RNA–Protein interactions for RNA: ENST00000583902.1

CASC3-209, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-209ENST00000583902 TNRQ92752 1358 aa13.17□□□□□ -0.3
CASC3-209ENST00000583902 MADDQ8WXG6 1647 aa13.17□□□□□ -0.3
CASC3-209ENST00000583902 SLC4A2P04920 1241 aa13.15□□□□□ -0.3
CASC3-209ENST00000583902 MYOM2P54296 1465 aa13.15□□□□□ -0.3
CASC3-209ENST00000583902 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.31
CASC3-209ENST00000583902 ZFYVE9O95405 1425 aa13.14□□□□□ -0.31
CASC3-209ENST00000583902 TMEM131LA2VDJ0 1609 aa13.14□□□□□ -0.31
CASC3-209ENST00000583902 IDI1Q13907 227 aa13.14□□□□□ -0.31
CASC3-209ENST00000583902 VGFO15240 615 aaPredicted RBP13.13□□□□□ -0.31
CASC3-209ENST00000583902 IFT172Q9UG01 1749 aa13.13□□□□□ -0.31
CASC3-209ENST00000583902 DCAF11Q8TEB1 546 aa13.12□□□□□ -0.31
CASC3-209ENST00000583902 KIAA1210Q9ULL0 1709 aa13.11□□□□□ -0.31
CASC3-209ENST00000583902 FBXO31Q5XUX0 539 aaPredicted RBP13.11□□□□□ -0.31
CASC3-209ENST00000583902 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.11□□□□□ -0.31
CASC3-209ENST00000583902 STAG3Q9UJ98 1225 aa13.11□□□□□ -0.31
CASC3-209ENST00000583902 PPLO60437 1756 aa13.11□□□□□ -0.31
CASC3-209ENST00000583902 PRAG1Q86YV5 1406 aa13.1□□□□□ -0.31
CASC3-209ENST00000583902 UGGT1Q9NYU2 1555 aa13.1□□□□□ -0.31
CASC3-209ENST00000583902 NRXN1Q9ULB1 1477 aa13.1□□□□□ -0.31
CASC3-209ENST00000583902 RGL3Q3MIN7 710 aa13.09□□□□□ -0.31
CASC3-209ENST00000583902 ZNF326Q5BKZ1 582 aaKnown RBP13.09□□□□□ -0.31
CASC3-209ENST00000583902 A2ML1A8K2U0 1454 aa13.09□□□□□ -0.31
CASC3-209ENST00000583902 PTPRMP28827 1452 aa13.09□□□□□ -0.31
CASC3-209ENST00000583902 ZNF142P52746 1687 aaPredicted RBP13.08□□□□□ -0.31
CASC3-209ENST00000583902 THEMISQ8N1K5 641 aaPredicted RBP13.08□□□□□ -0.32
CASC3-209ENST00000583902 UBR1Q8IWV7 1749 aa13.08□□□□□ -0.32
CASC3-209ENST00000583902 LAMC1P11047 1609 aa13.07□□□□□ -0.32
CASC3-209ENST00000583902 MYO3AQ8NEV4 1616 aa13.07□□□□□ -0.32
CASC3-209ENST00000583902 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
CASC3-209ENST00000583902 RALGAPBQ86X10 1494 aa13.07□□□□□ -0.32
CASC3-209ENST00000583902 NEXMIFQ5QGS0 1516 aa13.07□□□□□ -0.32
CASC3-209ENST00000583902 MYO5BQ9ULV0 1848 aa13.06□□□□□ -0.32
CASC3-209ENST00000583902 SLC24A1O60721 1099 aa13.06□□□□□ -0.32
CASC3-209ENST00000583902 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
CASC3-209ENST00000583902 SLIT1O75093 1534 aa13.05□□□□□ -0.32
CASC3-209ENST00000583902 TRPM1Q7Z4N2 1603 aa13.05□□□□□ -0.32
CASC3-209ENST00000583902 TMEM2Q9UHN6 1383 aa13.05□□□□□ -0.32
CASC3-209ENST00000583902 CEP170BQ9Y4F5 1589 aaPredicted RBP13.04□□□□□ -0.32
CASC3-209ENST00000583902 KDM2AQ9Y2K7 1162 aa13.04□□□□□ -0.32
CASC3-209ENST00000583902 SETBP1Q9Y6X0 1596 aa13.03□□□□□ -0.32
CASC3-209ENST00000583902 CEBPAP49715 358 aaPredicted RBP13.03□□□□□ -0.32
CASC3-209ENST00000583902 EID1Q9Y6B2 187 aa13.03□□□□□ -0.32
CASC3-209ENST00000583902 PIK3C2GO75747 1445 aa13.03□□□□□ -0.32
CASC3-209ENST00000583902 RIMS2Q9UQ26 1411 aa13.03□□□□□ -0.32
CASC3-209ENST00000583902 ARHGAP23Q9P227 1491 aa13.03□□□□□ -0.32
CASC3-209ENST00000583902 EIF4G2P78344 907 aaKnown RBP eCLIP13.01□□□□□ -0.33
CASC3-209ENST00000583902 NBPF8Q3BBV2 869 aa13.01□□□□□ -0.33
CASC3-209ENST00000583902 C14orf93Q9H972 538 aaKnown RBP13.01□□□□□ -0.33
CASC3-209ENST00000583902 ROCK2O75116 1388 aaKnown RBP13.01□□□□□ -0.33
CASC3-209ENST00000583902 EIF3AQ14152 1382 aaKnown RBP12.99□□□□□ -0.33
CASC3-209ENST00000583902 SAMD1Q6SPF0 538 aaPredicted RBP12.99□□□□□ -0.33
CASC3-209ENST00000583902 ADGRF5Q8IZF2 1346 aa12.98□□□□□ -0.33
CASC3-209ENST00000583902 CARD11Q9BXL7 1154 aa12.98□□□□□ -0.33
CASC3-209ENST00000583902 DIP2AQ14689 1571 aa12.98□□□□□ -0.33
CASC3-209ENST00000583902 PLEKHG1Q9ULL1 1385 aa12.97□□□□□ -0.33
CASC3-209ENST00000583902 ZNF316A6NFI3 1004 aaPredicted RBP12.96□□□□□ -0.33
CASC3-209ENST00000583902 ANKLE2Q86XL3 938 aa12.96□□□□□ -0.33
CASC3-209ENST00000583902 SCAF11Q99590 1463 aaKnown RBP12.96□□□□□ -0.34
CASC3-209ENST00000583902 KDM4FA0A1W2PPD8 638 aa12.95□□□□□ -0.34
CASC3-209ENST00000583902 CAPN15O75808 1086 aa12.95□□□□□ -0.34
CASC3-209ENST00000583902 TXNDC2Q86VQ3 553 aa12.95□□□□□ -0.34
CASC3-209ENST00000583902 PIK3R4Q99570 1358 aa12.94□□□□□ -0.34
CASC3-209ENST00000583902 USP47Q96K76 1375 aa12.94□□□□□ -0.34
CASC3-209ENST00000583902 IQGAP1P46940 1657 aa12.93□□□□□ -0.34
CASC3-209ENST00000583902 ALKQ9UM73 1620 aa12.93□□□□□ -0.34
CASC3-209ENST00000583902 MYCNP04198 464 aaPredicted RBP12.93□□□□□ -0.34
CASC3-209ENST00000583902 SIRT1Q96EB6 747 aa12.93□□□□□ -0.34
CASC3-209ENST00000583902 MED14O60244 1454 aa12.92□□□□□ -0.34
CASC3-209ENST00000583902 ADGRB1O14514 1584 aa12.92□□□□□ -0.34
CASC3-209ENST00000583902 TBX22Q9Y458 520 aa12.92□□□□□ -0.34
CASC3-209ENST00000583902 POLR1AO95602 1720 aaPredicted RBP12.91□□□□□ -0.34
CASC3-209ENST00000583902 CFAP70Q5T0N1 1121 aa12.91□□□□□ -0.34
CASC3-209ENST00000583902 SBNO2Q9Y2G9 1366 aa12.91□□□□□ -0.34
CASC3-209ENST00000583902 DLC1Q96QB1 1528 aa12.9□□□□□ -0.34
CASC3-209ENST00000583902 NBPF1Q3BBV0 1214 aa12.9□□□□□ -0.34
CASC3-209ENST00000583902 CDCA8Q53HL2 280 aa12.9□□□□□ -0.34
CASC3-209ENST00000583902 NRXN3Q9Y4C0 1643 aa12.9□□□□□ -0.34
CASC3-209ENST00000583902 SETD1AO15047 1707 aaKnown RBP12.9□□□□□ -0.34
CASC3-209ENST00000583902 LTKP29376 864 aa12.89□□□□□ -0.35
CASC3-209ENST00000583902 SPINK5Q9NQ38 1064 aaPredicted RBP12.89□□□□□ -0.35
CASC3-209ENST00000583902 ABCC11Q96J66 1382 aa12.89□□□□□ -0.35
CASC3-209ENST00000583902 KNDC1Q76NI1 1749 aa12.88□□□□□ -0.35
CASC3-209ENST00000583902 HSPA5P11021 654 aaKnown RBP12.88□□□□□ -0.35
CASC3-209ENST00000583902 FOXD4L1Q9NU39 408 aa12.88□□□□□ -0.35
CASC3-209ENST00000583902 ZNF219Q9P2Y4 722 aaPredicted RBP12.88□□□□□ -0.35
CASC3-209ENST00000583902 LRPPRCP42704 1394 aaKnown RBP12.88□□□□□ -0.35
CASC3-209ENST00000583902 TECPR2O15040 1411 aa12.88□□□□□ -0.35
CASC3-209ENST00000583902 YTHDC2Q9H6S0 1430 aaKnown RBP12.88□□□□□ -0.35
CASC3-209ENST00000583902 PUS7Q96PZ0 661 aaKnown RBP12.87□□□□□ -0.35
CASC3-209ENST00000583902 ADAMTS13Q76LX8 1427 aa12.87□□□□□ -0.35
CASC3-209ENST00000583902 BCANQ96GW7 911 aa12.86□□□□□ -0.35
CASC3-209ENST00000583902 FAM135BQ49AJ0 1406 aa12.86□□□□□ -0.35
CASC3-209ENST00000583902 NUTM2DQ5VT03 806 aaPredicted RBP12.85□□□□□ -0.35
CASC3-209ENST00000583902 NPHP4O75161 1426 aaPredicted RBP12.85□□□□□ -0.35
CASC3-209ENST00000583902 CENPJQ9HC77 1338 aaPredicted RBP12.85□□□□□ -0.35
CASC3-209ENST00000583902 LMTK3Q96Q04 1460 aa12.85□□□□□ -0.35
CASC3-209ENST00000583902 ST20-MTHFSA0A0A6YYL1 179 aa12.84□□□□□ -0.35
CASC3-209ENST00000583902 TMF1P82094 1093 aa12.84□□□□□ -0.35
CASC3-209ENST00000583902 ARHGEF28Q8N1W1 1705 aaKnown RBP12.84□□□□□ -0.35
CASC3-209ENST00000583902 CPS1P31327 1500 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms