RNA–Protein interactions for RNA: ENST00000583842.1

CCDC84-210, Transcript of coiled-coil domain containing 84, humanhuman

TSL 3

Gene CCDC84, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC84-210ENST00000583842 RIMS2Q9UQ26 1411 aa16.66■□□□□ 0.26
CCDC84-210ENST00000583842 PIK3R4Q99570 1358 aa16.65■□□□□ 0.26
CCDC84-210ENST00000583842 SLC26A8Q96RN1 970 aa16.65■□□□□ 0.26
CCDC84-210ENST00000583842 SLC4A1APQ9BWU0 796 aaKnown RBP16.65■□□□□ 0.26
CCDC84-210ENST00000583842 TMEM131LA2VDJ0 1609 aa16.65■□□□□ 0.26
CCDC84-210ENST00000583842 LRRC7Q96NW7 1537 aa16.65■□□□□ 0.26
CCDC84-210ENST00000583842 PPP1R15AO75807 674 aaPredicted RBP16.64■□□□□ 0.25
CCDC84-210ENST00000583842 CHGAP10645 457 aaKnown RBP16.64■□□□□ 0.25
CCDC84-210ENST00000583842 RPGRIP1LQ68CZ1 1315 aa16.64■□□□□ 0.25
CCDC84-210ENST00000583842 NCOA3Q9Y6Q9 1424 aa16.63■□□□□ 0.25
CCDC84-210ENST00000583842 BCANQ96GW7 911 aa16.62■□□□□ 0.25
CCDC84-210ENST00000583842 VGFO15240 615 aaPredicted RBP16.6■□□□□ 0.25
CCDC84-210ENST00000583842 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
CCDC84-210ENST00000583842 MPHOSPH9Q99550 1183 aa16.6■□□□□ 0.25
CCDC84-210ENST00000583842 ADAMTS13Q76LX8 1427 aa16.56■□□□□ 0.24
CCDC84-210ENST00000583842 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
CCDC84-210ENST00000583842 ZNF326Q5BKZ1 582 aaKnown RBP16.56■□□□□ 0.24
CCDC84-210ENST00000583842 NKTRP30414 1462 aaKnown RBP16.55■□□□□ 0.24
CCDC84-210ENST00000583842 TMEM94Q12767 1356 aa16.55■□□□□ 0.24
CCDC84-210ENST00000583842 TRPM2O94759 1503 aa16.55■□□□□ 0.24
CCDC84-210ENST00000583842 FAM135BQ49AJ0 1406 aa16.54■□□□□ 0.24
CCDC84-210ENST00000583842 STRCP1A6NGW2 1772 aa16.54■□□□□ 0.24
CCDC84-210ENST00000583842 PIP4K2BP78356 416 aa16.53■□□□□ 0.24
CCDC84-210ENST00000583842 C19orf44Q9H6X5 657 aa16.53■□□□□ 0.24
CCDC84-210ENST00000583842 HSPA1LP34931 641 aa16.52■□□□□ 0.24
CCDC84-210ENST00000583842 AMOTL2Q9Y2J4 779 aa16.52■□□□□ 0.24
CCDC84-210ENST00000583842 SPHKAPQ2M3C7 1700 aa16.52■□□□□ 0.24
CCDC84-210ENST00000583842 DIP2AQ14689 1571 aa16.51■□□□□ 0.23
CCDC84-210ENST00000583842 NUTM2DQ5VT03 806 aaPredicted RBP16.51■□□□□ 0.23
CCDC84-210ENST00000583842 SLAIN2Q9P270 581 aa16.5■□□□□ 0.23
CCDC84-210ENST00000583842 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
CCDC84-210ENST00000583842 MSH6P52701 1360 aa16.49■□□□□ 0.23
CCDC84-210ENST00000583842 CHD2O14647 1828 aaKnown RBP16.48■□□□□ 0.23
CCDC84-210ENST00000583842 CADPS2Q86UW7 1296 aa16.48■□□□□ 0.23
CCDC84-210ENST00000583842 STAC3Q96MF2 364 aa16.48■□□□□ 0.23
CCDC84-210ENST00000583842 ALKQ9UM73 1620 aa16.48■□□□□ 0.23
CCDC84-210ENST00000583842 SCAF1Q9H7N4 1312 aaKnown RBP16.47■□□□□ 0.23
CCDC84-210ENST00000583842 SETBP1Q9Y6X0 1596 aa16.47■□□□□ 0.23
CCDC84-210ENST00000583842 MYO5BQ9ULV0 1848 aa16.47■□□□□ 0.23
CCDC84-210ENST00000583842 CCDC144AA2RUR9 1427 aa16.46■□□□□ 0.23
CCDC84-210ENST00000583842 ANKRD30BQ9BXX2 1392 aa16.46■□□□□ 0.23
CCDC84-210ENST00000583842 CLTCL1P53675 1640 aa16.45■□□□□ 0.22
CCDC84-210ENST00000583842 RAB3GAP2Q9H2M9 1393 aa16.44■□□□□ 0.22
CCDC84-210ENST00000583842 METP08581 1390 aa16.43■□□□□ 0.22
CCDC84-210ENST00000583842 ATF3P18847 181 aa16.43■□□□□ 0.22
CCDC84-210ENST00000583842 FOXD1Q16676 465 aa16.43■□□□□ 0.22
CCDC84-210ENST00000583842 NEXMIFQ5QGS0 1516 aa16.43■□□□□ 0.22
CCDC84-210ENST00000583842 SPATA31E1Q6ZUB1 1445 aa16.43■□□□□ 0.22
CCDC84-210ENST00000583842 KIF1BO60333 1816 aa16.42■□□□□ 0.22
CCDC84-210ENST00000583842 PTPRUQ92729 1446 aa16.42■□□□□ 0.22
CCDC84-210ENST00000583842 XIRP1Q702N8 1843 aaKnown RBP16.41■□□□□ 0.22
CCDC84-210ENST00000583842 SIRT1Q96EB6 747 aa16.41■□□□□ 0.22
CCDC84-210ENST00000583842 RBM33Q96EV2 1170 aaKnown RBP16.41■□□□□ 0.22
CCDC84-210ENST00000583842 DCCP43146 1447 aa16.4■□□□□ 0.22
CCDC84-210ENST00000583842 PRAG1Q86YV5 1406 aa16.4■□□□□ 0.22
CCDC84-210ENST00000583842 DISP3Q9P2K9 1392 aa16.39■□□□□ 0.21
CCDC84-210ENST00000583842 C14orf37Q86TY3 774 aa16.39■□□□□ 0.21
CCDC84-210ENST00000583842 RGL3Q3MIN7 710 aa16.38■□□□□ 0.21
CCDC84-210ENST00000583842 SENP3Q9H4L4 574 aaPredicted RBP16.37■□□□□ 0.21
CCDC84-210ENST00000583842 C14orf93Q9H972 538 aaKnown RBP16.37■□□□□ 0.21
CCDC84-210ENST00000583842 NRXN3Q9Y4C0 1643 aa16.37■□□□□ 0.21
CCDC84-210ENST00000583842 ADGRF5Q8IZF2 1346 aa16.36■□□□□ 0.21
CCDC84-210ENST00000583842 ABCC11Q96J66 1382 aa16.34■□□□□ 0.21
CCDC84-210ENST00000583842 PTCH1Q13635 1447 aa16.33■□□□□ 0.2
CCDC84-210ENST00000583842 XRN1Q8IZH2 1706 aaKnown RBP16.31■□□□□ 0.2
CCDC84-210ENST00000583842 PIK3C2GO75747 1445 aa16.29■□□□□ 0.2
CCDC84-210ENST00000583842 ADGRL3Q9HAR2 1447 aa16.29■□□□□ 0.2
CCDC84-210ENST00000583842 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
CCDC84-210ENST00000583842 PPLO60437 1756 aa16.29■□□□□ 0.2
CCDC84-210ENST00000583842 BRINP3Q76B58 766 aa16.29■□□□□ 0.2
CCDC84-210ENST00000583842 NRXN1Q9ULB1 1477 aa16.29■□□□□ 0.2
CCDC84-210ENST00000583842 TECPR2O15040 1411 aa16.28■□□□□ 0.2
CCDC84-210ENST00000583842 ROBO2Q9HCK4 1378 aa16.28■□□□□ 0.2
CCDC84-210ENST00000583842 JCADQ9P266 1359 aa16.28■□□□□ 0.2
CCDC84-210ENST00000583842 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.28■□□□□ 0.2
CCDC84-210ENST00000583842 ILDR2Q71H61 639 aa16.27■□□□□ 0.2
CCDC84-210ENST00000583842 LRRC59Q96AG4 307 aaKnown RBP16.27■□□□□ 0.2
CCDC84-210ENST00000583842 DHX57Q6P158 1386 aaKnown RBP16.26■□□□□ 0.19
CCDC84-210ENST00000583842 SPATA31A6Q5VVP1 1343 aa16.26■□□□□ 0.19
CCDC84-210ENST00000583842 MYOM2P54296 1465 aa16.26■□□□□ 0.19
CCDC84-210ENST00000583842 ROBO1Q9Y6N7 1651 aa16.26■□□□□ 0.19
CCDC84-210ENST00000583842 MST1RQ04912 1400 aa16.26■□□□□ 0.19
CCDC84-210ENST00000583842 SOCS7O14512 581 aa16.25■□□□□ 0.19
CCDC84-210ENST00000583842 SETD1AO15047 1707 aaKnown RBP16.23■□□□□ 0.19
CCDC84-210ENST00000583842 CFAP70Q5T0N1 1121 aa16.23■□□□□ 0.19
CCDC84-210ENST00000583842 TMEM132EQ6IEE7 984 aa16.23■□□□□ 0.19
CCDC84-210ENST00000583842 DCAF11Q8TEB1 546 aa16.23■□□□□ 0.19
CCDC84-210ENST00000583842 PHF23Q9BUL5 403 aaPredicted RBP16.22■□□□□ 0.19
CCDC84-210ENST00000583842 YTHDC2Q9H6S0 1430 aaKnown RBP16.21■□□□□ 0.19
CCDC84-210ENST00000583842 AHDC1Q5TGY3 1603 aaPredicted RBP16.21■□□□□ 0.19
CCDC84-210ENST00000583842 C1orf167Q5SNV9 1468 aa16.21■□□□□ 0.19
CCDC84-210ENST00000583842 MED1Q15648 1581 aaPredicted RBP16.21■□□□□ 0.18
CCDC84-210ENST00000583842 WAPLQ7Z5K2 1190 aa16.2■□□□□ 0.18
CCDC84-210ENST00000583842 STK26Q9P289 416 aa16.2■□□□□ 0.18
CCDC84-210ENST00000583842 SOS2Q07890 1332 aaPredicted RBP16.19■□□□□ 0.18
CCDC84-210ENST00000583842 IFT172Q9UG01 1749 aa16.19■□□□□ 0.18
CCDC84-210ENST00000583842 RGS17Q9UGC6 210 aaPredicted RBP16.19■□□□□ 0.18
CCDC84-210ENST00000583842 ORAI2Q96SN7 254 aa16.16■□□□□ 0.18
CCDC84-210ENST00000583842 KDM2AQ9Y2K7 1162 aa16.16■□□□□ 0.18
CCDC84-210ENST00000583842 ASXL1Q8IXJ9 1541 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 188.6 ms