RNA–Protein interactions for RNA: ENST00000585026.1

CSNK1D-226, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-226ENST00000585026 ADGRB3O60242 1522 aa16.55■□□□□ 0.24
CSNK1D-226ENST00000585026 ADGRL2O95490 1459 aa16.55■□□□□ 0.24
CSNK1D-226ENST00000585026 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.55■□□□□ 0.24
CSNK1D-226ENST00000585026 TET3O43151 1660 aa16.55■□□□□ 0.24
CSNK1D-226ENST00000585026 SLAIN2Q9P270 581 aa16.54■□□□□ 0.24
CSNK1D-226ENST00000585026 PLEKHG1Q9ULL1 1385 aa16.53■□□□□ 0.24
CSNK1D-226ENST00000585026 RBM33Q96EV2 1170 aaKnown RBP16.53■□□□□ 0.24
CSNK1D-226ENST00000585026 TBX22Q9Y458 520 aa16.52■□□□□ 0.24
CSNK1D-226ENST00000585026 CHGAP10645 457 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-226ENST00000585026 XIRP1Q702N8 1843 aaKnown RBP16.51■□□□□ 0.23
CSNK1D-226ENST00000585026 RIMS2Q9UQ26 1411 aa16.51■□□□□ 0.23
CSNK1D-226ENST00000585026 C14orf37Q86TY3 774 aa16.5■□□□□ 0.23
CSNK1D-226ENST00000585026 NCOA3Q9Y6Q9 1424 aa16.5■□□□□ 0.23
CSNK1D-226ENST00000585026 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
CSNK1D-226ENST00000585026 JCADQ9P266 1359 aa16.49■□□□□ 0.23
CSNK1D-226ENST00000585026 ZFYVE9O95405 1425 aa16.48■□□□□ 0.23
CSNK1D-226ENST00000585026 POTEAQ6S8J7 498 aa16.48■□□□□ 0.23
CSNK1D-226ENST00000585026 ROBO1Q9Y6N7 1651 aa16.47■□□□□ 0.23
CSNK1D-226ENST00000585026 CADPS2Q86UW7 1296 aa16.47■□□□□ 0.23
CSNK1D-226ENST00000585026 ATF3P18847 181 aa16.45■□□□□ 0.22
CSNK1D-226ENST00000585026 C19orf44Q9H6X5 657 aa16.45■□□□□ 0.22
CSNK1D-226ENST00000585026 PIK3R4Q99570 1358 aa16.45■□□□□ 0.22
CSNK1D-226ENST00000585026 ROCK1Q13464 1354 aa16.43■□□□□ 0.22
CSNK1D-226ENST00000585026 SPATA31A6Q5VVP1 1343 aa16.43■□□□□ 0.22
CSNK1D-226ENST00000585026 MEX3CQ5U5Q3 659 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-226ENST00000585026 TMEM131LA2VDJ0 1609 aa16.41■□□□□ 0.22
CSNK1D-226ENST00000585026 NUTM2DQ5VT03 806 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-226ENST00000585026 ZNF772Q68DY9 489 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-226ENST00000585026 NUP155O75694 1391 aa16.39■□□□□ 0.21
CSNK1D-226ENST00000585026 PHLPP1O60346 1717 aa16.39■□□□□ 0.21
CSNK1D-226ENST00000585026 DIP2AQ14689 1571 aa16.38■□□□□ 0.21
CSNK1D-226ENST00000585026 CHD2O14647 1828 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-226ENST00000585026 ADAMTS13Q76LX8 1427 aa16.38■□□□□ 0.21
CSNK1D-226ENST00000585026 GCC2Q8IWJ2 1684 aa16.38■□□□□ 0.21
CSNK1D-226ENST00000585026 AMOTL2Q9Y2J4 779 aa16.38■□□□□ 0.21
CSNK1D-226ENST00000585026 UNC13BO14795 1591 aa16.38■□□□□ 0.21
CSNK1D-226ENST00000585026 TRPM2O94759 1503 aa16.35■□□□□ 0.21
CSNK1D-226ENST00000585026 ITGAEP38570 1179 aa16.34■□□□□ 0.21
CSNK1D-226ENST00000585026 ZNF326Q5BKZ1 582 aaKnown RBP16.34■□□□□ 0.21
CSNK1D-226ENST00000585026 E9PCH4 1651 aa16.32■□□□□ 0.2
CSNK1D-226ENST00000585026 DCCP43146 1447 aa16.32■□□□□ 0.2
CSNK1D-226ENST00000585026 COL16A1Q07092 1604 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-226ENST00000585026 BRINP3Q76B58 766 aa16.32■□□□□ 0.2
CSNK1D-226ENST00000585026 IQGAP3Q86VI3 1631 aa16.32■□□□□ 0.2
CSNK1D-226ENST00000585026 MYO5BQ9ULV0 1848 aa16.32■□□□□ 0.2
CSNK1D-226ENST00000585026 AHDC1Q5TGY3 1603 aaPredicted RBP16.31■□□□□ 0.2
CSNK1D-226ENST00000585026 RXRBP28702 533 aa16.3■□□□□ 0.2
CSNK1D-226ENST00000585026 NUTM2BA6NNL0 878 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-226ENST00000585026 NUTM2EB1AL46 878 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-226ENST00000585026 NUTM2AQ8IVF1 878 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-226ENST00000585026 LRRC59Q96AG4 307 aaKnown RBP16.29■□□□□ 0.2
CSNK1D-226ENST00000585026 PTPRUQ92729 1446 aa16.28■□□□□ 0.2
CSNK1D-226ENST00000585026 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-226ENST00000585026 TRIM52Q96A61 297 aa16.28■□□□□ 0.2
CSNK1D-226ENST00000585026 LRP6O75581 1613 aa16.27■□□□□ 0.2
CSNK1D-226ENST00000585026 UPF1Q92900 1129 aaKnown RBP eCLIP16.25■□□□□ 0.194e-6■□□□□ 10.4
CSNK1D-226ENST00000585026 SETD5Q9C0A6 1442 aa16.25■□□□□ 0.19
CSNK1D-226ENST00000585026 SETBP1Q9Y6X0 1596 aa16.25■□□□□ 0.19
CSNK1D-226ENST00000585026 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
CSNK1D-226ENST00000585026 ASXL1Q8IXJ9 1541 aa16.23■□□□□ 0.19
CSNK1D-226ENST00000585026 METP08581 1390 aa16.23■□□□□ 0.19
CSNK1D-226ENST00000585026 AFF2P51816 1311 aa16.22■□□□□ 0.19
CSNK1D-226ENST00000585026 MST1RQ04912 1400 aa16.22■□□□□ 0.19
CSNK1D-226ENST00000585026 VGFO15240 615 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-226ENST00000585026 CDK12Q9NYV4 1490 aaPredicted RBP16.22■□□□□ 0.19
CSNK1D-226ENST00000585026 ADGRL3Q9HAR2 1447 aa16.21■□□□□ 0.19
CSNK1D-226ENST00000585026 SETD1AO15047 1707 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-226ENST00000585026 RBM6P78332 1123 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-226ENST00000585026 C8orf37Q96NL8 207 aa16.19■□□□□ 0.18
CSNK1D-226ENST00000585026 XRN1Q8IZH2 1706 aaKnown RBP16.19■□□□□ 0.18
CSNK1D-226ENST00000585026 PPARGC1BQ86YN6 1023 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-226ENST00000585026 QTRT2Q9H974 415 aaKnown RBP16.18■□□□□ 0.18
CSNK1D-226ENST00000585026 SPHKAPQ2M3C7 1700 aa16.17■□□□□ 0.18
CSNK1D-226ENST00000585026 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
CSNK1D-226ENST00000585026 NGLY1Q96IV0 654 aa16.17■□□□□ 0.18
CSNK1D-226ENST00000585026 RPGRIP1LQ68CZ1 1315 aa16.17■□□□□ 0.18
CSNK1D-226ENST00000585026 PNPLA6Q8IY17 1366 aa16.16■□□□□ 0.18
CSNK1D-226ENST00000585026 DDX17Q92841 729 aaKnown RBP16.15■□□□□ 0.18
CSNK1D-226ENST00000585026 C1orf167Q5SNV9 1468 aa16.14■□□□□ 0.17
CSNK1D-226ENST00000585026 NEXMIFQ5QGS0 1516 aa16.14■□□□□ 0.17
CSNK1D-226ENST00000585026 PTCH1Q13635 1447 aa16.13■□□□□ 0.17
CSNK1D-226ENST00000585026 NHSL1Q5SYE7 1610 aa16.13■□□□□ 0.17
CSNK1D-226ENST00000585026 ADAMTS2O95450 1211 aa16.13■□□□□ 0.17
CSNK1D-226ENST00000585026 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
CSNK1D-226ENST00000585026 FOXD1Q16676 465 aa16.11■□□□□ 0.17
CSNK1D-226ENST00000585026 SOS2Q07890 1332 aaPredicted RBP16.11■□□□□ 0.17
CSNK1D-226ENST00000585026 CLTCL1P53675 1640 aa16.11■□□□□ 0.17
CSNK1D-226ENST00000585026 NAIPQ13075 1403 aa16.11■□□□□ 0.17
CSNK1D-226ENST00000585026 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
CSNK1D-226ENST00000585026 TRPC5Q9UL62 973 aaPredicted RBP16.1■□□□□ 0.17
CSNK1D-226ENST00000585026 ROBO2Q9HCK4 1378 aa16.1■□□□□ 0.17
CSNK1D-226ENST00000585026 HFM1A2PYH4 1435 aa16.1■□□□□ 0.17
CSNK1D-226ENST00000585026 RRBP1Q9P2E9 1410 aaKnown RBP16.1■□□□□ 0.17
CSNK1D-226ENST00000585026 USP21Q9UK80 565 aa16.09■□□□□ 0.17
CSNK1D-226ENST00000585026 NPHP3Q7Z494 1330 aa16.08■□□□□ 0.16
CSNK1D-226ENST00000585026 RGS12O14924 1447 aa16.08■□□□□ 0.16
CSNK1D-226ENST00000585026 PRAG1Q86YV5 1406 aa16.08■□□□□ 0.16
CSNK1D-226ENST00000585026 KIF1BO60333 1816 aa16.08■□□□□ 0.16
CSNK1D-226ENST00000585026 ESCO1Q5FWF5 840 aa16.07■□□□□ 0.16
CSNK1D-226ENST00000585026 NALCNQ8IZF0 1738 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms