RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 MYO5BQ9ULV0 1848 aa20.57■□□□□ 0.88
CDK5RAP3-233ENST00000584186 TMEM131LA2VDJ0 1609 aa20.56■□□□□ 0.88
CDK5RAP3-233ENST00000584186 RIMS2Q9UQ26 1411 aa20.56■□□□□ 0.88
CDK5RAP3-233ENST00000584186 NUTM2DQ5VT03 806 aaPredicted RBP20.55■□□□□ 0.88
CDK5RAP3-233ENST00000584186 TRIM52Q96A61 297 aa20.54■□□□□ 0.88
CDK5RAP3-233ENST00000584186 ZFYVE9O95405 1425 aa20.53■□□□□ 0.88
CDK5RAP3-233ENST00000584186 DISP3Q9P2K9 1392 aa20.52■□□□□ 0.88
CDK5RAP3-233ENST00000584186 PLEKHG1Q9ULL1 1385 aa20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 KCNA6P17658 529 aa20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 HSPA1LP34931 641 aa20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 HFM1A2PYH4 1435 aa20.51■□□□□ 0.87
CDK5RAP3-233ENST00000584186 PROSER2Q86WR7 435 aaPredicted RBP20.49■□□□□ 0.87
CDK5RAP3-233ENST00000584186 RBM33Q96EV2 1170 aaKnown RBP20.49■□□□□ 0.87
CDK5RAP3-233ENST00000584186 SPHKAPQ2M3C7 1700 aa20.48■□□□□ 0.87
CDK5RAP3-233ENST00000584186 ALKQ9UM73 1620 aa20.47■□□□□ 0.87
CDK5RAP3-233ENST00000584186 ZNF326Q5BKZ1 582 aaKnown RBP20.47■□□□□ 0.87
CDK5RAP3-233ENST00000584186 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
CDK5RAP3-233ENST00000584186 SLC4A1APQ9BWU0 796 aaKnown RBP20.44■□□□□ 0.86
CDK5RAP3-233ENST00000584186 XIRP1Q702N8 1843 aaKnown RBP20.43■□□□□ 0.86
CDK5RAP3-233ENST00000584186 TBX22Q9Y458 520 aa20.43■□□□□ 0.86
CDK5RAP3-233ENST00000584186 NKTRP30414 1462 aaKnown RBP20.41■□□□□ 0.86
CDK5RAP3-233ENST00000584186 NWD1Q149M9 1564 aa20.41■□□□□ 0.86
CDK5RAP3-233ENST00000584186 TRPM2O94759 1503 aa20.4■□□□□ 0.86
CDK5RAP3-233ENST00000584186 CLTCL1P53675 1640 aa20.39■□□□□ 0.86
CDK5RAP3-233ENST00000584186 ADAMTS13Q76LX8 1427 aa20.39■□□□□ 0.85
CDK5RAP3-233ENST00000584186 CHD2O14647 1828 aaKnown RBP20.37■□□□□ 0.85
CDK5RAP3-233ENST00000584186 FOXD1Q16676 465 aa20.36■□□□□ 0.85
CDK5RAP3-233ENST00000584186 C14orf37Q86TY3 774 aa20.36■□□□□ 0.85
CDK5RAP3-233ENST00000584186 MSH6P52701 1360 aa20.35■□□□□ 0.85
CDK5RAP3-233ENST00000584186 DIP2AQ14689 1571 aa20.35■□□□□ 0.85
CDK5RAP3-233ENST00000584186 ILDR2Q71H61 639 aa20.34■□□□□ 0.85
CDK5RAP3-233ENST00000584186 AMOTL2Q9Y2J4 779 aa20.33■□□□□ 0.85
CDK5RAP3-233ENST00000584186 PIK3R4Q99570 1358 aa20.33■□□□□ 0.84
CDK5RAP3-233ENST00000584186 KIF1BO60333 1816 aa20.32■□□□□ 0.84
CDK5RAP3-233ENST00000584186 NEXMIFQ5QGS0 1516 aa20.31■□□□□ 0.84
CDK5RAP3-233ENST00000584186 MPHOSPH9Q99550 1183 aa20.3■□□□□ 0.84
CDK5RAP3-233ENST00000584186 FAM135BQ49AJ0 1406 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 PTPRUQ92729 1446 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 NRXN3Q9Y4C0 1643 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 SLAIN2Q9P270 581 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 SETBP1Q9Y6X0 1596 aa20.29■□□□□ 0.84
CDK5RAP3-233ENST00000584186 MED1Q15648 1581 aaPredicted RBP20.27■□□□□ 0.84
CDK5RAP3-233ENST00000584186 METP08581 1390 aa20.27■□□□□ 0.84
CDK5RAP3-233ENST00000584186 SETD5Q9C0A6 1442 aa20.27■□□□□ 0.83
CDK5RAP3-233ENST00000584186 VGFO15240 615 aaPredicted RBP20.26■□□□□ 0.83
CDK5RAP3-233ENST00000584186 ROBO1Q9Y6N7 1651 aa20.26■□□□□ 0.83
CDK5RAP3-233ENST00000584186 ATF3P18847 181 aa20.25■□□□□ 0.83
CDK5RAP3-233ENST00000584186 CCDC144AA2RUR9 1427 aa20.25■□□□□ 0.83
CDK5RAP3-233ENST00000584186 NCOA3Q9Y6Q9 1424 aa20.25■□□□□ 0.83
CDK5RAP3-233ENST00000584186 C19orf44Q9H6X5 657 aa20.24■□□□□ 0.83
CDK5RAP3-233ENST00000584186 RPGRIP1LQ68CZ1 1315 aa20.24■□□□□ 0.83
CDK5RAP3-233ENST00000584186 RGL3Q3MIN7 710 aa20.23■□□□□ 0.83
CDK5RAP3-233ENST00000584186 PHF23Q9BUL5 403 aaPredicted RBP20.23■□□□□ 0.83
CDK5RAP3-233ENST00000584186 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
CDK5RAP3-233ENST00000584186 RAB3GAP2Q9H2M9 1393 aa20.21■□□□□ 0.83
CDK5RAP3-233ENST00000584186 XRN1Q8IZH2 1706 aaKnown RBP20.2■□□□□ 0.82
CDK5RAP3-233ENST00000584186 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.2■□□□□ 0.82
CDK5RAP3-233ENST00000584186 ACIN1Q9UKV3 1341 aaKnown RBP20.2■□□□□ 0.82
CDK5RAP3-233ENST00000584186 PPLO60437 1756 aa20.16■□□□□ 0.82
CDK5RAP3-233ENST00000584186 PHLPP1O60346 1717 aa20.14■□□□□ 0.81
CDK5RAP3-233ENST00000584186 SPATA31E1Q6ZUB1 1445 aa20.14■□□□□ 0.81
CDK5RAP3-233ENST00000584186 ADGRF5Q8IZF2 1346 aa20.14■□□□□ 0.81
CDK5RAP3-233ENST00000584186 SOCS7O14512 581 aa20.14■□□□□ 0.81
CDK5RAP3-233ENST00000584186 DCCP43146 1447 aa20.11■□□□□ 0.81
CDK5RAP3-233ENST00000584186 ADGRL3Q9HAR2 1447 aa20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 SETD1AO15047 1707 aaKnown RBP20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 ANKRD30BQ9BXX2 1392 aa20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 ROBO2Q9HCK4 1378 aa20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 BRINP3Q76B58 766 aa20.1■□□□□ 0.81
CDK5RAP3-233ENST00000584186 JCADQ9P266 1359 aa20.08■□□□□ 0.81
CDK5RAP3-233ENST00000584186 STK26Q9P289 416 aa20.08■□□□□ 0.81
CDK5RAP3-233ENST00000584186 PTCH1Q13635 1447 aa20.08■□□□□ 0.8
CDK5RAP3-233ENST00000584186 MST1RQ04912 1400 aa20.07■□□□□ 0.8
CDK5RAP3-233ENST00000584186 NALCNQ8IZF0 1738 aa20.07■□□□□ 0.8
CDK5RAP3-233ENST00000584186 COL16A1Q07092 1604 aaPredicted RBP20.06■□□□□ 0.8
CDK5RAP3-233ENST00000584186 IFT172Q9UG01 1749 aa20.05■□□□□ 0.8
CDK5RAP3-233ENST00000584186 ASXL1Q8IXJ9 1541 aa20.04■□□□□ 0.8
CDK5RAP3-233ENST00000584186 TMEM132EQ6IEE7 984 aa20.04■□□□□ 0.8
CDK5RAP3-233ENST00000584186 AHDC1Q5TGY3 1603 aaPredicted RBP20.04■□□□□ 0.8
CDK5RAP3-233ENST00000584186 RGS17Q9UGC6 210 aaPredicted RBP20.03■□□□□ 0.8
CDK5RAP3-233ENST00000584186 PIK3C2GO75747 1445 aa20.02■□□□□ 0.8
CDK5RAP3-233ENST00000584186 HRCP23327 699 aa20.01■□□□□ 0.79
CDK5RAP3-233ENST00000584186 DDX17Q92841 729 aaKnown RBP20.01■□□□□ 0.79
CDK5RAP3-233ENST00000584186 PRAG1Q86YV5 1406 aa20.01■□□□□ 0.79
CDK5RAP3-233ENST00000584186 WAPLQ7Z5K2 1190 aa20■□□□□ 0.79
CDK5RAP3-233ENST00000584186 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
CDK5RAP3-233ENST00000584186 LRPPRCP42704 1394 aaKnown RBP19.99■□□□□ 0.79
CDK5RAP3-233ENST00000584186 CFAP70Q5T0N1 1121 aa19.98■□□□□ 0.79
CDK5RAP3-233ENST00000584186 MEX3CQ5U5Q3 659 aaKnown RBP19.98■□□□□ 0.79
CDK5RAP3-233ENST00000584186 SPATA31A6Q5VVP1 1343 aa19.98■□□□□ 0.79
CDK5RAP3-233ENST00000584186 NUTM2BA6NNL0 878 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 NUTM2EB1AL46 878 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 NUTM2AQ8IVF1 878 aaPredicted RBP19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 ORAI2Q96SN7 254 aa19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 C14orf93Q9H972 538 aaKnown RBP19.97■□□□□ 0.79
CDK5RAP3-233ENST00000584186 KDM2AQ9Y2K7 1162 aa19.96■□□□□ 0.79
CDK5RAP3-233ENST00000584186 MYOM2P54296 1465 aa19.96■□□□□ 0.79
CDK5RAP3-233ENST00000584186 ABCC11Q96J66 1382 aa19.95■□□□□ 0.79
CDK5RAP3-233ENST00000584186 TECPR2O15040 1411 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms