RNA–Protein interactions for RNA: ENST00000583475.1

VAPA-206, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-206ENST00000583475 CCDC102AQ96A19 550 aa8.79□□□□□ -1
VAPA-206ENST00000583475 NLRP7Q8WX94 980 aa8.78□□□□□ -1
VAPA-206ENST00000583475 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
VAPA-206ENST00000583475 TSR3Q9UJK0 312 aaKnown RBP8.76□□□□□ -1.01
VAPA-206ENST00000583475 HPS5Q9UPZ3 1129 aa8.76□□□□□ -1.01
VAPA-206ENST00000583475 PPP4CP60510 307 aa8.74□□□□□ -1.01
VAPA-206ENST00000583475 DAXXQ9UER7 740 aaPredicted RBP8.74□□□□□ -1.01
VAPA-206ENST00000583475 SLF2Q8IX21 1173 aa8.73□□□□□ -1.01
VAPA-206ENST00000583475 AK7Q96M32 723 aa8.73□□□□□ -1.01
VAPA-206ENST00000583475 SLC24A3Q9HC58 644 aa8.73□□□□□ -1.01
VAPA-206ENST00000583475 RNF40O75150 1001 aa8.71□□□□□ -1.02
VAPA-206ENST00000583475 SLC10A3P09131 477 aa8.71□□□□□ -1.02
VAPA-206ENST00000583475 MDM2Q00987 491 aaPredicted RBP8.71□□□□□ -1.02
VAPA-206ENST00000583475 TRIM66O15016 1216 aa8.7□□□□□ -1.02
VAPA-206ENST00000583475 NYAP1Q6ZVC0 841 aa8.7□□□□□ -1.02
VAPA-206ENST00000583475 TMUB1Q9BVT8 246 aa8.7□□□□□ -1.02
VAPA-206ENST00000583475 SLC4A3P48751 1232 aa8.69□□□□□ -1.02
VAPA-206ENST00000583475 REPIN1Q9BWE0 567 aaKnown RBP8.69□□□□□ -1.02
VAPA-206ENST00000583475 APLP1P51693 650 aa8.68□□□□□ -1.02
VAPA-206ENST00000583475 AMHR2Q16671 573 aa8.68□□□□□ -1.02
VAPA-206ENST00000583475 DDX11L8A8MPP1 907 aa8.67□□□□□ -1.02
VAPA-206ENST00000583475 NECTIN2Q92692 538 aa8.67□□□□□ -1.02
VAPA-206ENST00000583475 CLCN1P35523 988 aa8.66□□□□□ -1.02
VAPA-206ENST00000583475 TPRNQ4KMQ1 711 aa8.66□□□□□ -1.02
VAPA-206ENST00000583475 GPCPD1Q9NPB8 672 aa8.66□□□□□ -1.02
VAPA-206ENST00000583475 RSPH4AQ5TD94 716 aa8.65□□□□□ -1.02
VAPA-206ENST00000583475 SULF1Q8IWU6 871 aa8.64□□□□□ -1.03
VAPA-206ENST00000583475 FAM217BQ9NTX9 383 aaPredicted RBP8.64□□□□□ -1.03
VAPA-206ENST00000583475 CFHP08603 1231 aa8.63□□□□□ -1.03
VAPA-206ENST00000583475 CD46P15529 392 aa8.63□□□□□ -1.03
VAPA-206ENST00000583475 PDE4DQ08499 809 aa8.63□□□□□ -1.03
VAPA-206ENST00000583475 RDH13Q8NBN7 331 aa8.63□□□□□ -1.03
VAPA-206ENST00000583475 SSTR3P32745 418 aaPredicted RBP8.62□□□□□ -1.03
VAPA-206ENST00000583475 GCGRP47871 477 aa8.62□□□□□ -1.03
VAPA-206ENST00000583475 PARP9Q8IXQ6 854 aa8.62□□□□□ -1.03
VAPA-206ENST00000583475 ACTN4O43707 911 aaKnown RBP8.61□□□□□ -1.03
VAPA-206ENST00000583475 TTLL12Q14166 644 aaPredicted RBP8.61□□□□□ -1.03
VAPA-206ENST00000583475 KMT5BQ4FZB7 885 aa8.61□□□□□ -1.03
VAPA-206ENST00000583475 TJAP1Q5JTD0 557 aa8.61□□□□□ -1.03
VAPA-206ENST00000583475 PRR14Q9BWN1 585 aa8.61□□□□□ -1.03
VAPA-206ENST00000583475 PLA2G2EQ9NZK7 142 aa8.61□□□□□ -1.03
VAPA-206ENST00000583475 ITGBL1O95965 494 aaPredicted RBP8.6□□□□□ -1.03
VAPA-206ENST00000583475 GIGYF2Q6Y7W6 1299 aaKnown RBP8.6□□□□□ -1.03
VAPA-206ENST00000583475 PRKCSHP14314 528 aaPredicted RBP8.59□□□□□ -1.03
VAPA-206ENST00000583475 MTRQ99707 1265 aa8.58□□□□□ -1.04
VAPA-206ENST00000583475 PCDHB3Q9Y5E6 796 aa8.58□□□□□ -1.04
VAPA-206ENST00000583475 FUT2Q10981 343 aa8.57□□□□□ -1.04
VAPA-206ENST00000583475 IFFO2Q5TF58 517 aa8.57□□□□□ -1.04
VAPA-206ENST00000583475 ZNF516Q92618 1163 aa8.57□□□□□ -1.04
VAPA-206ENST00000583475 MS4A1P11836 297 aa8.56□□□□□ -1.04
VAPA-206ENST00000583475 COPS2P61201 443 aa8.56□□□□□ -1.04
VAPA-206ENST00000583475 KCNC4Q03721 635 aa8.56□□□□□ -1.04
VAPA-206ENST00000583475 BLOC1S3Q6QNY0 202 aa8.56□□□□□ -1.04
VAPA-206ENST00000583475 IL21Q9HBE4 155 aa8.56□□□□□ -1.04
VAPA-206ENST00000583475 PUS10Q3MIT2 529 aaKnown RBP8.55□□□□□ -1.04
VAPA-206ENST00000583475 KDM4AO75164 1064 aa8.54□□□□□ -1.04
VAPA-206ENST00000583475 ATP6V1AP38606 617 aa8.54□□□□□ -1.04
VAPA-206ENST00000583475 ZPR1O75312 459 aa8.53□□□□□ -1.04
VAPA-206ENST00000583475 MORN1Q5T089 497 aa8.53□□□□□ -1.04
VAPA-206ENST00000583475 SCUBE3Q8IX30 993 aa8.53□□□□□ -1.04
VAPA-206ENST00000583475 BEGAINQ9BUH8 593 aa8.53□□□□□ -1.04
VAPA-206ENST00000583475 GPBP1L1Q9HC44 474 aaPredicted RBP8.53□□□□□ -1.04
VAPA-206ENST00000583475 NKX2-3Q8TAU0 364 aa8.52□□□□□ -1.05
VAPA-206ENST00000583475 NR1I2O75469 434 aa8.51□□□□□ -1.05
VAPA-206ENST00000583475 SPIRE2Q8WWL2 714 aa8.51□□□□□ -1.05
VAPA-206ENST00000583475 SLC27A5Q9Y2P5 690 aa8.51□□□□□ -1.05
VAPA-206ENST00000583475 USP46P62068 366 aa8.5□□□□□ -1.05
VAPA-206ENST00000583475 NUTM1Q86Y26 1132 aa8.5□□□□□ -1.05
VAPA-206ENST00000583475 KDM4CQ9H3R0 1056 aa8.5□□□□□ -1.05
VAPA-206ENST00000583475 HOXA2O43364 376 aa8.49□□□□□ -1.05
VAPA-206ENST00000583475 GRIPAP1Q4V328 841 aa8.49□□□□□ -1.05
VAPA-206ENST00000583475 HLA-CQ95604 372 aa8.49□□□□□ -1.05
VAPA-206ENST00000583475 THAP11Q96EK4 314 aa8.48□□□□□ -1.05
VAPA-206ENST00000583475 BRPF1P55201 1214 aaPredicted RBP8.47□□□□□ -1.05
VAPA-206ENST00000583475 TBC1D2Q9BYX2 928 aa8.47□□□□□ -1.05
VAPA-206ENST00000583475 A0A0G2JS52 829 aa8.46□□□□□ -1.06
VAPA-206ENST00000583475 TLL1O43897 1013 aa8.46□□□□□ -1.06
VAPA-206ENST00000583475 GUCA2AQ02747 115 aa8.46□□□□□ -1.06
VAPA-206ENST00000583475 BRICD5Q6PL45 260 aa8.46□□□□□ -1.06
VAPA-206ENST00000583475 FAM117AQ9C073 453 aa8.46□□□□□ -1.06
VAPA-206ENST00000583475 SALL2Q9Y467 1007 aaPredicted RBP8.46□□□□□ -1.06
VAPA-206ENST00000583475 MOXD2PA6NHM9 499 aa8.45□□□□□ -1.06
VAPA-206ENST00000583475 NDUFV2P19404 249 aa8.45□□□□□ -1.06
VAPA-206ENST00000583475 NEUROD2Q15784 382 aa8.45□□□□□ -1.06
VAPA-206ENST00000583475 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
VAPA-206ENST00000583475 SPSB2Q99619 263 aa8.44□□□□□ -1.06
VAPA-206ENST00000583475 PCDHGC3Q9UN70 934 aa8.44□□□□□ -1.06
VAPA-206ENST00000583475 FMNL1O95466 1100 aaPredicted RBP8.43□□□□□ -1.06
VAPA-206ENST00000583475 ADH1BP00325 375 aa8.43□□□□□ -1.06
VAPA-206ENST00000583475 FDX1P10109 184 aa8.43□□□□□ -1.06
VAPA-206ENST00000583475 PPP1R18Q6NYC8 613 aa8.43□□□□□ -1.06
VAPA-206ENST00000583475 RNF19BQ6ZMZ0 732 aa8.43□□□□□ -1.06
VAPA-206ENST00000583475 PLEKHG3A1L390 1219 aa8.42□□□□□ -1.06
VAPA-206ENST00000583475 Q3C1V9 767 aa8.42□□□□□ -1.06
VAPA-206ENST00000583475 FAM160A2Q8N612 972 aaPredicted RBP8.42□□□□□ -1.06
VAPA-206ENST00000583475 SPTLC1O15269 473 aa8.41□□□□□ -1.06
VAPA-206ENST00000583475 GJA5P36382 358 aa8.41□□□□□ -1.06
VAPA-206ENST00000583475 MYSM1Q5VVJ2 828 aa8.41□□□□□ -1.06
VAPA-206ENST00000583475 RSBN1LQ6PCB5 846 aaPredicted RBP8.41□□□□□ -1.06
VAPA-206ENST00000583475 SYMPKQ92797 1274 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms