RNA–Protein interactions for RNA: ENST00000584476.1

MSI2-219, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-219ENST00000584476 HS3ST6Q96QI5 342 aa8.68□□□□□ -1.02
MSI2-219ENST00000584476 ROCK1Q13464 1354 aa8.68□□□□□ -1.02
MSI2-219ENST00000584476 DHX57Q6P158 1386 aaKnown RBP8.68□□□□□ -1.02
MSI2-219ENST00000584476 ARAP3Q8WWN8 1544 aa8.68□□□□□ -1.02
MSI2-219ENST00000584476 ARHGEF5Q12774 1597 aa8.68□□□□□ -1.02
MSI2-219ENST00000584476 FAM205CA6NFA0 338 aa8.67□□□□□ -1.02
MSI2-219ENST00000584476 CROCC2H7BZ55 1655 aa8.67□□□□□ -1.02
MSI2-219ENST00000584476 FANCAO15360 1455 aa8.67□□□□□ -1.02
MSI2-219ENST00000584476 HOXB1P14653 301 aaPredicted RBP8.67□□□□□ -1.02
MSI2-219ENST00000584476 C9orf84Q5VXU9 1444 aa8.67□□□□□ -1.02
MSI2-219ENST00000584476 CD109Q6YHK3 1445 aa8.67□□□□□ -1.02
MSI2-219ENST00000584476 PLEKHH2Q8IVE3 1493 aa8.67□□□□□ -1.02
MSI2-219ENST00000584476 ZNF710Q8N1W2 664 aa8.67□□□□□ -1.02
MSI2-219ENST00000584476 KIAA1107Q9UPP5 1409 aa8.67□□□□□ -1.02
MSI2-219ENST00000584476 ABCC1P33527 1531 aa8.66□□□□□ -1.02
MSI2-219ENST00000584476 ADGRL2O95490 1459 aa8.66□□□□□ -1.02
MSI2-219ENST00000584476 CCDC141Q6ZP82 1450 aa8.66□□□□□ -1.02
MSI2-219ENST00000584476 SHANK2Q9UPX8 1470 aa8.66□□□□□ -1.02
MSI2-219ENST00000584476 NCOA1Q15788 1441 aa8.66□□□□□ -1.02
MSI2-219ENST00000584476 TRAPPC8Q9Y2L5 1435 aa8.66□□□□□ -1.02
MSI2-219ENST00000584476 MMRN1Q13201 1228 aa8.66□□□□□ -1.02
MSI2-219ENST00000584476 MS4A4AQ96JQ5 239 aa8.66□□□□□ -1.02
MSI2-219ENST00000584476 KDM6BO15054 1643 aa8.65□□□□□ -1.02
MSI2-219ENST00000584476 POTEB3A0JP26 581 aa8.65□□□□□ -1.02
MSI2-219ENST00000584476 RSPH4AQ5TD94 716 aa8.65□□□□□ -1.02
MSI2-219ENST00000584476 POTEBQ6S5H4 581 aa8.65□□□□□ -1.02
MSI2-219ENST00000584476 PHF8Q9UPP1 1060 aa8.65□□□□□ -1.02
MSI2-219ENST00000584476 GCC2Q8IWJ2 1684 aa8.65□□□□□ -1.03
MSI2-219ENST00000584476 GLI2P10070 1586 aa8.65□□□□□ -1.03
MSI2-219ENST00000584476 ANKRD30AQ9BXX3 1397 aa8.64□□□□□ -1.03
MSI2-219ENST00000584476 RIMBP2O15034 1052 aa8.64□□□□□ -1.03
MSI2-219ENST00000584476 TSPY4P0CV99 314 aa8.64□□□□□ -1.03
MSI2-219ENST00000584476 TSPY10P0CW01 314 aa8.64□□□□□ -1.03
MSI2-219ENST00000584476 FAM69CQ0P6D2 419 aa8.64□□□□□ -1.03
MSI2-219ENST00000584476 ADGBQ8N7X0 1667 aa8.64□□□□□ -1.03
MSI2-219ENST00000584476 DIP2BQ9P265 1576 aa8.64□□□□□ -1.03
MSI2-219ENST00000584476 ADGRL1O94910 1474 aa8.64□□□□□ -1.03
MSI2-219ENST00000584476 SCAPERQ9BY12 1400 aa8.63□□□□□ -1.03
MSI2-219ENST00000584476 MAP3K4Q9Y6R4 1608 aa8.63□□□□□ -1.03
MSI2-219ENST00000584476 DNAJC5Q9H3Z4 198 aa8.63□□□□□ -1.03
MSI2-219ENST00000584476 MAST1Q9Y2H9 1570 aa8.62□□□□□ -1.03
MSI2-219ENST00000584476 ZEB1P37275 1124 aaPredicted RBP8.62□□□□□ -1.03
MSI2-219ENST00000584476 NLRP6P59044 892 aa8.62□□□□□ -1.03
MSI2-219ENST00000584476 TMEM92Q6UXU6 159 aa8.62□□□□□ -1.03
MSI2-219ENST00000584476 AFAP1Q8N556 730 aa8.62□□□□□ -1.03
MSI2-219ENST00000584476 KRTAP3-3Q9BYR6 98 aa8.62□□□□□ -1.03
MSI2-219ENST00000584476 KRTAP3-2Q9BYR7 98 aa8.62□□□□□ -1.03
MSI2-219ENST00000584476 ZSWIM6Q9HCJ5 1215 aa8.62□□□□□ -1.03
MSI2-219ENST00000584476 KIF15Q9NS87 1388 aa8.61□□□□□ -1.03
MSI2-219ENST00000584476 BCL11BQ9C0K0 894 aaPredicted RBP8.61□□□□□ -1.03
MSI2-219ENST00000584476 SPAG9O60271 1321 aaKnown RBP8.6□□□□□ -1.03
MSI2-219ENST00000584476 NEO1Q92859 1461 aa8.6□□□□□ -1.03
MSI2-219ENST00000584476 TRIM52Q96A61 297 aa8.6□□□□□ -1.03
MSI2-219ENST00000584476 ANKRD50Q9ULJ7 1429 aa8.6□□□□□ -1.03
MSI2-219ENST00000584476 CFAP74Q9C0B2 1584 aa8.6□□□□□ -1.03
MSI2-219ENST00000584476 FBXO22Q8NEZ5 403 aa8.59□□□□□ -1.03
MSI2-219ENST00000584476 STK24Q9Y6E0 443 aa8.59□□□□□ -1.03
MSI2-219ENST00000584476 ERBB3P21860 1342 aa8.58□□□□□ -1.04
MSI2-219ENST00000584476 PLXNC1O60486 1568 aa8.58□□□□□ -1.04
MSI2-219ENST00000584476 RTEL1-TNFRSF6BF6WH68 1400 aa8.58□□□□□ -1.04
MSI2-219ENST00000584476 POGZQ7Z3K3 1410 aa8.58□□□□□ -1.04
MSI2-219ENST00000584476 ZFYVE16Q7Z3T8 1539 aa8.58□□□□□ -1.04
MSI2-219ENST00000584476 DENND4BO75064 1496 aaPredicted RBP8.57□□□□□ -1.04
MSI2-219ENST00000584476 CLSPNQ9HAW4 1339 aa8.57□□□□□ -1.04
MSI2-219ENST00000584476 PPRC1Q5VV67 1664 aaKnown RBP8.57□□□□□ -1.04
MSI2-219ENST00000584476 ECM2O94769 699 aaPredicted RBP8.57□□□□□ -1.04
MSI2-219ENST00000584476 ATP7AQ04656 1500 aa8.57□□□□□ -1.04
MSI2-219ENST00000584476 ZNF518AQ6AHZ1 1483 aa8.57□□□□□ -1.04
MSI2-219ENST00000584476 INO80Q9ULG1 1556 aaPredicted RBP8.56□□□□□ -1.04
MSI2-219ENST00000584476 RAPGEF3O95398 923 aa8.56□□□□□ -1.04
MSI2-219ENST00000584476 MPHOSPH9Q99550 1183 aa8.56□□□□□ -1.04
MSI2-219ENST00000584476 KIF13AQ9H1H9 1805 aa8.56□□□□□ -1.04
MSI2-219ENST00000584476 PZPP20742 1482 aa8.56□□□□□ -1.04
MSI2-219ENST00000584476 DUOX2Q9NRD8 1548 aa8.55□□□□□ -1.04
MSI2-219ENST00000584476 STK25O00506 426 aa8.55□□□□□ -1.04
MSI2-219ENST00000584476 GPR153Q6NV75 609 aa8.55□□□□□ -1.04
MSI2-219ENST00000584476 MFRPQ9BY79 579 aa8.55□□□□□ -1.04
MSI2-219ENST00000584476 MYT1LQ9UL68 1186 aa8.55□□□□□ -1.04
MSI2-219ENST00000584476 KDM5CP41229 1560 aa8.55□□□□□ -1.04
MSI2-219ENST00000584476 TSPOAP1O95153 1857 aa8.54□□□□□ -1.04
MSI2-219ENST00000584476 TEX14Q8IWB6 1497 aa8.54□□□□□ -1.04
MSI2-219ENST00000584476 NUP155O75694 1391 aa8.54□□□□□ -1.04
MSI2-219ENST00000584476 PKD2Q13563 968 aa8.54□□□□□ -1.04
MSI2-219ENST00000584476 SIN3AQ96ST3 1273 aa8.54□□□□□ -1.04
MSI2-219ENST00000584476 ERBINQ96RT1 1412 aa8.54□□□□□ -1.04
MSI2-219ENST00000584476 ACIN1Q9UKV3 1341 aaKnown RBP8.54□□□□□ -1.04
MSI2-219ENST00000584476 KIDINS220Q9ULH0 1771 aa8.53□□□□□ -1.04
MSI2-219ENST00000584476 MLH3Q9UHC1 1453 aa8.53□□□□□ -1.04
MSI2-219ENST00000584476 FRMPD1Q5SYB0 1578 aa8.52□□□□□ -1.04
MSI2-219ENST00000584476 HECW2Q9P2P5 1572 aa8.52□□□□□ -1.04
MSI2-219ENST00000584476 RICTORQ6R327 1708 aa8.52□□□□□ -1.05
MSI2-219ENST00000584476 NEUROD1Q13562 356 aa8.52□□□□□ -1.05
MSI2-219ENST00000584476 VARS2Q5ST30 1063 aaKnown RBP8.52□□□□□ -1.05
MSI2-219ENST00000584476 KDM5DQ9BY66 1539 aa8.52□□□□□ -1.05
MSI2-219ENST00000584476 UNC13BO14795 1591 aa8.52□□□□□ -1.05
MSI2-219ENST00000584476 COL17A1Q9UMD9 1497 aaPredicted RBP8.51□□□□□ -1.05
MSI2-219ENST00000584476 DHX29Q7Z478 1369 aaKnown RBP8.51□□□□□ -1.05
MSI2-219ENST00000584476 YEATS2Q9ULM3 1422 aa8.51□□□□□ -1.05
MSI2-219ENST00000584476 ABCA6Q8N139 1617 aa8.51□□□□□ -1.05
MSI2-219ENST00000584476 RGL2O15211 777 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms