RNA–Protein interactions for RNA: ENST00000584250.1

TTC39C-209, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 1 (best) BASIC

Gene TTC39C, Length 1,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-209ENST00000584250 FBXO41Q8TF61 875 aa37.1■■■■□ 3.53
TTC39C-209ENST00000584250 MPHOSPH9Q99550 1183 aa37.1■■■■□ 3.53
TTC39C-209ENST00000584250 NUTM2DQ5VT03 806 aaPredicted RBP37.09■■■■□ 3.53
TTC39C-209ENST00000584250 STRCP1A6NGW2 1772 aa37.07■■■■□ 3.53
TTC39C-209ENST00000584250 SLC26A8Q96RN1 970 aa37.02■■■■□ 3.52
TTC39C-209ENST00000584250 PPP1R15AO75807 674 aaPredicted RBP36.97■■■■□ 3.51
TTC39C-209ENST00000584250 PLEKHG1Q9ULL1 1385 aa36.96■■■■□ 3.51
TTC39C-209ENST00000584250 CPS1P31327 1500 aa36.95■■■■□ 3.51
TTC39C-209ENST00000584250 KIF1BO60333 1816 aa36.95■■■■□ 3.51
TTC39C-209ENST00000584250 BCANQ96GW7 911 aa36.94■■■■□ 3.5
TTC39C-209ENST00000584250 ZNF326Q5BKZ1 582 aaKnown RBP36.93■■■■□ 3.5
TTC39C-209ENST00000584250 HDGFP51858 240 aaKnown RBP36.92■■■■□ 3.5
TTC39C-209ENST00000584250 ABCF1Q8NE71 845 aaKnown RBP eCLIP36.92■■■■□ 3.5
TTC39C-209ENST00000584250 IQSEC2Q5JU85 1478 aa36.92■■■■□ 3.5
TTC39C-209ENST00000584250 ACIN1Q9UKV3 1341 aaKnown RBP36.87■■■■□ 3.49
TTC39C-209ENST00000584250 NEXMIFQ5QGS0 1516 aa36.87■■■■□ 3.49
TTC39C-209ENST00000584250 ADAMTS13Q76LX8 1427 aa36.86■■■■□ 3.49
TTC39C-209ENST00000584250 LRRC7Q96NW7 1537 aa36.86■■■■□ 3.49
TTC39C-209ENST00000584250 CCDC144AA2RUR9 1427 aa36.83■■■■□ 3.49
TTC39C-209ENST00000584250 HRCP23327 699 aa36.82■■■■□ 3.48
TTC39C-209ENST00000584250 NRXN3Q9Y4C0 1643 aa36.8■■■■□ 3.48
TTC39C-209ENST00000584250 KCNA6P17658 529 aa36.79■■■■□ 3.48
TTC39C-209ENST00000584250 TBX22Q9Y458 520 aa36.78■■■■□ 3.48
TTC39C-209ENST00000584250 UBAP1LF5GYI3 381 aa36.76■■■■□ 3.48
TTC39C-209ENST00000584250 SPATA31E1Q6ZUB1 1445 aa36.76■■■■□ 3.47
TTC39C-209ENST00000584250 XIRP1Q702N8 1843 aaKnown RBP36.75■■■■□ 3.47
TTC39C-209ENST00000584250 NWD1Q149M9 1564 aa36.75■■■■□ 3.47
TTC39C-209ENST00000584250 CHD2O14647 1828 aaKnown RBP36.74■■■■□ 3.47
TTC39C-209ENST00000584250 RBM33Q96EV2 1170 aaKnown RBP36.74■■■■□ 3.47
TTC39C-209ENST00000584250 RGL3Q3MIN7 710 aa36.73■■■■□ 3.47
TTC39C-209ENST00000584250 SETBP1Q9Y6X0 1596 aa36.73■■■■□ 3.47
TTC39C-209ENST00000584250 PPLO60437 1756 aa36.71■■■■□ 3.47
TTC39C-209ENST00000584250 DIP2AQ14689 1571 aa36.7■■■■□ 3.47
TTC39C-209ENST00000584250 ANKRD30BQ9BXX2 1392 aa36.69■■■■□ 3.46
TTC39C-209ENST00000584250 ALKQ9UM73 1620 aa36.69■■■■□ 3.46
TTC39C-209ENST00000584250 PTPRUQ92729 1446 aa36.68■■■■□ 3.46
TTC39C-209ENST00000584250 RPGRIP1LQ68CZ1 1315 aa36.67■■■■□ 3.46
TTC39C-209ENST00000584250 TMEM94Q12767 1356 aa36.66■■■■□ 3.46
TTC39C-209ENST00000584250 PROSER2Q86WR7 435 aaPredicted RBP36.66■■■■□ 3.46
TTC39C-209ENST00000584250 NKTRP30414 1462 aaKnown RBP36.64■■■■□ 3.46
TTC39C-209ENST00000584250 METP08581 1390 aa36.64■■■■□ 3.46
TTC39C-209ENST00000584250 VGFO15240 615 aaPredicted RBP36.63■■■■□ 3.45
TTC39C-209ENST00000584250 IFT172Q9UG01 1749 aa36.61■■■■□ 3.45
TTC39C-209ENST00000584250 ADGRF5Q8IZF2 1346 aa36.6■■■■□ 3.45
TTC39C-209ENST00000584250 PIK3R4Q99570 1358 aa36.6■■■■□ 3.45
TTC39C-209ENST00000584250 PIP4K2BP78356 416 aa36.58■■■■□ 3.45
TTC39C-209ENST00000584250 AMOTL2Q9Y2J4 779 aa36.58■■■■□ 3.45
TTC39C-209ENST00000584250 SETD1AO15047 1707 aaKnown RBP36.56■■■■□ 3.44
TTC39C-209ENST00000584250 TOM1O60784 492 aa36.56■■■■□ 3.44
TTC39C-209ENST00000584250 SCAF1Q9H7N4 1312 aaKnown RBP36.54■■■■□ 3.44
TTC39C-209ENST00000584250 XRN1Q8IZH2 1706 aaKnown RBP36.54■■■■□ 3.44
TTC39C-209ENST00000584250 TRIM26Q12899 539 aaPredicted RBP36.53■■■■□ 3.44
TTC39C-209ENST00000584250 PIK3C2GO75747 1445 aa36.42■■■■□ 3.42
TTC39C-209ENST00000584250 MSH6P52701 1360 aa36.39■■■■□ 3.42
TTC39C-209ENST00000584250 MYOM2P54296 1465 aa36.37■■■■□ 3.41
TTC39C-209ENST00000584250 NRXN1Q9ULB1 1477 aa36.37■■■■□ 3.41
TTC39C-209ENST00000584250 HSPA1LP34931 641 aa36.37■■■■□ 3.41
TTC39C-209ENST00000584250 ASXL1Q8IXJ9 1541 aa36.37■■■■□ 3.41
TTC39C-209ENST00000584250 C14orf37Q86TY3 774 aa36.36■■■■□ 3.41
TTC39C-209ENST00000584250 NCOA3Q9Y6Q9 1424 aa36.35■■■■□ 3.41
TTC39C-209ENST00000584250 DHX57Q6P158 1386 aaKnown RBP36.35■■■■□ 3.41
TTC39C-209ENST00000584250 TMEM132EQ6IEE7 984 aa36.34■■■■□ 3.41
TTC39C-209ENST00000584250 ROBO2Q9HCK4 1378 aa36.34■■■■□ 3.41
TTC39C-209ENST00000584250 SIPA1L2Q9P2F8 1722 aaPredicted RBP36.34■■■■□ 3.41
TTC39C-209ENST00000584250 KDM2AQ9Y2K7 1162 aa36.33■■■■□ 3.41
TTC39C-209ENST00000584250 DCAF11Q8TEB1 546 aa36.31■■■■□ 3.4
TTC39C-209ENST00000584250 CFAP70Q5T0N1 1121 aa36.3■■■■□ 3.4
TTC39C-209ENST00000584250 C19orf44Q9H6X5 657 aa36.29■■■■□ 3.4
TTC39C-209ENST00000584250 C14orf93Q9H972 538 aaKnown RBP36.28■■■■□ 3.4
TTC39C-209ENST00000584250 PTCH1Q13635 1447 aa36.27■■■■□ 3.4
TTC39C-209ENST00000584250 STK26Q9P289 416 aa36.27■■■■□ 3.4
TTC39C-209ENST00000584250 PRAG1Q86YV5 1406 aa36.25■■■■□ 3.39
TTC39C-209ENST00000584250 SIN3AQ96ST3 1273 aa36.25■■■■□ 3.39
TTC39C-209ENST00000584250 SLAIN2Q9P270 581 aa36.25■■■■□ 3.39
TTC39C-209ENST00000584250 NALCNQ8IZF0 1738 aa36.25■■■■□ 3.39
TTC39C-209ENST00000584250 FAM135BQ49AJ0 1406 aa36.24■■■■□ 3.39
TTC39C-209ENST00000584250 ROBO1Q9Y6N7 1651 aa36.23■■■■□ 3.39
TTC39C-209ENST00000584250 LRPPRCP42704 1394 aaKnown RBP36.22■■■■□ 3.39
TTC39C-209ENST00000584250 ADGRL3Q9HAR2 1447 aa36.21■■■■□ 3.39
TTC39C-209ENST00000584250 ATF3P18847 181 aa36.19■■■■□ 3.38
TTC39C-209ENST00000584250 YTHDC2Q9H6S0 1430 aaKnown RBP36.18■■■■□ 3.38
TTC39C-209ENST00000584250 CADPS2Q86UW7 1296 aa36.18■■■■□ 3.38
TTC39C-209ENST00000584250 LAMC1P11047 1609 aa36.18■■■■□ 3.38
TTC39C-209ENST00000584250 TECPR2O15040 1411 aa36.17■■■■□ 3.38
TTC39C-209ENST00000584250 ABCC11Q96J66 1382 aa36.16■■■■□ 3.38
TTC39C-209ENST00000584250 WAPLQ7Z5K2 1190 aa36.16■■■■□ 3.38
TTC39C-209ENST00000584250 PLEKHH1Q9ULM0 1364 aa36.15■■■■□ 3.38
TTC39C-209ENST00000584250 DCCP43146 1447 aa36.15■■■■□ 3.38
TTC39C-209ENST00000584250 KNDC1Q76NI1 1749 aa36.14■■■■□ 3.38
TTC39C-209ENST00000584250 ADGRB1O14514 1584 aa36.12■■■■□ 3.37
TTC39C-209ENST00000584250 NEUROD1Q13562 356 aa36.12■■■■□ 3.37
TTC39C-209ENST00000584250 MST1RQ04912 1400 aa36.11■■■■□ 3.37
TTC39C-209ENST00000584250 STAC3Q96MF2 364 aa36.08■■■■□ 3.37
TTC39C-209ENST00000584250 L3MBTL2Q969R5 705 aa36.06■■■■□ 3.36
TTC39C-209ENST00000584250 BRINP3Q76B58 766 aa36.04■■■■□ 3.36
TTC39C-209ENST00000584250 PCGF6Q9BYE7 350 aa36.03■■■■□ 3.36
TTC39C-209ENST00000584250 TRAK1Q9UPV9 953 aa35.99■■■■□ 3.35
TTC39C-209ENST00000584250 PHLPP1O60346 1717 aa35.99■■■■□ 3.35
TTC39C-209ENST00000584250 SAFB2Q14151 953 aaKnown RBP eCLIP35.98■■■■□ 3.35
TTC39C-209ENST00000584250 SIRT1Q96EB6 747 aa35.98■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms