RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 CARD11Q9BXL7 1154 aa19.73■□□□□ 0.75
UBBP4-202ENST00000584755 ZFYVE9O95405 1425 aa19.73■□□□□ 0.75
UBBP4-202ENST00000584755 C3P01024 1663 aa19.73■□□□□ 0.75
UBBP4-202ENST00000584755 MYO5BQ9ULV0 1848 aa19.72■□□□□ 0.75
UBBP4-202ENST00000584755 NBPF1Q3BBV0 1214 aa19.72■□□□□ 0.75
UBBP4-202ENST00000584755 ADGRF5Q8IZF2 1346 aa19.71■□□□□ 0.75
UBBP4-202ENST00000584755 KDM5AP29375 1690 aaKnown RBP19.71■□□□□ 0.75
UBBP4-202ENST00000584755 TNRQ92752 1358 aa19.71■□□□□ 0.75
UBBP4-202ENST00000584755 PIK3C2GO75747 1445 aa19.71■□□□□ 0.75
UBBP4-202ENST00000584755 ADAMTSL3P82987 1691 aa19.7■□□□□ 0.74
UBBP4-202ENST00000584755 A2ML1A8K2U0 1454 aa19.7■□□□□ 0.74
UBBP4-202ENST00000584755 POLR1AO95602 1720 aaPredicted RBP19.67■□□□□ 0.74
UBBP4-202ENST00000584755 SETBP1Q9Y6X0 1596 aa19.67■□□□□ 0.74
UBBP4-202ENST00000584755 IQGAP1P46940 1657 aa19.67■□□□□ 0.74
UBBP4-202ENST00000584755 NLRP1Q9C000 1473 aa19.67■□□□□ 0.74
UBBP4-202ENST00000584755 VGFO15240 615 aaPredicted RBP19.66■□□□□ 0.74
UBBP4-202ENST00000584755 C14orf93Q9H972 538 aaKnown RBP19.63■□□□□ 0.73
UBBP4-202ENST00000584755 WASHC2AQ641Q2 1341 aa19.63■□□□□ 0.73
UBBP4-202ENST00000584755 SCAF11Q99590 1463 aaKnown RBP19.63■□□□□ 0.73
UBBP4-202ENST00000584755 CFAP70Q5T0N1 1121 aa19.62■□□□□ 0.73
UBBP4-202ENST00000584755 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
UBBP4-202ENST00000584755 UBR1Q8IWV7 1749 aa19.62■□□□□ 0.73
UBBP4-202ENST00000584755 ADGRB1O14514 1584 aa19.61■□□□□ 0.73
UBBP4-202ENST00000584755 CCDC7Q96M83 1385 aa19.61■□□□□ 0.73
UBBP4-202ENST00000584755 C11orf95C9JLR9 678 aaPredicted RBP19.61■□□□□ 0.73
UBBP4-202ENST00000584755 CEBPAP49715 358 aaPredicted RBP19.61■□□□□ 0.73
UBBP4-202ENST00000584755 ST20-MTHFSA0A0A6YYL1 179 aa19.6■□□□□ 0.73
UBBP4-202ENST00000584755 STAG3Q9UJ98 1225 aa19.6■□□□□ 0.73
UBBP4-202ENST00000584755 RIMS2Q9UQ26 1411 aa19.6■□□□□ 0.73
UBBP4-202ENST00000584755 KIF7Q2M1P5 1343 aa19.57■□□□□ 0.72
UBBP4-202ENST00000584755 DDX10Q13206 875 aaKnown RBP19.57■□□□□ 0.72
UBBP4-202ENST00000584755 MYO3AQ8NEV4 1616 aa19.56■□□□□ 0.72
UBBP4-202ENST00000584755 TESK2Q96S53 571 aa19.55■□□□□ 0.72
UBBP4-202ENST00000584755 TMEM2Q9UHN6 1383 aa19.55■□□□□ 0.72
UBBP4-202ENST00000584755 NUTM2DQ5VT03 806 aaPredicted RBP19.54■□□□□ 0.72
UBBP4-202ENST00000584755 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.54■□□□□ 0.72
UBBP4-202ENST00000584755 EIF3AQ14152 1382 aaKnown RBP19.54■□□□□ 0.72
UBBP4-202ENST00000584755 ASXL1Q8IXJ9 1541 aa19.53■□□□□ 0.72
UBBP4-202ENST00000584755 SLIT1O75093 1534 aa19.52■□□□□ 0.72
UBBP4-202ENST00000584755 ALKQ9UM73 1620 aa19.52■□□□□ 0.72
UBBP4-202ENST00000584755 ARHGAP23Q9P227 1491 aa19.52■□□□□ 0.71
UBBP4-202ENST00000584755 HDGFP51858 240 aaKnown RBP19.51■□□□□ 0.71
UBBP4-202ENST00000584755 SETD1AO15047 1707 aaKnown RBP19.51■□□□□ 0.71
UBBP4-202ENST00000584755 NRXN3Q9Y4C0 1643 aa19.51■□□□□ 0.71
UBBP4-202ENST00000584755 ZNF142P52746 1687 aaPredicted RBP19.49■□□□□ 0.71
UBBP4-202ENST00000584755 CEP170BQ9Y4F5 1589 aaPredicted RBP19.49■□□□□ 0.71
UBBP4-202ENST00000584755 SBNO2Q9Y2G9 1366 aa19.49■□□□□ 0.71
UBBP4-202ENST00000584755 MIER1Q8N108 512 aa19.48■□□□□ 0.71
UBBP4-202ENST00000584755 PTPRMP28827 1452 aa19.48■□□□□ 0.71
UBBP4-202ENST00000584755 SETD1BQ9UPS6 1966 aaKnown RBP19.46■□□□□ 0.71
UBBP4-202ENST00000584755 DISP3Q9P2K9 1392 aa19.46■□□□□ 0.71
UBBP4-202ENST00000584755 TMEM132EQ6IEE7 984 aa19.46■□□□□ 0.71
UBBP4-202ENST00000584755 ARHGEF28Q8N1W1 1705 aaKnown RBP19.45■□□□□ 0.7
UBBP4-202ENST00000584755 SLC24A1O60721 1099 aa19.45■□□□□ 0.7
UBBP4-202ENST00000584755 THEMISQ8N1K5 641 aaPredicted RBP19.45■□□□□ 0.7
UBBP4-202ENST00000584755 TMF1P82094 1093 aa19.44■□□□□ 0.7
UBBP4-202ENST00000584755 PLEKHG1Q9ULL1 1385 aa19.44■□□□□ 0.7
UBBP4-202ENST00000584755 PLPPR3Q6T4P5 718 aa19.43■□□□□ 0.7
UBBP4-202ENST00000584755 YTHDC2Q9H6S0 1430 aaKnown RBP19.43■□□□□ 0.7
UBBP4-202ENST00000584755 CENPJQ9HC77 1338 aaPredicted RBP19.42■□□□□ 0.7
UBBP4-202ENST00000584755 LTKP29376 864 aa19.41■□□□□ 0.7
UBBP4-202ENST00000584755 TRAK1Q9UPV9 953 aa19.41■□□□□ 0.7
UBBP4-202ENST00000584755 ADAMTS13Q76LX8 1427 aa19.41■□□□□ 0.7
UBBP4-202ENST00000584755 MED14O60244 1454 aa19.4■□□□□ 0.7
UBBP4-202ENST00000584755 DLC1Q96QB1 1528 aa19.4■□□□□ 0.7
UBBP4-202ENST00000584755 QRICH2Q9H0J4 1663 aa19.4■□□□□ 0.7
UBBP4-202ENST00000584755 LRPPRCP42704 1394 aaKnown RBP19.39■□□□□ 0.69
UBBP4-202ENST00000584755 TXNDC2Q86VQ3 553 aa19.39■□□□□ 0.69
UBBP4-202ENST00000584755 EID1Q9Y6B2 187 aa19.39■□□□□ 0.69
UBBP4-202ENST00000584755 CDCA8Q53HL2 280 aa19.38■□□□□ 0.69
UBBP4-202ENST00000584755 ABCC11Q96J66 1382 aa19.37■□□□□ 0.69
UBBP4-202ENST00000584755 KNDC1Q76NI1 1749 aa19.37■□□□□ 0.69
UBBP4-202ENST00000584755 TECPR2O15040 1411 aa19.36■□□□□ 0.69
UBBP4-202ENST00000584755 METP08581 1390 aa19.36■□□□□ 0.69
UBBP4-202ENST00000584755 DIP2AQ14689 1571 aa19.35■□□□□ 0.69
UBBP4-202ENST00000584755 POLR3GLQ9BT43 218 aa19.35■□□□□ 0.69
UBBP4-202ENST00000584755 ANP32CO43423 234 aa19.34■□□□□ 0.69
UBBP4-202ENST00000584755 SENP3Q9H4L4 574 aaPredicted RBP19.33■□□□□ 0.68
UBBP4-202ENST00000584755 SIRT1Q96EB6 747 aa19.32■□□□□ 0.68
UBBP4-202ENST00000584755 STK26Q9P289 416 aa19.32■□□□□ 0.68
UBBP4-202ENST00000584755 MYOM1P52179 1685 aa19.32■□□□□ 0.68
UBBP4-202ENST00000584755 CPS1P31327 1500 aa19.32■□□□□ 0.68
UBBP4-202ENST00000584755 PUS7Q96PZ0 661 aaKnown RBP19.31■□□□□ 0.68
UBBP4-202ENST00000584755 TULP4Q9NRJ4 1543 aa19.31■□□□□ 0.68
UBBP4-202ENST00000584755 TBX22Q9Y458 520 aa19.3■□□□□ 0.68
UBBP4-202ENST00000584755 FAM135BQ49AJ0 1406 aa19.3■□□□□ 0.68
UBBP4-202ENST00000584755 PRAM1Q96QH2 718 aa19.28■□□□□ 0.68
UBBP4-202ENST00000584755 ANKLE2Q86XL3 938 aa19.28■□□□□ 0.68
UBBP4-202ENST00000584755 KDM4FA0A1W2PPD8 638 aa19.27■□□□□ 0.67
UBBP4-202ENST00000584755 CCER2I3L3R5 266 aa19.27■□□□□ 0.67
UBBP4-202ENST00000584755 BCANQ96GW7 911 aa19.27■□□□□ 0.67
UBBP4-202ENST00000584755 PER1O15534 1290 aaPredicted RBP19.26■□□□□ 0.67
UBBP4-202ENST00000584755 EVC2Q86UK5 1308 aa19.26■□□□□ 0.67
UBBP4-202ENST00000584755 PIK3R4Q99570 1358 aa19.25■□□□□ 0.67
UBBP4-202ENST00000584755 PTPRUQ92729 1446 aa19.25■□□□□ 0.67
UBBP4-202ENST00000584755 PRKRIP1Q9H875 184 aaPredicted RBP19.25■□□□□ 0.67
UBBP4-202ENST00000584755 POGKQ9P215 609 aa19.25■□□□□ 0.67
UBBP4-202ENST00000584755 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
UBBP4-202ENST00000584755 SLC26A8Q96RN1 970 aa19.23■□□□□ 0.67
UBBP4-202ENST00000584755 PANK3Q9H999 370 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms