LSM12-202ENST00000585388 AFF2P51816 1311 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms