RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-222ENST00000583732 RBM33Q96EV2 1170 aaKnown RBP23.34■■□□□ 1.33
SREBF1-222ENST00000583732 NWD1Q149M9 1564 aa23.34■■□□□ 1.33
SREBF1-222ENST00000583732 TMEM131LA2VDJ0 1609 aa23.33■■□□□ 1.33
SREBF1-222ENST00000583732 KCNA6P17658 529 aa23.33■■□□□ 1.33
SREBF1-222ENST00000583732 IQGAP3Q86VI3 1631 aa23.31■■□□□ 1.32
SREBF1-222ENST00000583732 ITGAEP38570 1179 aa23.31■■□□□ 1.32
SREBF1-222ENST00000583732 PROSER2Q86WR7 435 aaPredicted RBP23.31■■□□□ 1.32
SREBF1-222ENST00000583732 RIMS2Q9UQ26 1411 aa23.31■■□□□ 1.32
SREBF1-222ENST00000583732 PPARGC1BQ86YN6 1023 aaKnown RBP23.3■■□□□ 1.32
SREBF1-222ENST00000583732 ZFYVE9O95405 1425 aa23.3■■□□□ 1.32
SREBF1-222ENST00000583732 NKTRP30414 1462 aaKnown RBP23.3■■□□□ 1.32
SREBF1-222ENST00000583732 ROBO1Q9Y6N7 1651 aa23.29■■□□□ 1.32
SREBF1-222ENST00000583732 PPP1R15AO75807 674 aaPredicted RBP23.29■■□□□ 1.32
SREBF1-222ENST00000583732 CHGAP10645 457 aaKnown RBP23.29■■□□□ 1.32
SREBF1-222ENST00000583732 ROCK1Q13464 1354 aa23.27■■□□□ 1.32
SREBF1-222ENST00000583732 PLEKHG1Q9ULL1 1385 aa23.27■■□□□ 1.31
SREBF1-222ENST00000583732 CHD2O14647 1828 aaKnown RBP23.26■■□□□ 1.31
SREBF1-222ENST00000583732 FAM135BQ49AJ0 1406 aa23.25■■□□□ 1.31
SREBF1-222ENST00000583732 NUTM2DQ5VT03 806 aaPredicted RBP23.23■■□□□ 1.31
SREBF1-222ENST00000583732 NUP155O75694 1391 aa23.21■■□□□ 1.31
SREBF1-222ENST00000583732 MSH6P52701 1360 aa23.21■■□□□ 1.31
SREBF1-222ENST00000583732 HDGFP51858 240 aaKnown RBP23.2■■□□□ 1.3
SREBF1-222ENST00000583732 PHLPP1O60346 1717 aa23.17■■□□□ 1.3
SREBF1-222ENST00000583732 SPHKAPQ2M3C7 1700 aa23.17■■□□□ 1.3
SREBF1-222ENST00000583732 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.17■■□□□ 1.3
SREBF1-222ENST00000583732 ADAMTS13Q76LX8 1427 aa23.16■■□□□ 1.3
SREBF1-222ENST00000583732 DIP2AQ14689 1571 aa23.15■■□□□ 1.3
SREBF1-222ENST00000583732 TBX22Q9Y458 520 aa23.14■■□□□ 1.29
SREBF1-222ENST00000583732 C14orf37Q86TY3 774 aa23.12■■□□□ 1.29
SREBF1-222ENST00000583732 RGS17Q9UGC6 210 aaPredicted RBP23.12■■□□□ 1.29
SREBF1-222ENST00000583732 SLAIN2Q9P270 581 aa23.11■■□□□ 1.29
SREBF1-222ENST00000583732 TRPM2O94759 1503 aa23.11■■□□□ 1.29
SREBF1-222ENST00000583732 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.1■■□□□ 1.29
SREBF1-222ENST00000583732 NRXN3Q9Y4C0 1643 aa23.08■■□□□ 1.28
SREBF1-222ENST00000583732 COL16A1Q07092 1604 aaPredicted RBP23.06■■□□□ 1.28
SREBF1-222ENST00000583732 CLTCL1P53675 1640 aa23.05■■□□□ 1.28
SREBF1-222ENST00000583732 PIK3R4Q99570 1358 aa23.05■■□□□ 1.28
SREBF1-222ENST00000583732 PTPRUQ92729 1446 aa23.05■■□□□ 1.28
SREBF1-222ENST00000583732 ZNF326Q5BKZ1 582 aaKnown RBP23.04■■□□□ 1.28
SREBF1-222ENST00000583732 NCOA3Q9Y6Q9 1424 aa23.04■■□□□ 1.28
SREBF1-222ENST00000583732 AMOTL2Q9Y2J4 779 aa23.02■■□□□ 1.28
SREBF1-222ENST00000583732 XRN1Q8IZH2 1706 aaKnown RBP23.02■■□□□ 1.28
SREBF1-222ENST00000583732 JCADQ9P266 1359 aa23.01■■□□□ 1.27
SREBF1-222ENST00000583732 SETBP1Q9Y6X0 1596 aa23.01■■□□□ 1.27
SREBF1-222ENST00000583732 RRBP1Q9P2E9 1410 aaKnown RBP23.01■■□□□ 1.27
SREBF1-222ENST00000583732 POTEAQ6S8J7 498 aa23.01■■□□□ 1.27
SREBF1-222ENST00000583732 ATF3P18847 181 aa23■■□□□ 1.27
SREBF1-222ENST00000583732 KIF1BO60333 1816 aa23■■□□□ 1.27
SREBF1-222ENST00000583732 CADPS2Q86UW7 1296 aa22.99■■□□□ 1.27
SREBF1-222ENST00000583732 NAIPQ13075 1403 aa22.99■■□□□ 1.27
SREBF1-222ENST00000583732 C19orf44Q9H6X5 657 aa22.98■■□□□ 1.27
SREBF1-222ENST00000583732 NEXMIFQ5QGS0 1516 aa22.98■■□□□ 1.27
SREBF1-222ENST00000583732 AHDC1Q5TGY3 1603 aaPredicted RBP22.97■■□□□ 1.27
SREBF1-222ENST00000583732 SETD1AO15047 1707 aaKnown RBP22.96■■□□□ 1.27
SREBF1-222ENST00000583732 LRP6O75581 1613 aa22.94■■□□□ 1.26
SREBF1-222ENST00000583732 METP08581 1390 aa22.94■■□□□ 1.26
SREBF1-222ENST00000583732 SHPRHQ149N8 1683 aa22.93■■□□□ 1.26
SREBF1-222ENST00000583732 NALCNQ8IZF0 1738 aa22.91■■□□□ 1.26
SREBF1-222ENST00000583732 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
SREBF1-222ENST00000583732 MEX3CQ5U5Q3 659 aaKnown RBP22.9■■□□□ 1.26
SREBF1-222ENST00000583732 BRINP3Q76B58 766 aa22.9■■□□□ 1.26
SREBF1-222ENST00000583732 DCCP43146 1447 aa22.9■■□□□ 1.26
SREBF1-222ENST00000583732 ASXL1Q8IXJ9 1541 aa22.89■■□□□ 1.26
SREBF1-222ENST00000583732 MST1RQ04912 1400 aa22.88■■□□□ 1.25
SREBF1-222ENST00000583732 SPATA31A6Q5VVP1 1343 aa22.87■■□□□ 1.25
SREBF1-222ENST00000583732 NHSL1Q5SYE7 1610 aa22.87■■□□□ 1.25
SREBF1-222ENST00000583732 HFM1A2PYH4 1435 aa22.87■■□□□ 1.25
SREBF1-222ENST00000583732 ADGRL3Q9HAR2 1447 aa22.85■■□□□ 1.25
SREBF1-222ENST00000583732 PPLO60437 1756 aa22.83■■□□□ 1.24
SREBF1-222ENST00000583732 NUTM2BA6NNL0 878 aaPredicted RBP22.82■■□□□ 1.24
SREBF1-222ENST00000583732 NUTM2EB1AL46 878 aaPredicted RBP22.82■■□□□ 1.24
SREBF1-222ENST00000583732 NUTM2AQ8IVF1 878 aaPredicted RBP22.82■■□□□ 1.24
SREBF1-222ENST00000583732 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
SREBF1-222ENST00000583732 DDX17Q92841 729 aaKnown RBP22.79■■□□□ 1.24
SREBF1-222ENST00000583732 SETD5Q9C0A6 1442 aa22.77■■□□□ 1.24
SREBF1-222ENST00000583732 FOXD1Q16676 465 aa22.77■■□□□ 1.24
SREBF1-222ENST00000583732 PTCH1Q13635 1447 aa22.76■■□□□ 1.23
SREBF1-222ENST00000583732 VGFO15240 615 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-222ENST00000583732 ZNF772Q68DY9 489 aaPredicted RBP22.76■■□□□ 1.23
SREBF1-222ENST00000583732 ROBO2Q9HCK4 1378 aa22.75■■□□□ 1.23
SREBF1-222ENST00000583732 C1orf167Q5SNV9 1468 aa22.74■■□□□ 1.23
SREBF1-222ENST00000583732 RPGRIP1LQ68CZ1 1315 aa22.72■■□□□ 1.23
SREBF1-222ENST00000583732 LRRC59Q96AG4 307 aaKnown RBP22.71■■□□□ 1.23
SREBF1-222ENST00000583732 PNPLA6Q8IY17 1366 aa22.71■■□□□ 1.23
SREBF1-222ENST00000583732 AFF2P51816 1311 aa22.7■■□□□ 1.22
SREBF1-222ENST00000583732 IFT172Q9UG01 1749 aa22.68■■□□□ 1.22
SREBF1-222ENST00000583732 CCDC144AA2RUR9 1427 aa22.68■■□□□ 1.22
SREBF1-222ENST00000583732 C8orf37Q96NL8 207 aa22.67■■□□□ 1.22
SREBF1-222ENST00000583732 ORAI2Q96SN7 254 aa22.67■■□□□ 1.22
SREBF1-222ENST00000583732 LAMC1P11047 1609 aa22.67■■□□□ 1.22
SREBF1-222ENST00000583732 PRAG1Q86YV5 1406 aa22.66■■□□□ 1.22
SREBF1-222ENST00000583732 RXRBP28702 533 aa22.66■■□□□ 1.22
SREBF1-222ENST00000583732 RGL3Q3MIN7 710 aa22.65■■□□□ 1.22
SREBF1-222ENST00000583732 ADGRF5Q8IZF2 1346 aa22.64■■□□□ 1.22
SREBF1-222ENST00000583732 CDC42BPGQ6DT37 1551 aa22.63■■□□□ 1.21
SREBF1-222ENST00000583732 ADAMTS2O95450 1211 aa22.62■■□□□ 1.21
SREBF1-222ENST00000583732 SPATA31E1Q6ZUB1 1445 aa22.61■■□□□ 1.21
SREBF1-222ENST00000583732 MPHOSPH9Q99550 1183 aa22.61■■□□□ 1.21
SREBF1-222ENST00000583732 STK26Q9P289 416 aa22.61■■□□□ 1.21
SREBF1-222ENST00000583732 KNDC1Q76NI1 1749 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms